RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 CPS1P31327 1500 aa20.18■□□□□ 0.82
GARNL3-208ENST00000444677 RAB3GAP2Q9H2M9 1393 aa20.18■□□□□ 0.82
GARNL3-208ENST00000444677 ZFYVE9O95405 1425 aa20.18■□□□□ 0.82
GARNL3-208ENST00000444677 PPP1R15AO75807 674 aaPredicted RBP20.16■□□□□ 0.82
GARNL3-208ENST00000444677 BCANQ96GW7 911 aa20.16■□□□□ 0.82
GARNL3-208ENST00000444677 TMEM131LA2VDJ0 1609 aa20.15■□□□□ 0.82
GARNL3-208ENST00000444677 ZNF326Q5BKZ1 582 aaKnown RBP20.14■□□□□ 0.81
GARNL3-208ENST00000444677 HDGFP51858 240 aaKnown RBP20.13■□□□□ 0.81
GARNL3-208ENST00000444677 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.13■□□□□ 0.81
GARNL3-208ENST00000444677 PLEKHG1Q9ULL1 1385 aa20.1■□□□□ 0.81
GARNL3-208ENST00000444677 UBAP1LF5GYI3 381 aa20.1■□□□□ 0.81
GARNL3-208ENST00000444677 TRPM2O94759 1503 aa20.1■□□□□ 0.81
GARNL3-208ENST00000444677 CLTCL1P53675 1640 aa20.09■□□□□ 0.81
GARNL3-208ENST00000444677 SPHKAPQ2M3C7 1700 aa20.07■□□□□ 0.8
GARNL3-208ENST00000444677 XIRP1Q702N8 1843 aaKnown RBP20.06■□□□□ 0.8
GARNL3-208ENST00000444677 KCNA6P17658 529 aa20.06■□□□□ 0.8
GARNL3-208ENST00000444677 RBM33Q96EV2 1170 aaKnown RBP20.05■□□□□ 0.8
GARNL3-208ENST00000444677 TBX22Q9Y458 520 aa20.05■□□□□ 0.8
GARNL3-208ENST00000444677 ADAMTS13Q76LX8 1427 aa20.04■□□□□ 0.8
GARNL3-208ENST00000444677 LRRC7Q96NW7 1537 aa20.04■□□□□ 0.8
GARNL3-208ENST00000444677 ACIN1Q9UKV3 1341 aaKnown RBP20.03■□□□□ 0.8
GARNL3-208ENST00000444677 HRCP23327 699 aa20.03■□□□□ 0.8
GARNL3-208ENST00000444677 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.8
GARNL3-208ENST00000444677 ALKQ9UM73 1620 aa20.02■□□□□ 0.8
GARNL3-208ENST00000444677 RGL3Q3MIN7 710 aa20.02■□□□□ 0.8
GARNL3-208ENST00000444677 PROSER2Q86WR7 435 aaPredicted RBP20■□□□□ 0.79
GARNL3-208ENST00000444677 CCDC144AA2RUR9 1427 aa20■□□□□ 0.79
GARNL3-208ENST00000444677 PIP4K2BP78356 416 aa19.98■□□□□ 0.79
GARNL3-208ENST00000444677 NEXMIFQ5QGS0 1516 aa19.97■□□□□ 0.79
GARNL3-208ENST00000444677 TMEM94Q12767 1356 aa19.97■□□□□ 0.79
GARNL3-208ENST00000444677 RPGRIP1LQ68CZ1 1315 aa19.97■□□□□ 0.79
GARNL3-208ENST00000444677 DISP3Q9P2K9 1392 aa19.95■□□□□ 0.79
GARNL3-208ENST00000444677 SPATA31E1Q6ZUB1 1445 aa19.95■□□□□ 0.78
GARNL3-208ENST00000444677 PTPRUQ92729 1446 aa19.95■□□□□ 0.78
GARNL3-208ENST00000444677 VGFO15240 615 aaPredicted RBP19.95■□□□□ 0.78
GARNL3-208ENST00000444677 TOM1O60784 492 aa19.95■□□□□ 0.78
GARNL3-208ENST00000444677 AMOTL2Q9Y2J4 779 aa19.95■□□□□ 0.78
GARNL3-208ENST00000444677 NWD1Q149M9 1564 aa19.95■□□□□ 0.78
GARNL3-208ENST00000444677 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.78
GARNL3-208ENST00000444677 METP08581 1390 aa19.94■□□□□ 0.78
GARNL3-208ENST00000444677 ADGRF5Q8IZF2 1346 aa19.93■□□□□ 0.78
GARNL3-208ENST00000444677 CHD2O14647 1828 aaKnown RBP19.92■□□□□ 0.78
GARNL3-208ENST00000444677 PIK3R4Q99570 1358 aa19.9■□□□□ 0.78
GARNL3-208ENST00000444677 NRXN3Q9Y4C0 1643 aa19.9■□□□□ 0.78
GARNL3-208ENST00000444677 SETBP1Q9Y6X0 1596 aa19.89■□□□□ 0.77
GARNL3-208ENST00000444677 HSPA1LP34931 641 aa19.88■□□□□ 0.77
GARNL3-208ENST00000444677 KIF1BO60333 1816 aa19.88■□□□□ 0.77
GARNL3-208ENST00000444677 NKTRP30414 1462 aaKnown RBP19.87■□□□□ 0.77
GARNL3-208ENST00000444677 DIP2AQ14689 1571 aa19.87■□□□□ 0.77
GARNL3-208ENST00000444677 TRIM26Q12899 539 aaPredicted RBP19.85■□□□□ 0.77
GARNL3-208ENST00000444677 MED1Q15648 1581 aaPredicted RBP19.85■□□□□ 0.77
GARNL3-208ENST00000444677 C14orf37Q86TY3 774 aa19.83■□□□□ 0.77
GARNL3-208ENST00000444677 ROBO1Q9Y6N7 1651 aa19.81■□□□□ 0.76
GARNL3-208ENST00000444677 TMEM132EQ6IEE7 984 aa19.81■□□□□ 0.76
GARNL3-208ENST00000444677 MSH6P52701 1360 aa19.81■□□□□ 0.76
GARNL3-208ENST00000444677 KDM2AQ9Y2K7 1162 aa19.8■□□□□ 0.76
GARNL3-208ENST00000444677 CFAP70Q5T0N1 1121 aa19.78■□□□□ 0.76
GARNL3-208ENST00000444677 DCAF11Q8TEB1 546 aa19.78■□□□□ 0.76
GARNL3-208ENST00000444677 C19orf44Q9H6X5 657 aa19.78■□□□□ 0.76
GARNL3-208ENST00000444677 PPLO60437 1756 aa19.78■□□□□ 0.76
GARNL3-208ENST00000444677 NCOA3Q9Y6Q9 1424 aa19.77■□□□□ 0.76
GARNL3-208ENST00000444677 ILDR2Q71H61 639 aa19.77■□□□□ 0.76
GARNL3-208ENST00000444677 SLAIN2Q9P270 581 aa19.77■□□□□ 0.76
GARNL3-208ENST00000444677 STK26Q9P289 416 aa19.77■□□□□ 0.76
GARNL3-208ENST00000444677 DHX57Q6P158 1386 aaKnown RBP19.77■□□□□ 0.76
GARNL3-208ENST00000444677 ROBO2Q9HCK4 1378 aa19.77■□□□□ 0.76
GARNL3-208ENST00000444677 C14orf93Q9H972 538 aaKnown RBP19.76■□□□□ 0.75
GARNL3-208ENST00000444677 PIK3C2GO75747 1445 aa19.76■□□□□ 0.75
GARNL3-208ENST00000444677 XRN1Q8IZH2 1706 aaKnown RBP19.75■□□□□ 0.75
GARNL3-208ENST00000444677 SIN3AQ96ST3 1273 aa19.74■□□□□ 0.75
GARNL3-208ENST00000444677 ATF3P18847 181 aa19.73■□□□□ 0.75
GARNL3-208ENST00000444677 FAM135BQ49AJ0 1406 aa19.73■□□□□ 0.75
GARNL3-208ENST00000444677 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.73■□□□□ 0.75
GARNL3-208ENST00000444677 NRXN1Q9ULB1 1477 aa19.73■□□□□ 0.75
GARNL3-208ENST00000444677 WAPLQ7Z5K2 1190 aa19.72■□□□□ 0.75
GARNL3-208ENST00000444677 PHLPP1O60346 1717 aa19.71■□□□□ 0.75
GARNL3-208ENST00000444677 CADPS2Q86UW7 1296 aa19.71■□□□□ 0.75
GARNL3-208ENST00000444677 MYOM2P54296 1465 aa19.71■□□□□ 0.75
GARNL3-208ENST00000444677 ASXL1Q8IXJ9 1541 aa19.71■□□□□ 0.75
GARNL3-208ENST00000444677 SETD1AO15047 1707 aaKnown RBP19.71■□□□□ 0.75
GARNL3-208ENST00000444677 LRPPRCP42704 1394 aaKnown RBP19.7■□□□□ 0.74
GARNL3-208ENST00000444677 PTCH1Q13635 1447 aa19.69■□□□□ 0.74
GARNL3-208ENST00000444677 IFT172Q9UG01 1749 aa19.69■□□□□ 0.74
GARNL3-208ENST00000444677 PLEKHH1Q9ULM0 1364 aa19.69■□□□□ 0.74
GARNL3-208ENST00000444677 NEUROD1Q13562 356 aa19.68■□□□□ 0.74
GARNL3-208ENST00000444677 ABCC11Q96J66 1382 aa19.68■□□□□ 0.74
GARNL3-208ENST00000444677 ADGRL3Q9HAR2 1447 aa19.68■□□□□ 0.74
GARNL3-208ENST00000444677 YTHDC2Q9H6S0 1430 aaKnown RBP19.67■□□□□ 0.74
GARNL3-208ENST00000444677 PRAG1Q86YV5 1406 aa19.66■□□□□ 0.74
GARNL3-208ENST00000444677 NALCNQ8IZF0 1738 aa19.65■□□□□ 0.74
GARNL3-208ENST00000444677 BRINP3Q76B58 766 aa19.65■□□□□ 0.74
GARNL3-208ENST00000444677 L3MBTL2Q969R5 705 aa19.64■□□□□ 0.73
GARNL3-208ENST00000444677 TECPR2O15040 1411 aa19.63■□□□□ 0.73
GARNL3-208ENST00000444677 MST1RQ04912 1400 aa19.63■□□□□ 0.73
GARNL3-208ENST00000444677 STAC3Q96MF2 364 aa19.63■□□□□ 0.73
GARNL3-208ENST00000444677 DCCP43146 1447 aa19.62■□□□□ 0.73
GARNL3-208ENST00000444677 COL16A1Q07092 1604 aaPredicted RBP19.62■□□□□ 0.73
GARNL3-208ENST00000444677 SAFB2Q14151 953 aaKnown RBP eCLIP19.61■□□□□ 0.73
GARNL3-208ENST00000444677 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
GARNL3-208ENST00000444677 TRAK1Q9UPV9 953 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms