RNA–Protein interactions for RNA: ENST00000443218.1

ODC1-203, Transcript of ornithine decarboxylase 1, humanhuman

TSL 2

Gene ODC1, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ODC1-203ENST00000443218 ADGRL2O95490 1459 aa25.64■■□□□ 1.69
ODC1-203ENST00000443218 SLC52A1Q9NWF4 448 aa25.62■■□□□ 1.69
ODC1-203ENST00000443218 CHD2O14647 1828 aaKnown RBP25.6■■□□□ 1.69
ODC1-203ENST00000443218 PHLPP1O60346 1717 aa25.6■■□□□ 1.69
ODC1-203ENST00000443218 MSH6P52701 1360 aa25.59■■□□□ 1.69
ODC1-203ENST00000443218 SLAIN2Q9P270 581 aa25.59■■□□□ 1.69
ODC1-203ENST00000443218 GCC2Q8IWJ2 1684 aa25.58■■□□□ 1.69
ODC1-203ENST00000443218 APLP2Q06481 763 aa25.58■■□□□ 1.69
ODC1-203ENST00000443218 TMEM131LA2VDJ0 1609 aa25.58■■□□□ 1.69
ODC1-203ENST00000443218 RPRD2Q5VT52 1461 aaKnown RBP25.58■■□□□ 1.69
ODC1-203ENST00000443218 PLEKHG1Q9ULL1 1385 aa25.57■■□□□ 1.68
ODC1-203ENST00000443218 SETD1AO15047 1707 aaKnown RBP25.57■■□□□ 1.68
ODC1-203ENST00000443218 RIMS2Q9UQ26 1411 aa25.56■■□□□ 1.68
ODC1-203ENST00000443218 BCANQ96GW7 911 aa25.56■■□□□ 1.68
ODC1-203ENST00000443218 ANKRD50Q9ULJ7 1429 aa25.55■■□□□ 1.68
ODC1-203ENST00000443218 COL16A1Q07092 1604 aaPredicted RBP25.55■■□□□ 1.68
ODC1-203ENST00000443218 JCADQ9P266 1359 aa25.52■■□□□ 1.68
ODC1-203ENST00000443218 LRP6O75581 1613 aa25.5■■□□□ 1.67
ODC1-203ENST00000443218 ADAMTS13Q76LX8 1427 aa25.5■■□□□ 1.67
ODC1-203ENST00000443218 TBX22Q9Y458 520 aa25.49■■□□□ 1.67
ODC1-203ENST00000443218 FAM50AQ14320 339 aaKnown RBP25.48■■□□□ 1.67
ODC1-203ENST00000443218 PPP1R15AO75807 674 aaPredicted RBP25.47■■□□□ 1.67
ODC1-203ENST00000443218 E9PCH4 1651 aa25.47■■□□□ 1.67
ODC1-203ENST00000443218 UNC13BO14795 1591 aa25.47■■□□□ 1.67
ODC1-203ENST00000443218 NUTM2DQ5VT03 806 aaPredicted RBP25.46■■□□□ 1.67
ODC1-203ENST00000443218 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.46■■□□□ 1.67
ODC1-203ENST00000443218 NCOA3Q9Y6Q9 1424 aa25.46■■□□□ 1.67
ODC1-203ENST00000443218 AHDC1Q5TGY3 1603 aaPredicted RBP25.41■■□□□ 1.66
ODC1-203ENST00000443218 CHGAP10645 457 aaKnown RBP25.41■■□□□ 1.66
ODC1-203ENST00000443218 HDGFP51858 240 aaKnown RBP25.41■■□□□ 1.66
ODC1-203ENST00000443218 DIP2AQ14689 1571 aa25.39■■□□□ 1.66
ODC1-203ENST00000443218 PTPRUQ92729 1446 aa25.39■■□□□ 1.66
ODC1-203ENST00000443218 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.38■■□□□ 1.65
ODC1-203ENST00000443218 SHPRHQ149N8 1683 aa25.38■■□□□ 1.65
ODC1-203ENST00000443218 SPATA31A6Q5VVP1 1343 aa25.37■■□□□ 1.65
ODC1-203ENST00000443218 PIK3R4Q99570 1358 aa25.37■■□□□ 1.65
ODC1-203ENST00000443218 C14orf37Q86TY3 774 aa25.37■■□□□ 1.65
ODC1-203ENST00000443218 C19orf44Q9H6X5 657 aa25.37■■□□□ 1.65
ODC1-203ENST00000443218 IQGAP3Q86VI3 1631 aa25.37■■□□□ 1.65
ODC1-203ENST00000443218 CADPS2Q86UW7 1296 aa25.35■■□□□ 1.65
ODC1-203ENST00000443218 NRXN3Q9Y4C0 1643 aa25.33■■□□□ 1.65
ODC1-203ENST00000443218 TRPM2O94759 1503 aa25.32■■□□□ 1.64
ODC1-203ENST00000443218 ATF3P18847 181 aa25.32■■□□□ 1.64
ODC1-203ENST00000443218 BRINP3Q76B58 766 aa25.32■■□□□ 1.64
ODC1-203ENST00000443218 AMOTL2Q9Y2J4 779 aa25.32■■□□□ 1.64
ODC1-203ENST00000443218 UPF1Q92900 1129 aaKnown RBP eCLIP25.31■■□□□ 1.64
ODC1-203ENST00000443218 MEX3CQ5U5Q3 659 aaKnown RBP25.3■■□□□ 1.64
ODC1-203ENST00000443218 ROCK1Q13464 1354 aa25.3■■□□□ 1.64
ODC1-203ENST00000443218 XRN1Q8IZH2 1706 aaKnown RBP25.29■■□□□ 1.64
ODC1-203ENST00000443218 ZNF772Q68DY9 489 aaPredicted RBP25.29■■□□□ 1.64
ODC1-203ENST00000443218 TRIM52Q96A61 297 aa25.29■■□□□ 1.64
ODC1-203ENST00000443218 NUP155O75694 1391 aa25.26■■□□□ 1.63
ODC1-203ENST00000443218 ASXL1Q8IXJ9 1541 aa25.26■■□□□ 1.63
ODC1-203ENST00000443218 SETBP1Q9Y6X0 1596 aa25.25■■□□□ 1.63
ODC1-203ENST00000443218 DCCP43146 1447 aa25.24■■□□□ 1.63
ODC1-203ENST00000443218 MST1RQ04912 1400 aa25.24■■□□□ 1.63
ODC1-203ENST00000443218 NUTM2BA6NNL0 878 aaPredicted RBP25.23■■□□□ 1.63
ODC1-203ENST00000443218 NUTM2EB1AL46 878 aaPredicted RBP25.23■■□□□ 1.63
ODC1-203ENST00000443218 NUTM2AQ8IVF1 878 aaPredicted RBP25.23■■□□□ 1.63
ODC1-203ENST00000443218 NHSL1Q5SYE7 1610 aa25.23■■□□□ 1.63
ODC1-203ENST00000443218 METP08581 1390 aa25.22■■□□□ 1.63
ODC1-203ENST00000443218 SETD5Q9C0A6 1442 aa25.21■■□□□ 1.63
ODC1-203ENST00000443218 RXRBP28702 533 aa25.2■■□□□ 1.62
ODC1-203ENST00000443218 SPHKAPQ2M3C7 1700 aa25.19■■□□□ 1.62
ODC1-203ENST00000443218 DDX17Q92841 729 aaKnown RBP25.18■■□□□ 1.62
ODC1-203ENST00000443218 AFF2P51816 1311 aa25.17■■□□□ 1.62
ODC1-203ENST00000443218 CDK12Q9NYV4 1490 aaPredicted RBP25.17■■□□□ 1.62
ODC1-203ENST00000443218 NALCNQ8IZF0 1738 aa25.15■■□□□ 1.62
ODC1-203ENST00000443218 ITGAEP38570 1179 aa25.14■■□□□ 1.62
ODC1-203ENST00000443218 ADGRL3Q9HAR2 1447 aa25.12■■□□□ 1.61
ODC1-203ENST00000443218 NEXMIFQ5QGS0 1516 aa25.12■■□□□ 1.61
ODC1-203ENST00000443218 PNPLA6Q8IY17 1366 aa25.12■■□□□ 1.61
ODC1-203ENST00000443218 CLTCL1P53675 1640 aa25.12■■□□□ 1.61
ODC1-203ENST00000443218 ZNF326Q5BKZ1 582 aaKnown RBP25.1■■□□□ 1.61
ODC1-203ENST00000443218 LRRC59Q96AG4 307 aaKnown RBP25.1■■□□□ 1.61
ODC1-203ENST00000443218 RGS12O14924 1447 aa25.1■■□□□ 1.61
ODC1-203ENST00000443218 C8orf37Q96NL8 207 aa25.08■■□□□ 1.61
ODC1-203ENST00000443218 C1orf167Q5SNV9 1468 aa25.05■■□□□ 1.6
ODC1-203ENST00000443218 QTRT2Q9H974 415 aaKnown RBP25.05■■□□□ 1.6
ODC1-203ENST00000443218 LAMC1P11047 1609 aa25.04■■□□□ 1.6
ODC1-203ENST00000443218 PPARGC1BQ86YN6 1023 aaKnown RBP25.03■■□□□ 1.6
ODC1-203ENST00000443218 RBM6P78332 1123 aaKnown RBP25.02■■□□□ 1.6
ODC1-203ENST00000443218 ROBO2Q9HCK4 1378 aa25■■□□□ 1.59
ODC1-203ENST00000443218 ADAMTS2O95450 1211 aa24.99■■□□□ 1.59
ODC1-203ENST00000443218 ORAI2Q96SN7 254 aa24.99■■□□□ 1.59
ODC1-203ENST00000443218 KIF1BO60333 1816 aa24.98■■□□□ 1.59
ODC1-203ENST00000443218 PTCH1Q13635 1447 aa24.98■■□□□ 1.59
ODC1-203ENST00000443218 SOS2Q07890 1332 aaPredicted RBP24.97■■□□□ 1.59
ODC1-203ENST00000443218 NGLY1Q96IV0 654 aa24.95■■□□□ 1.58
ODC1-203ENST00000443218 PRAG1Q86YV5 1406 aa24.94■■□□□ 1.58
ODC1-203ENST00000443218 NAIPQ13075 1403 aa24.92■■□□□ 1.58
ODC1-203ENST00000443218 COL22A1Q8NFW1 1626 aaPredicted RBP24.9■■□□□ 1.58
ODC1-203ENST00000443218 USP21Q9UK80 565 aa24.89■■□□□ 1.58
ODC1-203ENST00000443218 FNBP4Q8N3X1 1017 aaPredicted RBP24.88■■□□□ 1.57
ODC1-203ENST00000443218 VGFO15240 615 aaPredicted RBP24.87■■□□□ 1.57
ODC1-203ENST00000443218 PPLO60437 1756 aa24.87■■□□□ 1.57
ODC1-203ENST00000443218 ATRNO75882 1429 aa24.86■■□□□ 1.57
ODC1-203ENST00000443218 MYOM2P54296 1465 aa24.85■■□□□ 1.57
ODC1-203ENST00000443218 RRBP1Q9P2E9 1410 aaKnown RBP24.85■■□□□ 1.57
ODC1-203ENST00000443218 ATAD2Q6PL18 1390 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms