RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 ILDR2Q71H61 639 aa35.97■■■■□ 3.35
TMEM238-201ENST00000444469 RIMS2Q9UQ26 1411 aa35.96■■■■□ 3.35
TMEM238-201ENST00000444469 ALKQ9UM73 1620 aa35.95■■■■□ 3.35
TMEM238-201ENST00000444469 SENP3Q9H4L4 574 aaPredicted RBP35.95■■■■□ 3.35
TMEM238-201ENST00000444469 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.94■■■■□ 3.34
TMEM238-201ENST00000444469 PROSER2Q86WR7 435 aaPredicted RBP35.92■■■■□ 3.34
TMEM238-201ENST00000444469 TMEM131LA2VDJ0 1609 aa35.92■■■■□ 3.34
TMEM238-201ENST00000444469 PLEKHG1Q9ULL1 1385 aa35.91■■■■□ 3.34
TMEM238-201ENST00000444469 ZFYVE9O95405 1425 aa35.91■■■■□ 3.34
TMEM238-201ENST00000444469 MYO5BQ9ULV0 1848 aa35.9■■■■□ 3.34
TMEM238-201ENST00000444469 TMEM94Q12767 1356 aa35.89■■■■□ 3.34
TMEM238-201ENST00000444469 RRBP1Q9P2E9 1410 aaKnown RBP35.87■■■■□ 3.33
TMEM238-201ENST00000444469 NKTRP30414 1462 aaKnown RBP35.86■■■■□ 3.33
TMEM238-201ENST00000444469 XIRP1Q702N8 1843 aaKnown RBP35.84■■■■□ 3.33
TMEM238-201ENST00000444469 MED1Q15648 1581 aaPredicted RBP35.82■■■■□ 3.32
TMEM238-201ENST00000444469 SOCS7O14512 581 aa35.82■■■■□ 3.32
TMEM238-201ENST00000444469 NWD1Q149M9 1564 aa35.81■■■■□ 3.32
TMEM238-201ENST00000444469 NUTM2DQ5VT03 806 aaPredicted RBP35.79■■■■□ 3.32
TMEM238-201ENST00000444469 RBM33Q96EV2 1170 aaKnown RBP35.78■■■■□ 3.32
TMEM238-201ENST00000444469 MSH6P52701 1360 aa35.77■■■■□ 3.32
TMEM238-201ENST00000444469 PHF23Q9BUL5 403 aaPredicted RBP35.77■■■■□ 3.32
TMEM238-201ENST00000444469 TBX22Q9Y458 520 aa35.77■■■■□ 3.32
TMEM238-201ENST00000444469 SPHKAPQ2M3C7 1700 aa35.73■■■■□ 3.31
TMEM238-201ENST00000444469 ZNF326Q5BKZ1 582 aaKnown RBP35.72■■■■□ 3.31
TMEM238-201ENST00000444469 DIP2AQ14689 1571 aa35.72■■■■□ 3.31
TMEM238-201ENST00000444469 NAIPQ13075 1403 aa35.71■■■■□ 3.31
TMEM238-201ENST00000444469 FAM135BQ49AJ0 1406 aa35.71■■■■□ 3.31
TMEM238-201ENST00000444469 CHD2O14647 1828 aaKnown RBP35.69■■■■□ 3.3
TMEM238-201ENST00000444469 C14orf37Q86TY3 774 aa35.69■■■■□ 3.3
TMEM238-201ENST00000444469 TRIM52Q96A61 297 aa35.68■■■■□ 3.3
TMEM238-201ENST00000444469 PIK3R4Q99570 1358 aa35.65■■■■□ 3.3
TMEM238-201ENST00000444469 ADAMTS13Q76LX8 1427 aa35.65■■■■□ 3.3
TMEM238-201ENST00000444469 TRPM2O94759 1503 aa35.63■■■■□ 3.29
TMEM238-201ENST00000444469 HFM1A2PYH4 1435 aa35.61■■■■□ 3.29
TMEM238-201ENST00000444469 ROBO1Q9Y6N7 1651 aa35.6■■■■□ 3.29
TMEM238-201ENST00000444469 NCOA3Q9Y6Q9 1424 aa35.59■■■■□ 3.29
TMEM238-201ENST00000444469 SLAIN2Q9P270 581 aa35.59■■■■□ 3.29
TMEM238-201ENST00000444469 AMOTL2Q9Y2J4 779 aa35.55■■■■□ 3.28
TMEM238-201ENST00000444469 SLC4A1APQ9BWU0 796 aaKnown RBP35.54■■■■□ 3.28
TMEM238-201ENST00000444469 CLTCL1P53675 1640 aa35.54■■■■□ 3.28
TMEM238-201ENST00000444469 ATF3P18847 181 aa35.52■■■■□ 3.28
TMEM238-201ENST00000444469 CADPS2Q86UW7 1296 aa35.51■■■■□ 3.28
TMEM238-201ENST00000444469 SETBP1Q9Y6X0 1596 aa35.5■■■■□ 3.27
TMEM238-201ENST00000444469 C19orf44Q9H6X5 657 aa35.49■■■■□ 3.27
TMEM238-201ENST00000444469 KIF1BO60333 1816 aa35.48■■■■□ 3.27
TMEM238-201ENST00000444469 NEXMIFQ5QGS0 1516 aa35.43■■■■□ 3.26
TMEM238-201ENST00000444469 PTPRUQ92729 1446 aa35.43■■■■□ 3.26
TMEM238-201ENST00000444469 NRXN3Q9Y4C0 1643 aa35.43■■■■□ 3.26
TMEM238-201ENST00000444469 PHLPP1O60346 1717 aa35.42■■■■□ 3.26
TMEM238-201ENST00000444469 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.4■■■■□ 3.26
TMEM238-201ENST00000444469 VGFO15240 615 aaPredicted RBP35.39■■■■□ 3.26
TMEM238-201ENST00000444469 METP08581 1390 aa35.37■■■■□ 3.25
TMEM238-201ENST00000444469 XRN1Q8IZH2 1706 aaKnown RBP35.36■■■■□ 3.25
TMEM238-201ENST00000444469 JCADQ9P266 1359 aa35.36■■■■□ 3.25
TMEM238-201ENST00000444469 RPGRIP1LQ68CZ1 1315 aa35.34■■■■□ 3.25
TMEM238-201ENST00000444469 DCCP43146 1447 aa35.33■■■■□ 3.25
TMEM238-201ENST00000444469 FOXD1Q16676 465 aa35.27■■■■□ 3.24
TMEM238-201ENST00000444469 CCDC144AA2RUR9 1427 aa35.26■■■■□ 3.24
TMEM238-201ENST00000444469 ACIN1Q9UKV3 1341 aaKnown RBP35.26■■■■□ 3.23
TMEM238-201ENST00000444469 COL16A1Q07092 1604 aaPredicted RBP35.25■■■■□ 3.23
TMEM238-201ENST00000444469 RGS17Q9UGC6 210 aaPredicted RBP35.23■■■■□ 3.23
TMEM238-201ENST00000444469 AHDC1Q5TGY3 1603 aaPredicted RBP35.23■■■■□ 3.23
TMEM238-201ENST00000444469 BRINP3Q76B58 766 aa35.22■■■■□ 3.23
TMEM238-201ENST00000444469 MPHOSPH9Q99550 1183 aa35.22■■■■□ 3.23
TMEM238-201ENST00000444469 ADGRL3Q9HAR2 1447 aa35.22■■■■□ 3.23
TMEM238-201ENST00000444469 MEX3CQ5U5Q3 659 aaKnown RBP35.19■■■■□ 3.22
TMEM238-201ENST00000444469 SPATA31A6Q5VVP1 1343 aa35.19■■■■□ 3.22
TMEM238-201ENST00000444469 MST1RQ04912 1400 aa35.17■■■■□ 3.22
TMEM238-201ENST00000444469 PPLO60437 1756 aa35.17■■■■□ 3.22
TMEM238-201ENST00000444469 ASXL1Q8IXJ9 1541 aa35.16■■■■□ 3.22
TMEM238-201ENST00000444469 PTCH1Q13635 1447 aa35.15■■■■□ 3.22
TMEM238-201ENST00000444469 RGL3Q3MIN7 710 aa35.15■■■■□ 3.22
TMEM238-201ENST00000444469 SETD5Q9C0A6 1442 aa35.12■■■■□ 3.21
TMEM238-201ENST00000444469 NALCNQ8IZF0 1738 aa35.12■■■■□ 3.21
TMEM238-201ENST00000444469 SETD1AO15047 1707 aaKnown RBP35.1■■■■□ 3.21
TMEM238-201ENST00000444469 SHPRHQ149N8 1683 aa35.09■■■■□ 3.21
TMEM238-201ENST00000444469 POTEAQ6S8J7 498 aa35.09■■■■□ 3.21
TMEM238-201ENST00000444469 ANKRD30BQ9BXX2 1392 aa35.09■■■■□ 3.21
TMEM238-201ENST00000444469 ROBO2Q9HCK4 1378 aa35.08■■■■□ 3.21
TMEM238-201ENST00000444469 ADGRF5Q8IZF2 1346 aa35.05■■■■□ 3.2
TMEM238-201ENST00000444469 LRRC59Q96AG4 307 aaKnown RBP35.04■■■■□ 3.2
TMEM238-201ENST00000444469 SPATA31E1Q6ZUB1 1445 aa35.04■■■■□ 3.2
TMEM238-201ENST00000444469 NUTM2BA6NNL0 878 aaPredicted RBP35.03■■■■□ 3.2
TMEM238-201ENST00000444469 NUTM2EB1AL46 878 aaPredicted RBP35.03■■■■□ 3.2
TMEM238-201ENST00000444469 NUTM2AQ8IVF1 878 aaPredicted RBP35.03■■■■□ 3.2
TMEM238-201ENST00000444469 PRAG1Q86YV5 1406 aa35.03■■■■□ 3.2
TMEM238-201ENST00000444469 LRP6O75581 1613 aa35.03■■■■□ 3.2
TMEM238-201ENST00000444469 NHSL1Q5SYE7 1610 aa35.03■■■■□ 3.2
TMEM238-201ENST00000444469 C1orf167Q5SNV9 1468 aa35.01■■■■□ 3.19
TMEM238-201ENST00000444469 ZNF772Q68DY9 489 aaPredicted RBP35■■■■□ 3.19
TMEM238-201ENST00000444469 STK26Q9P289 416 aa34.98■■■■□ 3.19
TMEM238-201ENST00000444469 RAB3GAP2Q9H2M9 1393 aa34.96■■■■□ 3.19
TMEM238-201ENST00000444469 DDX17Q92841 729 aaKnown RBP34.95■■■■□ 3.19
TMEM238-201ENST00000444469 IFT172Q9UG01 1749 aa34.95■■■■□ 3.18
TMEM238-201ENST00000444469 ORAI2Q96SN7 254 aa34.91■■■■□ 3.18
TMEM238-201ENST00000444469 LRPPRCP42704 1394 aaKnown RBP34.9■■■■□ 3.18
TMEM238-201ENST00000444469 PIK3C2GO75747 1445 aa34.89■■■■□ 3.18
TMEM238-201ENST00000444469 TMEM132EQ6IEE7 984 aa34.88■■■■□ 3.17
TMEM238-201ENST00000444469 CDC42BPGQ6DT37 1551 aa34.87■■■■□ 3.17
TMEM238-201ENST00000444469 PNPLA6Q8IY17 1366 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms