RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 TRIM6-TRIM34B2RNG4 842 aa9.59□□□□□ -0.87
SMG1-202ENST00000446231 ERICH4A6NGS2 130 aa9.58□□□□□ -0.88
SMG1-202ENST00000446231 AK7Q96M32 723 aa9.58□□□□□ -0.88
SMG1-202ENST00000446231 GOLGA6L19H0YKK7 550 aa9.58□□□□□ -0.88
SMG1-202ENST00000446231 C20orf194Q5TEA3 1177 aa9.58□□□□□ -0.88
SMG1-202ENST00000446231 TNPO1Q92973 898 aaKnown RBP9.58□□□□□ -0.88
SMG1-202ENST00000446231 LNPKQ9C0E8 428 aa9.57□□□□□ -0.88
SMG1-202ENST00000446231 TIGD1Q96MW7 591 aa9.57□□□□□ -0.88
SMG1-202ENST00000446231 BECN2A8MW95 431 aa9.57□□□□□ -0.88
SMG1-202ENST00000446231 SMAP1Q8IYB5 467 aaPredicted RBP9.57□□□□□ -0.88
SMG1-202ENST00000446231 BCL11BQ9C0K0 894 aaPredicted RBP9.57□□□□□ -0.88
SMG1-202ENST00000446231 GNL2Q13823 731 aaKnown RBP9.57□□□□□ -0.88
SMG1-202ENST00000446231 TSPYL1Q9H0U9 437 aa9.57□□□□□ -0.88
SMG1-202ENST00000446231 HOMER1Q86YM7 354 aa9.57□□□□□ -0.88
SMG1-202ENST00000446231 DDX19BQ9UMR2 479 aa9.57□□□□□ -0.88
SMG1-202ENST00000446231 MNS1Q8NEH6 495 aa9.56□□□□□ -0.88
SMG1-202ENST00000446231 RUSC2Q8N2Y8 1516 aa9.56□□□□□ -0.88
SMG1-202ENST00000446231 HS1BP3Q53T59 392 aa9.56□□□□□ -0.88
SMG1-202ENST00000446231 CALCOCO1Q9P1Z2 691 aa9.56□□□□□ -0.88
SMG1-202ENST00000446231 HAP1P54257 671 aaPredicted RBP9.55□□□□□ -0.88
SMG1-202ENST00000446231 TRIM5Q9C035 493 aa9.55□□□□□ -0.88
SMG1-202ENST00000446231 FAM184AQ8NB25 1140 aa9.55□□□□□ -0.88
SMG1-202ENST00000446231 GPATCH3Q96I76 525 aa9.55□□□□□ -0.88
SMG1-202ENST00000446231 SENP3Q9H4L4 574 aaPredicted RBP9.55□□□□□ -0.88
SMG1-202ENST00000446231 WDR97A6NE52 1622 aa9.55□□□□□ -0.88
SMG1-202ENST00000446231 NBPF8Q3BBV2 869 aa9.55□□□□□ -0.88
SMG1-202ENST00000446231 K7ELQ4 463 aaPredicted RBP9.55□□□□□ -0.88
SMG1-202ENST00000446231 NPHP1O15259 732 aa9.55□□□□□ -0.88
SMG1-202ENST00000446231 TBC1D32Q96NH3 1257 aa9.55□□□□□ -0.88
SMG1-202ENST00000446231 CHMP3Q9Y3E7 222 aa9.55□□□□□ -0.88
SMG1-202ENST00000446231 NOC3LQ8WTT2 800 aaKnown RBP9.54□□□□□ -0.88
SMG1-202ENST00000446231 SPDYE4A6NLX3 237 aa9.54□□□□□ -0.88
SMG1-202ENST00000446231 INTS3Q68E01 1043 aaKnown RBP9.54□□□□□ -0.88
SMG1-202ENST00000446231 DEF6Q9H4E7 631 aa9.54□□□□□ -0.88
SMG1-202ENST00000446231 SYCE3A1L190 88 aa9.53□□□□□ -0.88
SMG1-202ENST00000446231 BCAR3O75815 825 aa9.53□□□□□ -0.88
SMG1-202ENST00000446231 SPC24Q8NBT2 197 aa9.53□□□□□ -0.88
SMG1-202ENST00000446231 TRERF1Q96PN7 1200 aa9.53□□□□□ -0.88
SMG1-202ENST00000446231 RRBP1Q9P2E9 1410 aaKnown RBP9.53□□□□□ -0.88
SMG1-202ENST00000446231 PPP2R1AP30153 589 aa9.53□□□□□ -0.88
SMG1-202ENST00000446231 TERF1P54274 439 aa9.53□□□□□ -0.88
SMG1-202ENST00000446231 FBXW7Q969H0 707 aa9.53□□□□□ -0.88
SMG1-202ENST00000446231 CCDC18Q5T9S5 1454 aa9.52□□□□□ -0.89
SMG1-202ENST00000446231 PRIMPOLQ96LW4 560 aa9.52□□□□□ -0.89
SMG1-202ENST00000446231 H3BQV1 296 aa9.52□□□□□ -0.89
SMG1-202ENST00000446231 IFFO2Q5TF58 517 aa9.52□□□□□ -0.89
SMG1-202ENST00000446231 ANKRD30AQ9BXX3 1397 aa9.52□□□□□ -0.89
SMG1-202ENST00000446231 HSP90B2PQ58FF3 399 aa9.52□□□□□ -0.89
SMG1-202ENST00000446231 GON4LQ3T8J9 2241 aa9.51□□□□□ -0.89
SMG1-202ENST00000446231 IRX3P78415 501 aaPredicted RBP9.51□□□□□ -0.89
SMG1-202ENST00000446231 NBPF1Q3BBV0 1214 aa9.51□□□□□ -0.89
SMG1-202ENST00000446231 SSFA2P28290 1259 aa9.51□□□□□ -0.89
SMG1-202ENST00000446231 TAOK2Q9UL54 1235 aa9.51□□□□□ -0.89
SMG1-202ENST00000446231 CCDC192P0DO97 292 aa9.51□□□□□ -0.89
SMG1-202ENST00000446231 RUNDC1Q96C34 613 aa9.51□□□□□ -0.89
SMG1-202ENST00000446231 UACAQ9BZF9 1416 aa9.5□□□□□ -0.89
SMG1-202ENST00000446231 SMC3Q9UQE7 1217 aa9.5□□□□□ -0.89
SMG1-202ENST00000446231 MROH2BQ7Z745 1585 aa9.5□□□□□ -0.89
SMG1-202ENST00000446231 CCP110O43303 1012 aa9.5□□□□□ -0.89
SMG1-202ENST00000446231 NAT10Q9H0A0 1025 aaKnown RBP9.5□□□□□ -0.89
SMG1-202ENST00000446231 MCM2P49736 904 aa9.5□□□□□ -0.89
SMG1-202ENST00000446231 SF3A1Q15459 793 aaKnown RBP9.5□□□□□ -0.89
SMG1-202ENST00000446231 TPM1P09493 284 aa9.5□□□□□ -0.89
SMG1-202ENST00000446231 PDIA4P13667 645 aaKnown RBP9.5□□□□□ -0.89
SMG1-202ENST00000446231 NOB1Q9ULX3 412 aaKnown RBP9.49□□□□□ -0.89
SMG1-202ENST00000446231 HSP90B1P14625 803 aaKnown RBP9.49□□□□□ -0.89
SMG1-202ENST00000446231 NEK4P51957 841 aa9.49□□□□□ -0.89
SMG1-202ENST00000446231 GORABQ5T7V8 394 aa9.49□□□□□ -0.89
SMG1-202ENST00000446231 RNF20Q5VTR2 975 aa9.49□□□□□ -0.89
SMG1-202ENST00000446231 CHMP4AQ9BY43 222 aa9.49□□□□□ -0.89
SMG1-202ENST00000446231 RILPL2Q969X0 211 aa9.49□□□□□ -0.89
SMG1-202ENST00000446231 SLFN5Q08AF3 891 aa9.49□□□□□ -0.89
SMG1-202ENST00000446231 CHMP7Q8WUX9 453 aaPredicted RBP9.49□□□□□ -0.89
SMG1-202ENST00000446231 KRT222Q8N1A0 295 aa9.49□□□□□ -0.89
SMG1-202ENST00000446231 ACBD3Q9H3P7 528 aa9.49□□□□□ -0.89
SMG1-202ENST00000446231 API5Q9BZZ5 524 aaKnown RBP9.48□□□□□ -0.89
SMG1-202ENST00000446231 ZSCAN23Q3MJ62 389 aa9.48□□□□□ -0.89
SMG1-202ENST00000446231 C8orf34Q49A92 452 aa9.48□□□□□ -0.89
SMG1-202ENST00000446231 LEKR1Q6ZMV7 388 aa9.48□□□□□ -0.89
SMG1-202ENST00000446231 BAG4O95429 457 aaKnown RBP9.48□□□□□ -0.89
SMG1-202ENST00000446231 WDR63Q8IWG1 891 aa9.48□□□□□ -0.89
SMG1-202ENST00000446231 MIA2Q96PC5 1412 aa9.48□□□□□ -0.89
SMG1-202ENST00000446231 LMOD3Q0VAK6 560 aa9.47□□□□□ -0.89
SMG1-202ENST00000446231 CCDC34Q96HJ3 373 aa9.47□□□□□ -0.89
SMG1-202ENST00000446231 KIF20AO95235 890 aa9.47□□□□□ -0.89
SMG1-202ENST00000446231 PLCD3Q8N3E9 789 aa9.47□□□□□ -0.89
SMG1-202ENST00000446231 POLR3GO15318 223 aaPredicted RBP9.47□□□□□ -0.89
SMG1-202ENST00000446231 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.47□□□□□ -0.89
SMG1-202ENST00000446231 KIF21BO75037 1637 aa9.47□□□□□ -0.89
SMG1-202ENST00000446231 SMC2O95347 1197 aa9.47□□□□□ -0.89
SMG1-202ENST00000446231 CUX2O14529 1486 aa9.47□□□□□ -0.89
SMG1-202ENST00000446231 CCDC183Q5T5S1 534 aa9.47□□□□□ -0.89
SMG1-202ENST00000446231 CCDC70Q6NSX1 233 aa9.47□□□□□ -0.89
SMG1-202ENST00000446231 ANO2Q9NQ90 1003 aa9.47□□□□□ -0.89
SMG1-202ENST00000446231 DNAJC2Q99543 621 aaKnown RBP9.47□□□□□ -0.89
SMG1-202ENST00000446231 FIBPO43427 364 aa9.46□□□□□ -0.89
SMG1-202ENST00000446231 GTF2F1P35269 517 aaKnown RBP eCLIP9.46□□□□□ -0.89
SMG1-202ENST00000446231 NOL7Q9UMY1 257 aaKnown RBP9.46□□□□□ -0.89
SMG1-202ENST00000446231 RTF1Q92541 710 aaKnown RBP9.46□□□□□ -0.89
SMG1-202ENST00000446231 WDR33Q9C0J8 1336 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms