RNA–Protein interactions for RNA: ENST00000449944.5

GGA1-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 5

Gene GGA1, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-214ENST00000449944 RPRD2Q5VT52 1461 aaKnown RBP29.04■■■□□ 2.24
GGA1-214ENST00000449944 ROBO1Q9Y6N7 1651 aa29.04■■■□□ 2.24
GGA1-214ENST00000449944 RGS17Q9UGC6 210 aaPredicted RBP29.03■■■□□ 2.24
GGA1-214ENST00000449944 MYO5BQ9ULV0 1848 aa29.03■■■□□ 2.24
GGA1-214ENST00000449944 NWD1Q149M9 1564 aa29.02■■■□□ 2.24
GGA1-214ENST00000449944 NKTRP30414 1462 aaKnown RBP29.02■■■□□ 2.24
GGA1-214ENST00000449944 GCC2Q8IWJ2 1684 aa29.01■■■□□ 2.23
GGA1-214ENST00000449944 PPP1R15AO75807 674 aaPredicted RBP29■■■□□ 2.23
GGA1-214ENST00000449944 ZFYVE9O95405 1425 aa28.98■■■□□ 2.23
GGA1-214ENST00000449944 MSH6P52701 1360 aa28.98■■■□□ 2.23
GGA1-214ENST00000449944 RIMS2Q9UQ26 1411 aa28.96■■■□□ 2.23
GGA1-214ENST00000449944 PLEKHG1Q9ULL1 1385 aa28.96■■■□□ 2.23
GGA1-214ENST00000449944 CHGAP10645 457 aaKnown RBP28.95■■■□□ 2.22
GGA1-214ENST00000449944 TMEM131LA2VDJ0 1609 aa28.94■■■□□ 2.22
GGA1-214ENST00000449944 UNC13BO14795 1591 aa28.93■■■□□ 2.22
GGA1-214ENST00000449944 HDGFP51858 240 aaKnown RBP28.93■■■□□ 2.22
GGA1-214ENST00000449944 CHD2O14647 1828 aaKnown RBP28.92■■■□□ 2.22
GGA1-214ENST00000449944 SLAIN2Q9P270 581 aa28.9■■■□□ 2.22
GGA1-214ENST00000449944 RRBP1Q9P2E9 1410 aaKnown RBP28.89■■■□□ 2.22
GGA1-214ENST00000449944 NUTM2DQ5VT03 806 aaPredicted RBP28.89■■■□□ 2.22
GGA1-214ENST00000449944 E9PCH4 1651 aa28.89■■■□□ 2.21
GGA1-214ENST00000449944 PHLPP1O60346 1717 aa28.88■■■□□ 2.21
GGA1-214ENST00000449944 POTEAQ6S8J7 498 aa28.86■■■□□ 2.21
GGA1-214ENST00000449944 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.86■■■□□ 2.21
GGA1-214ENST00000449944 TBX22Q9Y458 520 aa28.85■■■□□ 2.21
GGA1-214ENST00000449944 C14orf37Q86TY3 774 aa28.84■■■□□ 2.21
GGA1-214ENST00000449944 ROCK1Q13464 1354 aa28.82■■■□□ 2.2
GGA1-214ENST00000449944 IQGAP3Q86VI3 1631 aa28.82■■■□□ 2.2
GGA1-214ENST00000449944 ADAMTS13Q76LX8 1427 aa28.8■■■□□ 2.2
GGA1-214ENST00000449944 ITGAEP38570 1179 aa28.8■■■□□ 2.2
GGA1-214ENST00000449944 JCADQ9P266 1359 aa28.79■■■□□ 2.2
GGA1-214ENST00000449944 NUP155O75694 1391 aa28.77■■■□□ 2.2
GGA1-214ENST00000449944 DIP2AQ14689 1571 aa28.77■■■□□ 2.2
GGA1-214ENST00000449944 NCOA3Q9Y6Q9 1424 aa28.77■■■□□ 2.2
GGA1-214ENST00000449944 COL16A1Q07092 1604 aaPredicted RBP28.75■■■□□ 2.19
GGA1-214ENST00000449944 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.74■■■□□ 2.19
GGA1-214ENST00000449944 PIK3R4Q99570 1358 aa28.73■■■□□ 2.19
GGA1-214ENST00000449944 ATF3P18847 181 aa28.72■■■□□ 2.19
GGA1-214ENST00000449944 CADPS2Q86UW7 1296 aa28.72■■■□□ 2.19
GGA1-214ENST00000449944 TRPM2O94759 1503 aa28.71■■■□□ 2.19
GGA1-214ENST00000449944 C19orf44Q9H6X5 657 aa28.71■■■□□ 2.19
GGA1-214ENST00000449944 AMOTL2Q9Y2J4 779 aa28.69■■■□□ 2.18
GGA1-214ENST00000449944 PTPRUQ92729 1446 aa28.67■■■□□ 2.18
GGA1-214ENST00000449944 SETD1AO15047 1707 aaKnown RBP28.66■■■□□ 2.18
GGA1-214ENST00000449944 LRP6O75581 1613 aa28.65■■■□□ 2.18
GGA1-214ENST00000449944 AHDC1Q5TGY3 1603 aaPredicted RBP28.65■■■□□ 2.18
GGA1-214ENST00000449944 MEX3CQ5U5Q3 659 aaKnown RBP28.64■■■□□ 2.18
GGA1-214ENST00000449944 SPATA31A6Q5VVP1 1343 aa28.64■■■□□ 2.17
GGA1-214ENST00000449944 SPHKAPQ2M3C7 1700 aa28.63■■■□□ 2.17
GGA1-214ENST00000449944 ZNF326Q5BKZ1 582 aaKnown RBP28.62■■■□□ 2.17
GGA1-214ENST00000449944 NRXN3Q9Y4C0 1643 aa28.61■■■□□ 2.17
GGA1-214ENST00000449944 SHPRHQ149N8 1683 aa28.59■■■□□ 2.17
GGA1-214ENST00000449944 BRINP3Q76B58 766 aa28.59■■■□□ 2.17
GGA1-214ENST00000449944 SETBP1Q9Y6X0 1596 aa28.58■■■□□ 2.17
GGA1-214ENST00000449944 XRN1Q8IZH2 1706 aaKnown RBP28.57■■■□□ 2.16
GGA1-214ENST00000449944 TRIM26Q12899 539 aaPredicted RBP28.56■■■□□ 2.16
GGA1-214ENST00000449944 DCCP43146 1447 aa28.55■■■□□ 2.16
GGA1-214ENST00000449944 METP08581 1390 aa28.54■■■□□ 2.16
GGA1-214ENST00000449944 ZNF772Q68DY9 489 aaPredicted RBP28.54■■■□□ 2.16
GGA1-214ENST00000449944 NUTM2BA6NNL0 878 aaPredicted RBP28.53■■■□□ 2.16
GGA1-214ENST00000449944 NUTM2EB1AL46 878 aaPredicted RBP28.53■■■□□ 2.16
GGA1-214ENST00000449944 NUTM2AQ8IVF1 878 aaPredicted RBP28.53■■■□□ 2.16
GGA1-214ENST00000449944 ASXL1Q8IXJ9 1541 aa28.52■■■□□ 2.16
GGA1-214ENST00000449944 CLTCL1P53675 1640 aa28.51■■■□□ 2.15
GGA1-214ENST00000449944 TRIM52Q96A61 297 aa28.5■■■□□ 2.15
GGA1-214ENST00000449944 MST1RQ04912 1400 aa28.5■■■□□ 2.15
GGA1-214ENST00000449944 NEXMIFQ5QGS0 1516 aa28.48■■■□□ 2.15
GGA1-214ENST00000449944 NHSL1Q5SYE7 1610 aa28.45■■■□□ 2.14
GGA1-214ENST00000449944 SETD5Q9C0A6 1442 aa28.43■■■□□ 2.14
GGA1-214ENST00000449944 ADGRL3Q9HAR2 1447 aa28.43■■■□□ 2.14
GGA1-214ENST00000449944 KIF1BO60333 1816 aa28.43■■■□□ 2.14
GGA1-214ENST00000449944 NALCNQ8IZF0 1738 aa28.43■■■□□ 2.14
GGA1-214ENST00000449944 RXRBP28702 533 aa28.42■■■□□ 2.14
GGA1-214ENST00000449944 DDX17Q92841 729 aaKnown RBP28.42■■■□□ 2.14
GGA1-214ENST00000449944 HFM1A2PYH4 1435 aa28.41■■■□□ 2.14
GGA1-214ENST00000449944 LRRC59Q96AG4 307 aaKnown RBP28.4■■■□□ 2.14
GGA1-214ENST00000449944 AFF2P51816 1311 aa28.4■■■□□ 2.14
GGA1-214ENST00000449944 NAIPQ13075 1403 aa28.39■■■□□ 2.14
GGA1-214ENST00000449944 UPF1Q92900 1129 aaKnown RBP eCLIP28.38■■■□□ 2.13
GGA1-214ENST00000449944 ACIN1Q9UKV3 1341 aaKnown RBP28.35■■■□□ 2.13
GGA1-214ENST00000449944 C8orf37Q96NL8 207 aa28.34■■■□□ 2.13
GGA1-214ENST00000449944 PNPLA6Q8IY17 1366 aa28.34■■■□□ 2.13
GGA1-214ENST00000449944 VGFO15240 615 aaPredicted RBP28.33■■■□□ 2.13
GGA1-214ENST00000449944 C1orf167Q5SNV9 1468 aa28.32■■■□□ 2.12
GGA1-214ENST00000449944 CDK12Q9NYV4 1490 aaPredicted RBP28.3■■■□□ 2.12
GGA1-214ENST00000449944 PTCH1Q13635 1447 aa28.3■■■□□ 2.12
GGA1-214ENST00000449944 ROBO2Q9HCK4 1378 aa28.29■■■□□ 2.12
GGA1-214ENST00000449944 SLC4A1APQ9BWU0 796 aaKnown RBP28.27■■■□□ 2.12
GGA1-214ENST00000449944 ADAMTS2O95450 1211 aa28.26■■■□□ 2.11
GGA1-214ENST00000449944 ORAI2Q96SN7 254 aa28.26■■■□□ 2.11
GGA1-214ENST00000449944 QTRT2Q9H974 415 aaKnown RBP28.26■■■□□ 2.11
GGA1-214ENST00000449944 RPGRIP1LQ68CZ1 1315 aa28.23■■■□□ 2.11
GGA1-214ENST00000449944 PPLO60437 1756 aa28.23■■■□□ 2.11
GGA1-214ENST00000449944 NGLY1Q96IV0 654 aa28.22■■■□□ 2.11
GGA1-214ENST00000449944 LAMC1P11047 1609 aa28.21■■■□□ 2.11
GGA1-214ENST00000449944 RGS12O14924 1447 aa28.21■■■□□ 2.11
GGA1-214ENST00000449944 RBM6P78332 1123 aaKnown RBP28.21■■■□□ 2.11
GGA1-214ENST00000449944 PCGF6Q9BYE7 350 aa28.2■■■□□ 2.1
GGA1-214ENST00000449944 SOS2Q07890 1332 aaPredicted RBP28.19■■■□□ 2.1
GGA1-214ENST00000449944 RAB3GAP2Q9H2M9 1393 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms