RNA–Protein interactions for RNA: ENST00000449713.1

AP001065.1-201, humanhuman

TSL 3 BASIC

Gene AP001065.1, Length 912 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001065.1-201ENST00000449713 DIEXFQ68CQ4 756 aaKnown RBP16.52■□□□□ 0.24
AP001065.1-201ENST00000449713 ZNF316A6NFI3 1004 aaPredicted RBP16.51■□□□□ 0.23
AP001065.1-201ENST00000449713 KCNA6P17658 529 aa16.51■□□□□ 0.23
AP001065.1-201ENST00000449713 FAM50AQ14320 339 aaKnown RBP16.51■□□□□ 0.23
AP001065.1-201ENST00000449713 ANKRD50Q9ULJ7 1429 aa16.5■□□□□ 0.23
AP001065.1-201ENST00000449713 FAM135BQ49AJ0 1406 aa16.49■□□□□ 0.23
AP001065.1-201ENST00000449713 RGS17Q9UGC6 210 aaPredicted RBP16.49■□□□□ 0.23
AP001065.1-201ENST00000449713 MYO5BQ9ULV0 1848 aa16.49■□□□□ 0.23
AP001065.1-201ENST00000449713 PROSER2Q86WR7 435 aaPredicted RBP16.48■□□□□ 0.23
AP001065.1-201ENST00000449713 SLC52A1Q9NWF4 448 aa16.48■□□□□ 0.23
AP001065.1-201ENST00000449713 ZFYVE9O95405 1425 aa16.47■□□□□ 0.23
AP001065.1-201ENST00000449713 RPRD2Q5VT52 1461 aaKnown RBP16.47■□□□□ 0.23
AP001065.1-201ENST00000449713 NWD1Q149M9 1564 aa16.47■□□□□ 0.23
AP001065.1-201ENST00000449713 ROBO1Q9Y6N7 1651 aa16.46■□□□□ 0.23
AP001065.1-201ENST00000449713 GCC2Q8IWJ2 1684 aa16.45■□□□□ 0.22
AP001065.1-201ENST00000449713 NKTRP30414 1462 aaKnown RBP16.44■□□□□ 0.22
AP001065.1-201ENST00000449713 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
AP001065.1-201ENST00000449713 TMEM131LA2VDJ0 1609 aa16.44■□□□□ 0.22
AP001065.1-201ENST00000449713 BCANQ96GW7 911 aa16.43■□□□□ 0.22
AP001065.1-201ENST00000449713 RIMS2Q9UQ26 1411 aa16.43■□□□□ 0.22
AP001065.1-201ENST00000449713 UNC13BO14795 1591 aa16.43■□□□□ 0.22
AP001065.1-201ENST00000449713 CENPBP07199 599 aaPredicted RBP16.42■□□□□ 0.22
AP001065.1-201ENST00000449713 CHD2O14647 1828 aaKnown RBP16.42■□□□□ 0.22
AP001065.1-201ENST00000449713 ACIN1Q9UKV3 1341 aaKnown RBP16.42■□□□□ 0.22
AP001065.1-201ENST00000449713 PLEKHG1Q9ULL1 1385 aa16.41■□□□□ 0.22
AP001065.1-201ENST00000449713 E9PCH4 1651 aa16.4■□□□□ 0.22
AP001065.1-201ENST00000449713 NUTM2DQ5VT03 806 aaPredicted RBP16.39■□□□□ 0.21
AP001065.1-201ENST00000449713 MSH6P52701 1360 aa16.38■□□□□ 0.21
AP001065.1-201ENST00000449713 PPP1R15AO75807 674 aaPredicted RBP16.38■□□□□ 0.21
AP001065.1-201ENST00000449713 POTEAQ6S8J7 498 aa16.38■□□□□ 0.21
AP001065.1-201ENST00000449713 SLAIN2Q9P270 581 aa16.38■□□□□ 0.21
AP001065.1-201ENST00000449713 CHGAP10645 457 aaKnown RBP16.37■□□□□ 0.21
AP001065.1-201ENST00000449713 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
AP001065.1-201ENST00000449713 TBX22Q9Y458 520 aa16.36■□□□□ 0.21
AP001065.1-201ENST00000449713 IQGAP3Q86VI3 1631 aa16.36■□□□□ 0.21
AP001065.1-201ENST00000449713 ROCK1Q13464 1354 aa16.36■□□□□ 0.21
AP001065.1-201ENST00000449713 DHX57Q6P158 1386 aaKnown RBP16.36■□□□□ 0.21
AP001065.1-201ENST00000449713 PHLPP1O60346 1717 aa16.35■□□□□ 0.21
AP001065.1-201ENST00000449713 HDGFP51858 240 aaKnown RBP16.34■□□□□ 0.21
AP001065.1-201ENST00000449713 NUP155O75694 1391 aa16.32■□□□□ 0.2
AP001065.1-201ENST00000449713 ITGAEP38570 1179 aa16.32■□□□□ 0.2
AP001065.1-201ENST00000449713 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.32■□□□□ 0.2
AP001065.1-201ENST00000449713 COL16A1Q07092 1604 aaPredicted RBP16.3■□□□□ 0.2
AP001065.1-201ENST00000449713 PTPRUQ92729 1446 aa16.3■□□□□ 0.2
AP001065.1-201ENST00000449713 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.3■□□□□ 0.2
AP001065.1-201ENST00000449713 DIP2AQ14689 1571 aa16.3■□□□□ 0.2
AP001065.1-201ENST00000449713 NCOA3Q9Y6Q9 1424 aa16.29■□□□□ 0.2
AP001065.1-201ENST00000449713 JCADQ9P266 1359 aa16.29■□□□□ 0.2
AP001065.1-201ENST00000449713 C14orf37Q86TY3 774 aa16.28■□□□□ 0.2
AP001065.1-201ENST00000449713 PIK3R4Q99570 1358 aa16.27■□□□□ 0.2
AP001065.1-201ENST00000449713 C19orf44Q9H6X5 657 aa16.27■□□□□ 0.2
AP001065.1-201ENST00000449713 LRP6O75581 1613 aa16.27■□□□□ 0.19
AP001065.1-201ENST00000449713 NRXN3Q9Y4C0 1643 aa16.27■□□□□ 0.19
AP001065.1-201ENST00000449713 AMOTL2Q9Y2J4 779 aa16.26■□□□□ 0.19
AP001065.1-201ENST00000449713 SETD1AO15047 1707 aaKnown RBP16.25■□□□□ 0.19
AP001065.1-201ENST00000449713 TRPM2O94759 1503 aa16.25■□□□□ 0.19
AP001065.1-201ENST00000449713 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
AP001065.1-201ENST00000449713 CADPS2Q86UW7 1296 aa16.25■□□□□ 0.19
AP001065.1-201ENST00000449713 SPHKAPQ2M3C7 1700 aa16.24■□□□□ 0.19
AP001065.1-201ENST00000449713 AHDC1Q5TGY3 1603 aaPredicted RBP16.23■□□□□ 0.19
AP001065.1-201ENST00000449713 ATF3P18847 181 aa16.23■□□□□ 0.19
AP001065.1-201ENST00000449713 XRN1Q8IZH2 1706 aaKnown RBP16.22■□□□□ 0.19
AP001065.1-201ENST00000449713 SETBP1Q9Y6X0 1596 aa16.22■□□□□ 0.19
AP001065.1-201ENST00000449713 BRINP3Q76B58 766 aa16.22■□□□□ 0.19
AP001065.1-201ENST00000449713 METP08581 1390 aa16.21■□□□□ 0.19
AP001065.1-201ENST00000449713 SHPRHQ149N8 1683 aa16.2■□□□□ 0.18
AP001065.1-201ENST00000449713 SPATA31A6Q5VVP1 1343 aa16.19■□□□□ 0.18
AP001065.1-201ENST00000449713 CLTCL1P53675 1640 aa16.19■□□□□ 0.18
AP001065.1-201ENST00000449713 ZNF326Q5BKZ1 582 aaKnown RBP16.19■□□□□ 0.18
AP001065.1-201ENST00000449713 DCCP43146 1447 aa16.18■□□□□ 0.18
AP001065.1-201ENST00000449713 NEXMIFQ5QGS0 1516 aa16.17■□□□□ 0.18
AP001065.1-201ENST00000449713 ASXL1Q8IXJ9 1541 aa16.17■□□□□ 0.18
AP001065.1-201ENST00000449713 MST1RQ04912 1400 aa16.17■□□□□ 0.18
AP001065.1-201ENST00000449713 MEX3CQ5U5Q3 659 aaKnown RBP16.16■□□□□ 0.18
AP001065.1-201ENST00000449713 SETD5Q9C0A6 1442 aa16.15■□□□□ 0.18
AP001065.1-201ENST00000449713 NAIPQ13075 1403 aa16.14■□□□□ 0.17
AP001065.1-201ENST00000449713 NUTM2BA6NNL0 878 aaPredicted RBP16.14■□□□□ 0.17
AP001065.1-201ENST00000449713 NUTM2EB1AL46 878 aaPredicted RBP16.14■□□□□ 0.17
AP001065.1-201ENST00000449713 NUTM2AQ8IVF1 878 aaPredicted RBP16.14■□□□□ 0.17
AP001065.1-201ENST00000449713 DDX17Q92841 729 aaKnown RBP16.14■□□□□ 0.17
AP001065.1-201ENST00000449713 NHSL1Q5SYE7 1610 aa16.13■□□□□ 0.17
AP001065.1-201ENST00000449713 NALCNQ8IZF0 1738 aa16.13■□□□□ 0.17
AP001065.1-201ENST00000449713 ADGRL3Q9HAR2 1447 aa16.12■□□□□ 0.17
AP001065.1-201ENST00000449713 ZNF772Q68DY9 489 aaPredicted RBP16.12■□□□□ 0.17
AP001065.1-201ENST00000449713 TRIM52Q96A61 297 aa16.12■□□□□ 0.17
AP001065.1-201ENST00000449713 KIF1BO60333 1816 aa16.11■□□□□ 0.17
AP001065.1-201ENST00000449713 TIMELESSQ9UNS1 1208 aa16.11■□□□□ 0.17
AP001065.1-201ENST00000449713 RAB3GAP2Q9H2M9 1393 aa16.11■□□□□ 0.17
AP001065.1-201ENST00000449713 MIER1Q8N108 512 aa16.09■□□□□ 0.17
AP001065.1-201ENST00000449713 UPF1Q92900 1129 aaKnown RBP eCLIP16.08■□□□□ 0.16
AP001065.1-201ENST00000449713 GTF3C3Q9Y5Q9 886 aa16.08■□□□□ 0.16
AP001065.1-201ENST00000449713 AFF2P51816 1311 aa16.08■□□□□ 0.16
AP001065.1-201ENST00000449713 RXRBP28702 533 aa16.07■□□□□ 0.16
AP001065.1-201ENST00000449713 LRRC59Q96AG4 307 aaKnown RBP16.07■□□□□ 0.16
AP001065.1-201ENST00000449713 PNPLA6Q8IY17 1366 aa16.07■□□□□ 0.16
AP001065.1-201ENST00000449713 ROBO2Q9HCK4 1378 aa16.07■□□□□ 0.16
AP001065.1-201ENST00000449713 C1orf167Q5SNV9 1468 aa16.06■□□□□ 0.16
AP001065.1-201ENST00000449713 PTCH1Q13635 1447 aa16.05■□□□□ 0.16
AP001065.1-201ENST00000449713 HFM1A2PYH4 1435 aa16.04■□□□□ 0.16
AP001065.1-201ENST00000449713 C8orf37Q96NL8 207 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms