RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 MYO5BQ9ULV0 1848 aa30.57■■■□□ 2.48
EDEM1-203ENST00000443790 TMEM131LA2VDJ0 1609 aa30.57■■■□□ 2.48
EDEM1-203ENST00000443790 NKTRP30414 1462 aaKnown RBP30.56■■■□□ 2.48
EDEM1-203ENST00000443790 E9PCH4 1651 aa30.55■■■□□ 2.48
EDEM1-203ENST00000443790 IQGAP3Q86VI3 1631 aa30.55■■■□□ 2.48
EDEM1-203ENST00000443790 RIMS2Q9UQ26 1411 aa30.53■■■□□ 2.48
EDEM1-203ENST00000443790 PLEKHG1Q9ULL1 1385 aa30.53■■■□□ 2.48
EDEM1-203ENST00000443790 FAM135BQ49AJ0 1406 aa30.5■■■□□ 2.47
EDEM1-203ENST00000443790 PROSER2Q86WR7 435 aaPredicted RBP30.5■■■□□ 2.47
EDEM1-203ENST00000443790 BCANQ96GW7 911 aa30.5■■■□□ 2.47
EDEM1-203ENST00000443790 PHF23Q9BUL5 403 aaPredicted RBP30.49■■■□□ 2.47
EDEM1-203ENST00000443790 PPP1R15AO75807 674 aaPredicted RBP30.47■■■□□ 2.47
EDEM1-203ENST00000443790 HDGFP51858 240 aaKnown RBP30.46■■■□□ 2.47
EDEM1-203ENST00000443790 RBM33Q96EV2 1170 aaKnown RBP30.46■■■□□ 2.47
EDEM1-203ENST00000443790 ITGAEP38570 1179 aa30.45■■■□□ 2.47
EDEM1-203ENST00000443790 NUP155O75694 1391 aa30.44■■■□□ 2.46
EDEM1-203ENST00000443790 CHD2O14647 1828 aaKnown RBP30.43■■■□□ 2.46
EDEM1-203ENST00000443790 ROBO1Q9Y6N7 1651 aa30.42■■■□□ 2.46
EDEM1-203ENST00000443790 CHGAP10645 457 aaKnown RBP30.42■■■□□ 2.46
EDEM1-203ENST00000443790 PPARGC1BQ86YN6 1023 aaKnown RBP30.41■■■□□ 2.46
EDEM1-203ENST00000443790 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.41■■■□□ 2.46
EDEM1-203ENST00000443790 MSH6P52701 1360 aa30.4■■■□□ 2.46
EDEM1-203ENST00000443790 TBX22Q9Y458 520 aa30.38■■■□□ 2.45
EDEM1-203ENST00000443790 DIP2AQ14689 1571 aa30.37■■■□□ 2.45
EDEM1-203ENST00000443790 ADAMTS13Q76LX8 1427 aa30.37■■■□□ 2.45
EDEM1-203ENST00000443790 NUTM2DQ5VT03 806 aaPredicted RBP30.34■■■□□ 2.45
EDEM1-203ENST00000443790 SPHKAPQ2M3C7 1700 aa30.3■■■□□ 2.44
EDEM1-203ENST00000443790 NCOA3Q9Y6Q9 1424 aa30.3■■■□□ 2.44
EDEM1-203ENST00000443790 PIK3R4Q99570 1358 aa30.29■■■□□ 2.44
EDEM1-203ENST00000443790 SLAIN2Q9P270 581 aa30.28■■■□□ 2.44
EDEM1-203ENST00000443790 RRBP1Q9P2E9 1410 aaKnown RBP30.28■■■□□ 2.44
EDEM1-203ENST00000443790 TRPM2O94759 1503 aa30.27■■■□□ 2.44
EDEM1-203ENST00000443790 RGS17Q9UGC6 210 aaPredicted RBP30.26■■■□□ 2.43
EDEM1-203ENST00000443790 PHLPP1O60346 1717 aa30.23■■■□□ 2.43
EDEM1-203ENST00000443790 NRXN3Q9Y4C0 1643 aa30.21■■■□□ 2.43
EDEM1-203ENST00000443790 C14orf37Q86TY3 774 aa30.2■■■□□ 2.43
EDEM1-203ENST00000443790 PTPRUQ92729 1446 aa30.2■■■□□ 2.42
EDEM1-203ENST00000443790 SETBP1Q9Y6X0 1596 aa30.2■■■□□ 2.42
EDEM1-203ENST00000443790 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.19■■■□□ 2.42
EDEM1-203ENST00000443790 NAIPQ13075 1403 aa30.18■■■□□ 2.42
EDEM1-203ENST00000443790 COL16A1Q07092 1604 aaPredicted RBP30.17■■■□□ 2.42
EDEM1-203ENST00000443790 CLTCL1P53675 1640 aa30.16■■■□□ 2.42
EDEM1-203ENST00000443790 C19orf44Q9H6X5 657 aa30.16■■■□□ 2.42
EDEM1-203ENST00000443790 AMOTL2Q9Y2J4 779 aa30.16■■■□□ 2.42
EDEM1-203ENST00000443790 CADPS2Q86UW7 1296 aa30.15■■■□□ 2.42
EDEM1-203ENST00000443790 XRN1Q8IZH2 1706 aaKnown RBP30.15■■■□□ 2.42
EDEM1-203ENST00000443790 JCADQ9P266 1359 aa30.15■■■□□ 2.42
EDEM1-203ENST00000443790 ZNF326Q5BKZ1 582 aaKnown RBP30.14■■■□□ 2.42
EDEM1-203ENST00000443790 ATF3P18847 181 aa30.12■■■□□ 2.41
EDEM1-203ENST00000443790 NEXMIFQ5QGS0 1516 aa30.11■■■□□ 2.41
EDEM1-203ENST00000443790 AHDC1Q5TGY3 1603 aaPredicted RBP30.1■■■□□ 2.41
EDEM1-203ENST00000443790 DCCP43146 1447 aa30.08■■■□□ 2.41
EDEM1-203ENST00000443790 HFM1A2PYH4 1435 aa30.07■■■□□ 2.4
EDEM1-203ENST00000443790 POTEAQ6S8J7 498 aa30.07■■■□□ 2.4
EDEM1-203ENST00000443790 METP08581 1390 aa30.06■■■□□ 2.4
EDEM1-203ENST00000443790 KIF1BO60333 1816 aa30.06■■■□□ 2.4
EDEM1-203ENST00000443790 BRINP3Q76B58 766 aa30■■■□□ 2.39
EDEM1-203ENST00000443790 SHPRHQ149N8 1683 aa30■■■□□ 2.39
EDEM1-203ENST00000443790 LRP6O75581 1613 aa30■■■□□ 2.39
EDEM1-203ENST00000443790 SPATA31A6Q5VVP1 1343 aa29.99■■■□□ 2.39
EDEM1-203ENST00000443790 TRIM52Q96A61 297 aa29.99■■■□□ 2.39
EDEM1-203ENST00000443790 MST1RQ04912 1400 aa29.97■■■□□ 2.39
EDEM1-203ENST00000443790 ASXL1Q8IXJ9 1541 aa29.97■■■□□ 2.39
EDEM1-203ENST00000443790 ADGRL3Q9HAR2 1447 aa29.96■■■□□ 2.39
EDEM1-203ENST00000443790 NALCNQ8IZF0 1738 aa29.94■■■□□ 2.38
EDEM1-203ENST00000443790 SLC4A1APQ9BWU0 796 aaKnown RBP29.93■■■□□ 2.38
EDEM1-203ENST00000443790 SETD1AO15047 1707 aaKnown RBP29.93■■■□□ 2.38
EDEM1-203ENST00000443790 NHSL1Q5SYE7 1610 aa29.92■■■□□ 2.38
EDEM1-203ENST00000443790 VGFO15240 615 aaPredicted RBP29.9■■■□□ 2.38
EDEM1-203ENST00000443790 PTCH1Q13635 1447 aa29.89■■■□□ 2.38
EDEM1-203ENST00000443790 MEX3CQ5U5Q3 659 aaKnown RBP29.88■■■□□ 2.37
EDEM1-203ENST00000443790 SETD5Q9C0A6 1442 aa29.88■■■□□ 2.37
EDEM1-203ENST00000443790 RPGRIP1LQ68CZ1 1315 aa29.87■■■□□ 2.37
EDEM1-203ENST00000443790 PPLO60437 1756 aa29.86■■■□□ 2.37
EDEM1-203ENST00000443790 PRAG1Q86YV5 1406 aa29.85■■■□□ 2.37
EDEM1-203ENST00000443790 ROBO2Q9HCK4 1378 aa29.82■■■□□ 2.36
EDEM1-203ENST00000443790 ZNF772Q68DY9 489 aaPredicted RBP29.81■■■□□ 2.36
EDEM1-203ENST00000443790 C1orf167Q5SNV9 1468 aa29.8■■■□□ 2.36
EDEM1-203ENST00000443790 FOXD1Q16676 465 aa29.79■■■□□ 2.36
EDEM1-203ENST00000443790 NUTM2BA6NNL0 878 aaPredicted RBP29.78■■■□□ 2.36
EDEM1-203ENST00000443790 NUTM2EB1AL46 878 aaPredicted RBP29.78■■■□□ 2.36
EDEM1-203ENST00000443790 NUTM2AQ8IVF1 878 aaPredicted RBP29.78■■■□□ 2.36
EDEM1-203ENST00000443790 LRRC59Q96AG4 307 aaKnown RBP29.78■■■□□ 2.36
EDEM1-203ENST00000443790 DDX17Q92841 729 aaKnown RBP29.77■■■□□ 2.36
EDEM1-203ENST00000443790 CCDC144AA2RUR9 1427 aa29.76■■■□□ 2.35
EDEM1-203ENST00000443790 LAMC1P11047 1609 aa29.74■■■□□ 2.35
EDEM1-203ENST00000443790 PNPLA6Q8IY17 1366 aa29.74■■■□□ 2.35
EDEM1-203ENST00000443790 SPATA31E1Q6ZUB1 1445 aa29.71■■■□□ 2.35
EDEM1-203ENST00000443790 IFT172Q9UG01 1749 aa29.69■■■□□ 2.34
EDEM1-203ENST00000443790 MPHOSPH9Q99550 1183 aa29.69■■■□□ 2.34
EDEM1-203ENST00000443790 ADGRF5Q8IZF2 1346 aa29.69■■■□□ 2.34
EDEM1-203ENST00000443790 AFF2P51816 1311 aa29.68■■■□□ 2.34
EDEM1-203ENST00000443790 ORAI2Q96SN7 254 aa29.67■■■□□ 2.34
EDEM1-203ENST00000443790 CDC42BPGQ6DT37 1551 aa29.67■■■□□ 2.34
EDEM1-203ENST00000443790 ANKRD30BQ9BXX2 1392 aa29.65■■■□□ 2.34
EDEM1-203ENST00000443790 RXRBP28702 533 aa29.65■■■□□ 2.34
EDEM1-203ENST00000443790 SOS2Q07890 1332 aaPredicted RBP29.65■■■□□ 2.34
EDEM1-203ENST00000443790 RGL3Q3MIN7 710 aa29.64■■■□□ 2.34
EDEM1-203ENST00000443790 CDK12Q9NYV4 1490 aaPredicted RBP29.63■■■□□ 2.33
EDEM1-203ENST00000443790 TECPR2O15040 1411 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms