RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.55□□□□□ -0.56
BRAFP1-201ENST00000445336 TROQ12816 1431 aaPredicted RBP11.55□□□□□ -0.56
BRAFP1-201ENST00000445336 ASXL1Q8IXJ9 1541 aa11.55□□□□□ -0.56
BRAFP1-201ENST00000445336 HSPA6P17066 643 aa11.54□□□□□ -0.56
BRAFP1-201ENST00000445336 PROSER2Q86WR7 435 aaPredicted RBP11.54□□□□□ -0.56
BRAFP1-201ENST00000445336 RPRD2Q5VT52 1461 aaKnown RBP11.54□□□□□ -0.56
BRAFP1-201ENST00000445336 PRXQ9BXM0 1461 aa11.54□□□□□ -0.56
BRAFP1-201ENST00000445336 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
BRAFP1-201ENST00000445336 MAST1Q9Y2H9 1570 aa11.53□□□□□ -0.56
BRAFP1-201ENST00000445336 CAMTA1Q9Y6Y1 1673 aa11.53□□□□□ -0.56
BRAFP1-201ENST00000445336 TNS1Q9HBL0 1735 aaKnown RBP11.53□□□□□ -0.56
BRAFP1-201ENST00000445336 USP21Q9UK80 565 aa11.52□□□□□ -0.57
BRAFP1-201ENST00000445336 ERVK-7P63135 1459 aa11.52□□□□□ -0.57
BRAFP1-201ENST00000445336 CDK11AQ9UQ88 783 aaPredicted RBP11.51□□□□□ -0.57
BRAFP1-201ENST00000445336 SHANK3Q9BYB0 1731 aa11.51□□□□□ -0.57
BRAFP1-201ENST00000445336 PTPN23Q9H3S7 1636 aa11.51□□□□□ -0.57
BRAFP1-201ENST00000445336 C8orf37Q96NL8 207 aa11.5□□□□□ -0.57
BRAFP1-201ENST00000445336 EID1Q9Y6B2 187 aa11.5□□□□□ -0.57
BRAFP1-201ENST00000445336 GLI3P10071 1580 aa11.5□□□□□ -0.57
BRAFP1-201ENST00000445336 DEFB132Q7Z7B7 95 aa11.49□□□□□ -0.57
BRAFP1-201ENST00000445336 SPAG9O60271 1321 aaKnown RBP11.49□□□□□ -0.57
BRAFP1-201ENST00000445336 DLC1Q96QB1 1528 aa11.49□□□□□ -0.57
BRAFP1-201ENST00000445336 PSDA5PKW4 1024 aaPredicted RBP11.48□□□□□ -0.57
BRAFP1-201ENST00000445336 ADGRB3O60242 1522 aa11.48□□□□□ -0.57
BRAFP1-201ENST00000445336 SPON1Q9HCB6 807 aa11.48□□□□□ -0.57
BRAFP1-201ENST00000445336 MAP3K5Q99683 1374 aa11.48□□□□□ -0.57
BRAFP1-201ENST00000445336 CDC42BPAQ5VT25 1732 aa11.47□□□□□ -0.57
BRAFP1-201ENST00000445336 ARID3CA6NKF2 412 aa11.46□□□□□ -0.57
BRAFP1-201ENST00000445336 TNS4Q8IZW8 715 aa11.46□□□□□ -0.57
BRAFP1-201ENST00000445336 DHX29Q7Z478 1369 aaKnown RBP11.46□□□□□ -0.57
BRAFP1-201ENST00000445336 PIK3R4Q99570 1358 aa11.46□□□□□ -0.57
BRAFP1-201ENST00000445336 NUP188Q5SRE5 1749 aa11.46□□□□□ -0.57
BRAFP1-201ENST00000445336 RGPD3A6NKT7 1758 aaPredicted RBP11.46□□□□□ -0.57
BRAFP1-201ENST00000445336 RGPD4Q7Z3J3 1758 aa11.46□□□□□ -0.57
BRAFP1-201ENST00000445336 GJD4Q96KN9 370 aaPredicted RBP11.46□□□□□ -0.58
BRAFP1-201ENST00000445336 ONECUT3O60422 494 aaPredicted RBP11.45□□□□□ -0.58
BRAFP1-201ENST00000445336 KCNQ2O43526 872 aa11.44□□□□□ -0.58
BRAFP1-201ENST00000445336 CASZ1Q86V15 1759 aa11.44□□□□□ -0.58
BRAFP1-201ENST00000445336 TMEM2Q9UHN6 1383 aa11.44□□□□□ -0.58
BRAFP1-201ENST00000445336 NWD2Q9ULI1 1742 aa11.43□□□□□ -0.58
BRAFP1-201ENST00000445336 PPP1R15AO75807 674 aaPredicted RBP11.43□□□□□ -0.58
BRAFP1-201ENST00000445336 TXNDC2Q86VQ3 553 aa11.43□□□□□ -0.58
BRAFP1-201ENST00000445336 APLP1P51693 650 aa11.42□□□□□ -0.58
BRAFP1-201ENST00000445336 PPP1R1BQ9UD71 204 aaPredicted RBP11.42□□□□□ -0.58
BRAFP1-201ENST00000445336 ARHGAP31Q2M1Z3 1444 aa11.42□□□□□ -0.58
BRAFP1-201ENST00000445336 FAM83GA6ND36 823 aa11.42□□□□□ -0.58
BRAFP1-201ENST00000445336 R3HDM1Q15032 1099 aaKnown RBP11.42□□□□□ -0.58
BRAFP1-201ENST00000445336 FMN1Q68DA7 1419 aa11.42□□□□□ -0.58
BRAFP1-201ENST00000445336 EIF2AK4Q9P2K8 1649 aaKnown RBP11.41□□□□□ -0.58
BRAFP1-201ENST00000445336 C19orf44Q9H6X5 657 aa11.41□□□□□ -0.58
BRAFP1-201ENST00000445336 MYOM2P54296 1465 aa11.41□□□□□ -0.58
BRAFP1-201ENST00000445336 FBXO31Q5XUX0 539 aaPredicted RBP11.41□□□□□ -0.58
BRAFP1-201ENST00000445336 BRINP3Q76B58 766 aa11.41□□□□□ -0.58
BRAFP1-201ENST00000445336 JMYQ8N9B5 988 aa11.41□□□□□ -0.58
BRAFP1-201ENST00000445336 TMEM131LA2VDJ0 1609 aa11.4□□□□□ -0.59
BRAFP1-201ENST00000445336 KIAA1210Q9ULL0 1709 aa11.4□□□□□ -0.59
BRAFP1-201ENST00000445336 LTKP29376 864 aa11.39□□□□□ -0.59
BRAFP1-201ENST00000445336 GGT6Q6P531 493 aa11.39□□□□□ -0.59
BRAFP1-201ENST00000445336 FYCO1Q9BQS8 1478 aa11.39□□□□□ -0.59
BRAFP1-201ENST00000445336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.39□□□□□ -0.59
BRAFP1-201ENST00000445336 ABCC5O15440 1437 aa11.39□□□□□ -0.59
BRAFP1-201ENST00000445336 SLIT2O94813 1529 aa11.38□□□□□ -0.59
BRAFP1-201ENST00000445336 NRKQ7Z2Y5 1582 aa11.37□□□□□ -0.59
BRAFP1-201ENST00000445336 EFCAB6Q5THR3 1501 aa11.37□□□□□ -0.59
BRAFP1-201ENST00000445336 ATF3P18847 181 aa11.37□□□□□ -0.59
BRAFP1-201ENST00000445336 MST1RQ04912 1400 aa11.35□□□□□ -0.59
BRAFP1-201ENST00000445336 PIK3C2BO00750 1634 aa11.35□□□□□ -0.59
BRAFP1-201ENST00000445336 NBPF8Q3BBV2 869 aa11.35□□□□□ -0.59
BRAFP1-201ENST00000445336 NBPF14Q5TI25 921 aa11.35□□□□□ -0.59
BRAFP1-201ENST00000445336 EHBP1L1Q8N3D4 1523 aa11.33□□□□□ -0.6
BRAFP1-201ENST00000445336 MYOM1P52179 1685 aa11.33□□□□□ -0.6
BRAFP1-201ENST00000445336 COL13A1Q5TAT6 717 aaPredicted RBP11.33□□□□□ -0.6
BRAFP1-201ENST00000445336 KRT27Q7Z3Y8 459 aa11.33□□□□□ -0.6
BRAFP1-201ENST00000445336 USP32Q8NFA0 1604 aa11.33□□□□□ -0.6
BRAFP1-201ENST00000445336 PLEKHG1Q9ULL1 1385 aa11.32□□□□□ -0.6
BRAFP1-201ENST00000445336 DNAJC5GQ8N7S2 189 aa11.32□□□□□ -0.6
BRAFP1-201ENST00000445336 WDR90Q96KV7 1748 aa11.32□□□□□ -0.6
BRAFP1-201ENST00000445336 TNS2Q63HR2 1409 aa11.31□□□□□ -0.6
BRAFP1-201ENST00000445336 WASHC2CQ9Y4E1 1318 aa11.31□□□□□ -0.6
BRAFP1-201ENST00000445336 CAMKK2Q96RR4 588 aa11.31□□□□□ -0.6
BRAFP1-201ENST00000445336 SOS2Q07890 1332 aaPredicted RBP11.3□□□□□ -0.6
BRAFP1-201ENST00000445336 CAPN15O75808 1086 aa11.29□□□□□ -0.6
BRAFP1-201ENST00000445336 UNC5CLQ8IV45 518 aa11.29□□□□□ -0.6
BRAFP1-201ENST00000445336 TBX22Q9Y458 520 aa11.28□□□□□ -0.6
BRAFP1-201ENST00000445336 CCDC18Q5T9S5 1454 aa11.28□□□□□ -0.6
BRAFP1-201ENST00000445336 VPS72Q15906 364 aa11.28□□□□□ -0.6
BRAFP1-201ENST00000445336 SEPT12Q8IYM1 358 aa11.27□□□□□ -0.61
BRAFP1-201ENST00000445336 WWC3Q9ULE0 1092 aa11.27□□□□□ -0.61
BRAFP1-201ENST00000445336 THSD7AQ9UPZ6 1657 aa11.27□□□□□ -0.61
BRAFP1-201ENST00000445336 CEP152O94986 1710 aa11.26□□□□□ -0.61
BRAFP1-201ENST00000445336 TRPM2O94759 1503 aa11.26□□□□□ -0.61
BRAFP1-201ENST00000445336 COL24A1Q17RW2 1714 aa11.25□□□□□ -0.61
BRAFP1-201ENST00000445336 XRN1Q8IZH2 1706 aaKnown RBP11.25□□□□□ -0.61
BRAFP1-201ENST00000445336 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
BRAFP1-201ENST00000445336 P3H3Q8IVL6 736 aa11.24□□□□□ -0.61
BRAFP1-201ENST00000445336 RGS19P49795 217 aa11.23□□□□□ -0.61
BRAFP1-201ENST00000445336 C11orf95C9JLR9 678 aaPredicted RBP11.23□□□□□ -0.61
BRAFP1-201ENST00000445336 HNRNPMP52272 730 aaKnown RBP eCLIP11.23□□□□□ -0.61
BRAFP1-201ENST00000445336 ADCY9O60503 1353 aa11.22□□□□□ -0.61
BRAFP1-201ENST00000445336 PLCH1Q4KWH8 1693 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 218.1 ms