RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 SPHKAPQ2M3C7 1700 aa23.19■■□□□ 1.3
TOP3B-211ENST00000449704 TRPM2O94759 1503 aa23.18■■□□□ 1.3
TOP3B-211ENST00000449704 KDM5AP29375 1690 aaKnown RBP23.17■■□□□ 1.3
TOP3B-211ENST00000449704 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.17■■□□□ 1.3
TOP3B-211ENST00000449704 TMEM131LA2VDJ0 1609 aa23.17■■□□□ 1.3
TOP3B-211ENST00000449704 POLR1AO95602 1720 aaPredicted RBP23.16■■□□□ 1.3
TOP3B-211ENST00000449704 CLTCL1P53675 1640 aa23.14■■□□□ 1.29
TOP3B-211ENST00000449704 ZFYVE9O95405 1425 aa23.14■■□□□ 1.29
TOP3B-211ENST00000449704 SLC26A8Q96RN1 970 aa23.13■■□□□ 1.29
TOP3B-211ENST00000449704 CCDC144AA2RUR9 1427 aa23.12■■□□□ 1.29
TOP3B-211ENST00000449704 IQGAP1P46940 1657 aa23.1■■□□□ 1.29
TOP3B-211ENST00000449704 ILDR2Q71H61 639 aa23.1■■□□□ 1.29
TOP3B-211ENST00000449704 PLEKHG1Q9ULL1 1385 aa23.08■■□□□ 1.29
TOP3B-211ENST00000449704 MYO5BQ9ULV0 1848 aa23.08■■□□□ 1.28
TOP3B-211ENST00000449704 RGL3Q3MIN7 710 aa23.07■■□□□ 1.28
TOP3B-211ENST00000449704 LTBP4Q8N2S1 1624 aa23.05■■□□□ 1.28
TOP3B-211ENST00000449704 SOCS7O14512 581 aa23.05■■□□□ 1.28
TOP3B-211ENST00000449704 ANKRD30BQ9BXX2 1392 aa23.04■■□□□ 1.28
TOP3B-211ENST00000449704 DISP3Q9P2K9 1392 aa23.04■■□□□ 1.28
TOP3B-211ENST00000449704 RPGRIP1LQ68CZ1 1315 aa23.04■■□□□ 1.28
TOP3B-211ENST00000449704 VGFO15240 615 aaPredicted RBP23.01■■□□□ 1.27
TOP3B-211ENST00000449704 TBX22Q9Y458 520 aa23.01■■□□□ 1.27
TOP3B-211ENST00000449704 KIF1BO60333 1816 aa22.99■■□□□ 1.27
TOP3B-211ENST00000449704 KCNA6P17658 529 aa22.99■■□□□ 1.27
TOP3B-211ENST00000449704 SPATA31E1Q6ZUB1 1445 aa22.98■■□□□ 1.27
TOP3B-211ENST00000449704 NEXMIFQ5QGS0 1516 aa22.97■■□□□ 1.27
TOP3B-211ENST00000449704 ADAMTS13Q76LX8 1427 aa22.96■■□□□ 1.27
TOP3B-211ENST00000449704 CPS1P31327 1500 aa22.96■■□□□ 1.27
TOP3B-211ENST00000449704 PCGF6Q9BYE7 350 aa22.92■■□□□ 1.26
TOP3B-211ENST00000449704 ADGRF5Q8IZF2 1346 aa22.91■■□□□ 1.26
TOP3B-211ENST00000449704 PROSER2Q86WR7 435 aaPredicted RBP22.91■■□□□ 1.26
TOP3B-211ENST00000449704 IQSEC2Q5JU85 1478 aa22.89■■□□□ 1.25
TOP3B-211ENST00000449704 LRRC7Q96NW7 1537 aa22.88■■□□□ 1.25
TOP3B-211ENST00000449704 UBAP1LF5GYI3 381 aa22.88■■□□□ 1.25
TOP3B-211ENST00000449704 RBM33Q96EV2 1170 aaKnown RBP22.88■■□□□ 1.25
TOP3B-211ENST00000449704 AMOTL2Q9Y2J4 779 aa22.88■■□□□ 1.25
TOP3B-211ENST00000449704 SETBP1Q9Y6X0 1596 aa22.88■■□□□ 1.25
TOP3B-211ENST00000449704 PIK3R4Q99570 1358 aa22.88■■□□□ 1.25
TOP3B-211ENST00000449704 METP08581 1390 aa22.87■■□□□ 1.25
TOP3B-211ENST00000449704 DIP2AQ14689 1571 aa22.86■■□□□ 1.25
TOP3B-211ENST00000449704 KDM2AQ9Y2K7 1162 aa22.86■■□□□ 1.25
TOP3B-211ENST00000449704 DHX57Q6P158 1386 aaKnown RBP22.86■■□□□ 1.25
TOP3B-211ENST00000449704 STRCP1A6NGW2 1772 aa22.86■■□□□ 1.25
TOP3B-211ENST00000449704 DCAF11Q8TEB1 546 aa22.85■■□□□ 1.25
TOP3B-211ENST00000449704 TMEM94Q12767 1356 aa22.85■■□□□ 1.25
TOP3B-211ENST00000449704 PTPRUQ92729 1446 aa22.83■■□□□ 1.25
TOP3B-211ENST00000449704 NRXN3Q9Y4C0 1643 aa22.82■■□□□ 1.24
TOP3B-211ENST00000449704 PPLO60437 1756 aa22.82■■□□□ 1.24
TOP3B-211ENST00000449704 TOM1O60784 492 aa22.82■■□□□ 1.24
TOP3B-211ENST00000449704 SIN3AQ96ST3 1273 aa22.82■■□□□ 1.24
TOP3B-211ENST00000449704 NKTRP30414 1462 aaKnown RBP22.81■■□□□ 1.24
TOP3B-211ENST00000449704 NEUROD1Q13562 356 aa22.81■■□□□ 1.24
TOP3B-211ENST00000449704 NWD1Q149M9 1564 aa22.8■■□□□ 1.24
TOP3B-211ENST00000449704 C14orf37Q86TY3 774 aa22.79■■□□□ 1.24
TOP3B-211ENST00000449704 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
TOP3B-211ENST00000449704 ALKQ9UM73 1620 aa22.79■■□□□ 1.24
TOP3B-211ENST00000449704 PIP4K2BP78356 416 aa22.78■■□□□ 1.24
TOP3B-211ENST00000449704 PIK3C2GO75747 1445 aa22.76■■□□□ 1.23
TOP3B-211ENST00000449704 CFAP70Q5T0N1 1121 aa22.76■■□□□ 1.23
TOP3B-211ENST00000449704 TMEM132EQ6IEE7 984 aa22.76■■□□□ 1.23
TOP3B-211ENST00000449704 STAC3Q96MF2 364 aa22.76■■□□□ 1.23
TOP3B-211ENST00000449704 MYOM2P54296 1465 aa22.76■■□□□ 1.23
TOP3B-211ENST00000449704 CHD2O14647 1828 aaKnown RBP22.75■■□□□ 1.23
TOP3B-211ENST00000449704 C14orf93Q9H972 538 aaKnown RBP22.75■■□□□ 1.23
TOP3B-211ENST00000449704 STK26Q9P289 416 aa22.74■■□□□ 1.23
TOP3B-211ENST00000449704 MSH6P52701 1360 aa22.73■■□□□ 1.23
TOP3B-211ENST00000449704 IFT172Q9UG01 1749 aa22.72■■□□□ 1.23
TOP3B-211ENST00000449704 NRXN1Q9ULB1 1477 aa22.72■■□□□ 1.23
TOP3B-211ENST00000449704 L3MBTL2Q969R5 705 aa22.7■■□□□ 1.22
TOP3B-211ENST00000449704 NCOA3Q9Y6Q9 1424 aa22.7■■□□□ 1.22
TOP3B-211ENST00000449704 C19orf44Q9H6X5 657 aa22.69■■□□□ 1.22
TOP3B-211ENST00000449704 ROBO2Q9HCK4 1378 aa22.68■■□□□ 1.22
TOP3B-211ENST00000449704 LRPPRCP42704 1394 aaKnown RBP22.67■■□□□ 1.22
TOP3B-211ENST00000449704 XRN1Q8IZH2 1706 aaKnown RBP22.67■■□□□ 1.22
TOP3B-211ENST00000449704 ATF3P18847 181 aa22.66■■□□□ 1.22
TOP3B-211ENST00000449704 SETD1AO15047 1707 aaKnown RBP22.65■■□□□ 1.22
TOP3B-211ENST00000449704 XIRP1Q702N8 1843 aaKnown RBP22.64■■□□□ 1.22
TOP3B-211ENST00000449704 CADPS2Q86UW7 1296 aa22.64■■□□□ 1.21
TOP3B-211ENST00000449704 PTCH1Q13635 1447 aa22.64■■□□□ 1.21
TOP3B-211ENST00000449704 YTHDC2Q9H6S0 1430 aaKnown RBP22.64■■□□□ 1.21
TOP3B-211ENST00000449704 ABCC11Q96J66 1382 aa22.63■■□□□ 1.21
TOP3B-211ENST00000449704 WAPLQ7Z5K2 1190 aa22.63■■□□□ 1.21
TOP3B-211ENST00000449704 SLAIN2Q9P270 581 aa22.63■■□□□ 1.21
TOP3B-211ENST00000449704 ASXL1Q8IXJ9 1541 aa22.62■■□□□ 1.21
TOP3B-211ENST00000449704 PRAG1Q86YV5 1406 aa22.59■■□□□ 1.21
TOP3B-211ENST00000449704 TRAK1Q9UPV9 953 aa22.59■■□□□ 1.21
TOP3B-211ENST00000449704 TECPR2O15040 1411 aa22.58■■□□□ 1.21
TOP3B-211ENST00000449704 ADGRL3Q9HAR2 1447 aa22.58■■□□□ 1.21
TOP3B-211ENST00000449704 TONSLQ96HA7 1378 aa22.58■■□□□ 1.21
TOP3B-211ENST00000449704 HSPA1LP34931 641 aa22.57■■□□□ 1.2
TOP3B-211ENST00000449704 SIRT1Q96EB6 747 aa22.57■■□□□ 1.2
TOP3B-211ENST00000449704 PLEKHH1Q9ULM0 1364 aa22.57■■□□□ 1.2
TOP3B-211ENST00000449704 SAFB2Q14151 953 aaKnown RBP eCLIP22.56■■□□□ 1.2
TOP3B-211ENST00000449704 NBPF1Q3BBV0 1214 aa22.56■■□□□ 1.2
TOP3B-211ENST00000449704 PRAM1Q96QH2 718 aa22.56■■□□□ 1.2
TOP3B-211ENST00000449704 POGKQ9P215 609 aa22.56■■□□□ 1.2
TOP3B-211ENST00000449704 LAMC1P11047 1609 aa22.56■■□□□ 1.2
TOP3B-211ENST00000449704 FAM135BQ49AJ0 1406 aa22.55■■□□□ 1.2
TOP3B-211ENST00000449704 CCER1Q8TC90 406 aaPredicted RBP22.54■■□□□ 1.2
TOP3B-211ENST00000449704 DCCP43146 1447 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms