RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-222	ENST00000449504	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.52	□□□□□ -0.56
HDLBP-222	ENST00000449504	ATF3	P18847	181 aa		11.52	□□□□□ -0.57
HDLBP-222	ENST00000449504	C8orf37	Q96NL8	207 aa		11.52	□□□□□ -0.57
HDLBP-222	ENST00000449504	MROH1	Q8NDA8	1641 aa		11.52	□□□□□ -0.57
HDLBP-222	ENST00000449504	TET3	O43151	1660 aa		11.52	□□□□□ -0.57
HDLBP-222	ENST00000449504	EFCAB6	Q5THR3	1501 aa		11.51	□□□□□ -0.57
HDLBP-222	ENST00000449504	ARHGEF5	Q12774	1597 aa		11.51	□□□□□ -0.57
HDLBP-222	ENST00000449504	RBM6	P78332	1123 aa	Known RBP	11.51	□□□□□ -0.57
HDLBP-222	ENST00000449504	ARHGAP31	Q2M1Z3	1444 aa		11.51	□□□□□ -0.57
HDLBP-222	ENST00000449504	PPP1R15A	O75807	674 aa	Predicted RBP	11.5	□□□□□ -0.57
HDLBP-222	ENST00000449504	CADPS2	Q86UW7	1296 aa		11.5	□□□□□ -0.57
HDLBP-222	ENST00000449504	RGS12	O14924	1447 aa		11.5	□□□□□ -0.57
HDLBP-222	ENST00000449504	RRP7BP	Q9NSQ0	103 aa		11.49	□□□□□ -0.57
HDLBP-222	ENST00000449504	NWD1	Q149M9	1564 aa		11.49	□□□□□ -0.57
HDLBP-222	ENST00000449504	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.49	□□□□□ -0.57
HDLBP-222	ENST00000449504	BRINP3	Q76B58	766 aa		11.48	□□□□□ -0.57
HDLBP-222	ENST00000449504	C19orf44	Q9H6X5	657 aa		11.48	□□□□□ -0.57
HDLBP-222	ENST00000449504	KANK1	Q14678	1352 aa		11.47	□□□□□ -0.57
HDLBP-222	ENST00000449504	KDM5A	P29375	1690 aa	Known RBP	11.46	□□□□□ -0.57
HDLBP-222	ENST00000449504	SHPRH	Q149N8	1683 aa		11.46	□□□□□ -0.57
HDLBP-222	ENST00000449504	DUOX2	Q9NRD8	1548 aa		11.46	□□□□□ -0.57
HDLBP-222	ENST00000449504	ATAD2	Q6PL18	1390 aa		11.46	□□□□□ -0.57
HDLBP-222	ENST00000449504	ADAMTS2	O95450	1211 aa		11.46	□□□□□ -0.57
HDLBP-222	ENST00000449504	NGLY1	Q96IV0	654 aa		11.46	□□□□□ -0.57
HDLBP-222	ENST00000449504	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.46	□□□□□ -0.58
HDLBP-222	ENST00000449504	MAST1	Q9Y2H9	1570 aa		11.45	□□□□□ -0.58
HDLBP-222	ENST00000449504	SETBP1	Q9Y6X0	1596 aa		11.45	□□□□□ -0.58
HDLBP-222	ENST00000449504	KIF15	Q9NS87	1388 aa		11.45	□□□□□ -0.58
HDLBP-222	ENST00000449504	HDGF	P51858	240 aa	Known RBP	11.45	□□□□□ -0.58
HDLBP-222	ENST00000449504	CHGA	P10645	457 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-222	ENST00000449504	LRRC59	Q96AG4	307 aa	Known RBP	11.44	□□□□□ -0.58
HDLBP-222	ENST00000449504	SLC52A1	Q9NWF4	448 aa		11.44	□□□□□ -0.58
HDLBP-222	ENST00000449504	TBX22	Q9Y458	520 aa		11.44	□□□□□ -0.58
HDLBP-222	ENST00000449504	NCOA3	Q9Y6Q9	1424 aa		11.43	□□□□□ -0.58
HDLBP-222	ENST00000449504	PLEKHG1	Q9ULL1	1385 aa		11.43	□□□□□ -0.58
HDLBP-222	ENST00000449504	DDX17	Q92841	729 aa	Known RBP	11.43	□□□□□ -0.58
HDLBP-222	ENST00000449504	DIP2A	Q14689	1571 aa		11.41	□□□□□ -0.58
HDLBP-222	ENST00000449504	ADGRB3	O60242	1522 aa		11.41	□□□□□ -0.58
HDLBP-222	ENST00000449504	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.41	□□□□□ -0.58
HDLBP-222	ENST00000449504	USP21	Q9UK80	565 aa		11.41	□□□□□ -0.58
HDLBP-222	ENST00000449504	RIMS2	Q9UQ26	1411 aa		11.41	□□□□□ -0.58
HDLBP-222	ENST00000449504	CHD2	O14647	1828 aa	Known RBP	11.4	□□□□□ -0.58
HDLBP-222	ENST00000449504	AMOTL2	Q9Y2J4	779 aa		11.4	□□□□□ -0.58
HDLBP-222	ENST00000449504	MYOM3	Q5VTT5	1437 aa		11.4	□□□□□ -0.58
HDLBP-222	ENST00000449504	ERBIN	Q96RT1	1412 aa		11.4	□□□□□ -0.58
HDLBP-222	ENST00000449504	SETD5	Q9C0A6	1442 aa		11.4	□□□□□ -0.58
HDLBP-222	ENST00000449504	SRCAP	Q6ZRS2	3230 aa		11.4	□□□□□ -0.58
HDLBP-222	ENST00000449504	NOS1	P29475	1434 aa		11.39	□□□□□ -0.59
HDLBP-222	ENST00000449504	CHIC2	Q9UKJ5	165 aa		11.39	□□□□□ -0.59
HDLBP-222	ENST00000449504	TRPC5	Q9UL62	973 aa	Predicted RBP	11.39	□□□□□ -0.59
HDLBP-222	ENST00000449504	ZFYVE9	O95405	1425 aa		11.38	□□□□□ -0.59
HDLBP-222	ENST00000449504	CCDC125	Q86Z20	511 aa		11.38	□□□□□ -0.59
HDLBP-222	ENST00000449504	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
HDLBP-222	ENST00000449504	PNPLA6	Q8IY17	1366 aa		11.38	□□□□□ -0.59
HDLBP-222	ENST00000449504	ASXL1	Q8IXJ9	1541 aa		11.37	□□□□□ -0.59
HDLBP-222	ENST00000449504	KANK4	Q5T7N3	995 aa	Predicted RBP	11.36	□□□□□ -0.59
HDLBP-222	ENST00000449504	ABCC5	O15440	1437 aa		11.35	□□□□□ -0.59
HDLBP-222	ENST00000449504	ADAMTS13	Q76LX8	1427 aa		11.35	□□□□□ -0.59
HDLBP-222	ENST00000449504	LMTK2	Q8IWU2	1503 aa		11.35	□□□□□ -0.59
HDLBP-222	ENST00000449504	MST1R	Q04912	1400 aa		11.34	□□□□□ -0.59
HDLBP-222	ENST00000449504	PIK3R4	Q99570	1358 aa		11.33	□□□□□ -0.6
HDLBP-222	ENST00000449504	DEFB132	Q7Z7B7	95 aa		11.33	□□□□□ -0.6
HDLBP-222	ENST00000449504	PTPRU	Q92729	1446 aa		11.33	□□□□□ -0.6
HDLBP-222	ENST00000449504	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.32	□□□□□ -0.6
HDLBP-222	ENST00000449504	ANKRD30A	Q9BXX3	1397 aa		11.31	□□□□□ -0.6
HDLBP-222	ENST00000449504	DCAF8L1	A6NGE4	600 aa		11.31	□□□□□ -0.6
HDLBP-222	ENST00000449504	SF3B2	Q13435	895 aa	Known RBP	11.31	□□□□□ -0.6
HDLBP-222	ENST00000449504	DCC	P43146	1447 aa		11.31	□□□□□ -0.6
HDLBP-222	ENST00000449504	NHSL1	Q5SYE7	1610 aa		11.31	□□□□□ -0.6
HDLBP-222	ENST00000449504	ATRN	O75882	1429 aa		11.3	□□□□□ -0.6
HDLBP-222	ENST00000449504	DAPK1	P53355	1430 aa		11.3	□□□□□ -0.6
HDLBP-222	ENST00000449504	MYO5B	Q9ULV0	1848 aa		11.3	□□□□□ -0.6
HDLBP-222	ENST00000449504	GCC2	Q8IWJ2	1684 aa		11.3	□□□□□ -0.6
HDLBP-222	ENST00000449504	TMEM131L	A2VDJ0	1609 aa		11.29	□□□□□ -0.6
HDLBP-222	ENST00000449504	PSD	A5PKW4	1024 aa	Predicted RBP	11.29	□□□□□ -0.6
HDLBP-222	ENST00000449504	GJD4	Q96KN9	370 aa	Predicted RBP	11.29	□□□□□ -0.6
HDLBP-222	ENST00000449504	TRPM2	O94759	1503 aa		11.29	□□□□□ -0.6
HDLBP-222	ENST00000449504	ORAI2	Q96SN7	254 aa		11.28	□□□□□ -0.6
HDLBP-222	ENST00000449504	BLM	P54132	1417 aa	Predicted RBP	11.27	□□□□□ -0.6
HDLBP-222	ENST00000449504	RPRD2	Q5VT52	1461 aa	Known RBP	11.27	□□□□□ -0.6
HDLBP-222	ENST00000449504	PTCH1	Q13635	1447 aa		11.26	□□□□□ -0.61
HDLBP-222	ENST00000449504	SOS2	Q07890	1332 aa	Predicted RBP	11.26	□□□□□ -0.61
HDLBP-222	ENST00000449504	CROCC2	H7BZ55	1655 aa		11.26	□□□□□ -0.61
HDLBP-222	ENST00000449504	ADGRL3	Q9HAR2	1447 aa		11.25	□□□□□ -0.61
HDLBP-222	ENST00000449504	C1orf167	Q5SNV9	1468 aa		11.25	□□□□□ -0.61
HDLBP-222	ENST00000449504	BCL9L	Q86UU0	1499 aa		11.25	□□□□□ -0.61
HDLBP-222	ENST00000449504	PTPN23	Q9H3S7	1636 aa		11.24	□□□□□ -0.61
HDLBP-222	ENST00000449504	HRC	P23327	699 aa		11.24	□□□□□ -0.61
HDLBP-222	ENST00000449504	ZNF326	Q5BKZ1	582 aa	Known RBP	11.24	□□□□□ -0.61
HDLBP-222	ENST00000449504	MET	P08581	1390 aa		11.24	□□□□□ -0.61
HDLBP-222	ENST00000449504	XPC	Q01831	940 aa	Predicted RBP	11.22	□□□□□ -0.61
HDLBP-222	ENST00000449504	VPS8	Q8N3P4	1428 aa		11.22	□□□□□ -0.61
HDLBP-222	ENST00000449504	LRP5	O75197	1615 aa		11.21	□□□□□ -0.61
HDLBP-222	ENST00000449504	UNC13B	O14795	1591 aa		11.21	□□□□□ -0.61
HDLBP-222	ENST00000449504	ANKRD50	Q9ULJ7	1429 aa		11.21	□□□□□ -0.61
HDLBP-222	ENST00000449504	YY1	P25490	414 aa		11.21	□□□□□ -0.61
HDLBP-222	ENST00000449504	UNC5CL	Q8IV45	518 aa		11.21	□□□□□ -0.61
HDLBP-222	ENST00000449504	SEPT12	Q8IYM1	358 aa		11.21	□□□□□ -0.61
HDLBP-222	ENST00000449504	XRN1	Q8IZH2	1706 aa	Known RBP	11.21	□□□□□ -0.62
HDLBP-222	ENST00000449504	BAG6	P46379	1132 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms