RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 PPP1R15AO75807 674 aaPredicted RBP30.39■■■□□ 2.46
PTX4-203ENST00000447419 CERKQ8TCT0 537 aa30.39■■■□□ 2.46
PTX4-203ENST00000447419 SLC26A8Q96RN1 970 aa30.37■■■□□ 2.45
PTX4-203ENST00000447419 ZFYVE9O95405 1425 aa30.36■■■□□ 2.45
PTX4-203ENST00000447419 LTBP4Q8N2S1 1624 aa30.35■■■□□ 2.45
PTX4-203ENST00000447419 ACIN1Q9UKV3 1341 aaKnown RBP30.29■■■□□ 2.44
PTX4-203ENST00000447419 HDGFP51858 240 aaKnown RBP30.28■■■□□ 2.44
PTX4-203ENST00000447419 CCDC144AA2RUR9 1427 aa30.28■■■□□ 2.44
PTX4-203ENST00000447419 TRIM26Q12899 539 aaPredicted RBP30.27■■■□□ 2.44
PTX4-203ENST00000447419 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.27■■■□□ 2.44
PTX4-203ENST00000447419 HRCP23327 699 aa30.26■■■□□ 2.43
PTX4-203ENST00000447419 RGL3Q3MIN7 710 aa30.26■■■□□ 2.43
PTX4-203ENST00000447419 ILDR1Q86SU0 546 aaPredicted RBP30.26■■■□□ 2.43
PTX4-203ENST00000447419 PLEKHG1Q9ULL1 1385 aa30.24■■■□□ 2.43
PTX4-203ENST00000447419 KIF1BO60333 1816 aa30.2■■■□□ 2.42
PTX4-203ENST00000447419 NEXMIFQ5QGS0 1516 aa30.18■■■□□ 2.42
PTX4-203ENST00000447419 FBXO41Q8TF61 875 aa30.17■■■□□ 2.42
PTX4-203ENST00000447419 STRCP1A6NGW2 1772 aa30.16■■■□□ 2.42
PTX4-203ENST00000447419 RBM33Q96EV2 1170 aaKnown RBP30.15■■■□□ 2.42
PTX4-203ENST00000447419 ANKRD30BQ9BXX2 1392 aa30.14■■■□□ 2.42
PTX4-203ENST00000447419 ADAMTS13Q76LX8 1427 aa30.14■■■□□ 2.42
PTX4-203ENST00000447419 CPS1P31327 1500 aa30.13■■■□□ 2.41
PTX4-203ENST00000447419 SPATA31E1Q6ZUB1 1445 aa30.12■■■□□ 2.41
PTX4-203ENST00000447419 KCNA6P17658 529 aa30.09■■■□□ 2.41
PTX4-203ENST00000447419 TBX22Q9Y458 520 aa30.09■■■□□ 2.41
PTX4-203ENST00000447419 LRRC7Q96NW7 1537 aa30.08■■■□□ 2.41
PTX4-203ENST00000447419 VGFO15240 615 aaPredicted RBP30.06■■■□□ 2.4
PTX4-203ENST00000447419 RPGRIP1LQ68CZ1 1315 aa30.06■■■□□ 2.4
PTX4-203ENST00000447419 NRXN3Q9Y4C0 1643 aa30.05■■■□□ 2.4
PTX4-203ENST00000447419 ADGRF5Q8IZF2 1346 aa30.05■■■□□ 2.4
PTX4-203ENST00000447419 UBAP1LF5GYI3 381 aa30.05■■■□□ 2.4
PTX4-203ENST00000447419 PROSER2Q86WR7 435 aaPredicted RBP30.03■■■□□ 2.4
PTX4-203ENST00000447419 METP08581 1390 aa30.02■■■□□ 2.4
PTX4-203ENST00000447419 SETBP1Q9Y6X0 1596 aa30.02■■■□□ 2.4
PTX4-203ENST00000447419 PTPRUQ92729 1446 aa30■■■□□ 2.39
PTX4-203ENST00000447419 IQSEC2Q5JU85 1478 aa30■■■□□ 2.39
PTX4-203ENST00000447419 PPLO60437 1756 aa30■■■□□ 2.39
PTX4-203ENST00000447419 TMEM94Q12767 1356 aa29.99■■■□□ 2.39
PTX4-203ENST00000447419 DIP2AQ14689 1571 aa29.98■■■□□ 2.39
PTX4-203ENST00000447419 AMOTL2Q9Y2J4 779 aa29.98■■■□□ 2.39
PTX4-203ENST00000447419 SCAF1Q9H7N4 1312 aaKnown RBP29.97■■■□□ 2.39
PTX4-203ENST00000447419 PIP4K2BP78356 416 aa29.96■■■□□ 2.39
PTX4-203ENST00000447419 PCGF6Q9BYE7 350 aa29.96■■■□□ 2.39
PTX4-203ENST00000447419 NWD1Q149M9 1564 aa29.96■■■□□ 2.39
PTX4-203ENST00000447419 KDM2AQ9Y2K7 1162 aa29.95■■■□□ 2.38
PTX4-203ENST00000447419 NKTRP30414 1462 aaKnown RBP29.92■■■□□ 2.38
PTX4-203ENST00000447419 CHD2O14647 1828 aaKnown RBP29.92■■■□□ 2.38
PTX4-203ENST00000447419 DHX57Q6P158 1386 aaKnown RBP29.92■■■□□ 2.38
PTX4-203ENST00000447419 ALKQ9UM73 1620 aa29.91■■■□□ 2.38
PTX4-203ENST00000447419 PIK3R4Q99570 1358 aa29.91■■■□□ 2.38
PTX4-203ENST00000447419 DCAF11Q8TEB1 546 aa29.91■■■□□ 2.38
PTX4-203ENST00000447419 SIN3AQ96ST3 1273 aa29.91■■■□□ 2.38
PTX4-203ENST00000447419 IFT172Q9UG01 1749 aa29.9■■■□□ 2.38
PTX4-203ENST00000447419 C14orf37Q86TY3 774 aa29.89■■■□□ 2.38
PTX4-203ENST00000447419 TOM1O60784 492 aa29.88■■■□□ 2.37
PTX4-203ENST00000447419 XIRP1Q702N8 1843 aaKnown RBP29.88■■■□□ 2.37
PTX4-203ENST00000447419 NEUROD1Q13562 356 aa29.87■■■□□ 2.37
PTX4-203ENST00000447419 TMEM132EQ6IEE7 984 aa29.87■■■□□ 2.37
PTX4-203ENST00000447419 PIK3C2GO75747 1445 aa29.86■■■□□ 2.37
PTX4-203ENST00000447419 STK26Q9P289 416 aa29.84■■■□□ 2.37
PTX4-203ENST00000447419 CFAP70Q5T0N1 1121 aa29.83■■■□□ 2.37
PTX4-203ENST00000447419 SETD1AO15047 1707 aaKnown RBP29.83■■■□□ 2.37
PTX4-203ENST00000447419 MYOM2P54296 1465 aa29.81■■■□□ 2.36
PTX4-203ENST00000447419 XRN1Q8IZH2 1706 aaKnown RBP29.81■■■□□ 2.36
PTX4-203ENST00000447419 MSH6P52701 1360 aa29.79■■■□□ 2.36
PTX4-203ENST00000447419 ROBO2Q9HCK4 1378 aa29.78■■■□□ 2.36
PTX4-203ENST00000447419 NRXN1Q9ULB1 1477 aa29.78■■■□□ 2.36
PTX4-203ENST00000447419 C14orf93Q9H972 538 aaKnown RBP29.76■■■□□ 2.36
PTX4-203ENST00000447419 ASXL1Q8IXJ9 1541 aa29.76■■■□□ 2.36
PTX4-203ENST00000447419 L3MBTL2Q969R5 705 aa29.71■■■□□ 2.35
PTX4-203ENST00000447419 WAPLQ7Z5K2 1190 aa29.7■■■□□ 2.34
PTX4-203ENST00000447419 C19orf44Q9H6X5 657 aa29.7■■■□□ 2.34
PTX4-203ENST00000447419 HSPA1LP34931 641 aa29.69■■■□□ 2.34
PTX4-203ENST00000447419 ATF3P18847 181 aa29.68■■■□□ 2.34
PTX4-203ENST00000447419 LRPPRCP42704 1394 aaKnown RBP29.68■■■□□ 2.34
PTX4-203ENST00000447419 YTHDC2Q9H6S0 1430 aaKnown RBP29.68■■■□□ 2.34
PTX4-203ENST00000447419 PTCH1Q13635 1447 aa29.67■■■□□ 2.34
PTX4-203ENST00000447419 NCOA3Q9Y6Q9 1424 aa29.67■■■□□ 2.34
PTX4-203ENST00000447419 SLAIN2Q9P270 581 aa29.66■■■□□ 2.34
PTX4-203ENST00000447419 PLEKHH1Q9ULM0 1364 aa29.65■■■□□ 2.34
PTX4-203ENST00000447419 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.64■■■□□ 2.34
PTX4-203ENST00000447419 SAFB2Q14151 953 aaKnown RBP eCLIP29.62■■■□□ 2.33
PTX4-203ENST00000447419 CADPS2Q86UW7 1296 aa29.62■■■□□ 2.33
PTX4-203ENST00000447419 ADGRL3Q9HAR2 1447 aa29.62■■■□□ 2.33
PTX4-203ENST00000447419 ABCC11Q96J66 1382 aa29.62■■■□□ 2.33
PTX4-203ENST00000447419 TRAK1Q9UPV9 953 aa29.61■■■□□ 2.33
PTX4-203ENST00000447419 STAC3Q96MF2 364 aa29.61■■■□□ 2.33
PTX4-203ENST00000447419 NALCNQ8IZF0 1738 aa29.6■■■□□ 2.33
PTX4-203ENST00000447419 LAMC1P11047 1609 aa29.6■■■□□ 2.33
PTX4-203ENST00000447419 ADGRB1O14514 1584 aa29.58■■■□□ 2.33
PTX4-203ENST00000447419 TECPR2O15040 1411 aa29.58■■■□□ 2.33
PTX4-203ENST00000447419 PRAG1Q86YV5 1406 aa29.58■■■□□ 2.33
PTX4-203ENST00000447419 NBPF1Q3BBV0 1214 aa29.57■■■□□ 2.32
PTX4-203ENST00000447419 PRAM1Q96QH2 718 aa29.57■■■□□ 2.32
PTX4-203ENST00000447419 ROBO1Q9Y6N7 1651 aa29.55■■■□□ 2.32
PTX4-203ENST00000447419 FAM135BQ49AJ0 1406 aa29.55■■■□□ 2.32
PTX4-203ENST00000447419 NUTM2FA1L443 756 aa29.54■■■□□ 2.32
PTX4-203ENST00000447419 POGKQ9P215 609 aa29.52■■■□□ 2.32
PTX4-203ENST00000447419 DCCP43146 1447 aa29.52■■■□□ 2.32
PTX4-203ENST00000447419 MST1RQ04912 1400 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms