RNA–Protein interactions for RNA: ENST00000442275.1

LCP1-204, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-204ENST00000442275 MSH6P52701 1360 aa31.89■■■□□ 2.7
LCP1-204ENST00000442275 PHLPP1O60346 1717 aa31.87■■■□□ 2.69
LCP1-204ENST00000442275 SETD1AO15047 1707 aaKnown RBP31.85■■■□□ 2.69
LCP1-204ENST00000442275 SLAIN2Q9P270 581 aa31.84■■■□□ 2.69
LCP1-204ENST00000442275 SLC52A1Q9NWF4 448 aa31.83■■■□□ 2.69
LCP1-204ENST00000442275 MYO5BQ9ULV0 1848 aa31.81■■■□□ 2.68
LCP1-204ENST00000442275 PPP1R15AO75807 674 aaPredicted RBP31.79■■■□□ 2.68
LCP1-204ENST00000442275 JCADQ9P266 1359 aa31.79■■■□□ 2.68
LCP1-204ENST00000442275 CHD2O14647 1828 aaKnown RBP31.77■■■□□ 2.68
LCP1-204ENST00000442275 GCC2Q8IWJ2 1684 aa31.76■■■□□ 2.68
LCP1-204ENST00000442275 PLEKHG1Q9ULL1 1385 aa31.76■■■□□ 2.67
LCP1-204ENST00000442275 ZFYVE9O95405 1425 aa31.75■■■□□ 2.67
LCP1-204ENST00000442275 RIMS2Q9UQ26 1411 aa31.75■■■□□ 2.67
LCP1-204ENST00000442275 ADGRL2O95490 1459 aa31.72■■■□□ 2.67
LCP1-204ENST00000442275 RPRD2Q5VT52 1461 aaKnown RBP31.72■■■□□ 2.67
LCP1-204ENST00000442275 C14orf37Q86TY3 774 aa31.72■■■□□ 2.67
LCP1-204ENST00000442275 COL16A1Q07092 1604 aaPredicted RBP31.71■■■□□ 2.67
LCP1-204ENST00000442275 CHGAP10645 457 aaKnown RBP31.7■■■□□ 2.67
LCP1-204ENST00000442275 FAM50AQ14320 339 aaKnown RBP31.7■■■□□ 2.67
LCP1-204ENST00000442275 ANKRD50Q9ULJ7 1429 aa31.69■■■□□ 2.66
LCP1-204ENST00000442275 HDGFP51858 240 aaKnown RBP31.69■■■□□ 2.66
LCP1-204ENST00000442275 TMEM131LA2VDJ0 1609 aa31.68■■■□□ 2.66
LCP1-204ENST00000442275 NUTM2DQ5VT03 806 aaPredicted RBP31.67■■■□□ 2.66
LCP1-204ENST00000442275 MEX3CQ5U5Q3 659 aaKnown RBP31.66■■■□□ 2.66
LCP1-204ENST00000442275 LRP6O75581 1613 aa31.66■■■□□ 2.66
LCP1-204ENST00000442275 TBX22Q9Y458 520 aa31.64■■■□□ 2.66
LCP1-204ENST00000442275 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.61■■■□□ 2.65
LCP1-204ENST00000442275 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.61■■■□□ 2.65
LCP1-204ENST00000442275 SPATA31A6Q5VVP1 1343 aa31.6■■■□□ 2.65
LCP1-204ENST00000442275 NCOA3Q9Y6Q9 1424 aa31.59■■■□□ 2.65
LCP1-204ENST00000442275 TRIM52Q96A61 297 aa31.59■■■□□ 2.65
LCP1-204ENST00000442275 ADAMTS13Q76LX8 1427 aa31.58■■■□□ 2.65
LCP1-204ENST00000442275 ATF3P18847 181 aa31.58■■■□□ 2.65
LCP1-204ENST00000442275 ZNF772Q68DY9 489 aaPredicted RBP31.57■■■□□ 2.64
LCP1-204ENST00000442275 CADPS2Q86UW7 1296 aa31.57■■■□□ 2.64
LCP1-204ENST00000442275 C19orf44Q9H6X5 657 aa31.56■■■□□ 2.64
LCP1-204ENST00000442275 AHDC1Q5TGY3 1603 aaPredicted RBP31.56■■■□□ 2.64
LCP1-204ENST00000442275 E9PCH4 1651 aa31.54■■■□□ 2.64
LCP1-204ENST00000442275 UNC13BO14795 1591 aa31.54■■■□□ 2.64
LCP1-204ENST00000442275 DIP2AQ14689 1571 aa31.54■■■□□ 2.64
LCP1-204ENST00000442275 SHPRHQ149N8 1683 aa31.54■■■□□ 2.64
LCP1-204ENST00000442275 UPF1Q92900 1129 aaKnown RBP eCLIP31.51■■■□□ 2.63
LCP1-204ENST00000442275 NUTM2BA6NNL0 878 aaPredicted RBP31.5■■■□□ 2.63
LCP1-204ENST00000442275 NUTM2EB1AL46 878 aaPredicted RBP31.5■■■□□ 2.63
LCP1-204ENST00000442275 NUTM2AQ8IVF1 878 aaPredicted RBP31.5■■■□□ 2.63
LCP1-204ENST00000442275 PIK3R4Q99570 1358 aa31.49■■■□□ 2.63
LCP1-204ENST00000442275 AMOTL2Q9Y2J4 779 aa31.49■■■□□ 2.63
LCP1-204ENST00000442275 TRPM2O94759 1503 aa31.48■■■□□ 2.63
LCP1-204ENST00000442275 BRINP3Q76B58 766 aa31.47■■■□□ 2.63
LCP1-204ENST00000442275 PTPRUQ92729 1446 aa31.46■■■□□ 2.63
LCP1-204ENST00000442275 RXRBP28702 533 aa31.44■■■□□ 2.62
LCP1-204ENST00000442275 IQGAP3Q86VI3 1631 aa31.42■■■□□ 2.62
LCP1-204ENST00000442275 ASXL1Q8IXJ9 1541 aa31.39■■■□□ 2.61
LCP1-204ENST00000442275 AFF2P51816 1311 aa31.37■■■□□ 2.61
LCP1-204ENST00000442275 NUP155O75694 1391 aa31.37■■■□□ 2.61
LCP1-204ENST00000442275 DCCP43146 1447 aa31.35■■■□□ 2.61
LCP1-204ENST00000442275 XRN1Q8IZH2 1706 aaKnown RBP31.34■■■□□ 2.61
LCP1-204ENST00000442275 NRXN3Q9Y4C0 1643 aa31.34■■■□□ 2.61
LCP1-204ENST00000442275 MST1RQ04912 1400 aa31.32■■■□□ 2.61
LCP1-204ENST00000442275 ROCK1Q13464 1354 aa31.31■■■□□ 2.6
LCP1-204ENST00000442275 NHSL1Q5SYE7 1610 aa31.31■■■□□ 2.6
LCP1-204ENST00000442275 CDK12Q9NYV4 1490 aaPredicted RBP31.31■■■□□ 2.6
LCP1-204ENST00000442275 SETD5Q9C0A6 1442 aa31.31■■■□□ 2.6
LCP1-204ENST00000442275 ITGAEP38570 1179 aa31.3■■■□□ 2.6
LCP1-204ENST00000442275 ZNF326Q5BKZ1 582 aaKnown RBP31.3■■■□□ 2.6
LCP1-204ENST00000442275 DDX17Q92841 729 aaKnown RBP31.29■■■□□ 2.6
LCP1-204ENST00000442275 SETBP1Q9Y6X0 1596 aa31.29■■■□□ 2.6
LCP1-204ENST00000442275 C8orf37Q96NL8 207 aa31.28■■■□□ 2.6
LCP1-204ENST00000442275 LRRC59Q96AG4 307 aaKnown RBP31.27■■■□□ 2.6
LCP1-204ENST00000442275 METP08581 1390 aa31.26■■■□□ 2.59
LCP1-204ENST00000442275 SPHKAPQ2M3C7 1700 aa31.24■■■□□ 2.59
LCP1-204ENST00000442275 RGS12O14924 1447 aa31.23■■■□□ 2.59
LCP1-204ENST00000442275 QTRT2Q9H974 415 aaKnown RBP31.22■■■□□ 2.59
LCP1-204ENST00000442275 PNPLA6Q8IY17 1366 aa31.21■■■□□ 2.59
LCP1-204ENST00000442275 ADGRL3Q9HAR2 1447 aa31.21■■■□□ 2.59
LCP1-204ENST00000442275 NALCNQ8IZF0 1738 aa31.2■■■□□ 2.58
LCP1-204ENST00000442275 RBM6P78332 1123 aaKnown RBP31.18■■■□□ 2.58
LCP1-204ENST00000442275 ADAMTS2O95450 1211 aa31.16■■■□□ 2.58
LCP1-204ENST00000442275 NGLY1Q96IV0 654 aa31.14■■■□□ 2.58
LCP1-204ENST00000442275 NEXMIFQ5QGS0 1516 aa31.12■■■□□ 2.57
LCP1-204ENST00000442275 CLTCL1P53675 1640 aa31.11■■■□□ 2.57
LCP1-204ENST00000442275 C1orf167Q5SNV9 1468 aa31.1■■■□□ 2.57
LCP1-204ENST00000442275 PPARGC1BQ86YN6 1023 aaKnown RBP31.06■■■□□ 2.56
LCP1-204ENST00000442275 ORAI2Q96SN7 254 aa31.05■■■□□ 2.56
LCP1-204ENST00000442275 KIF1BO60333 1816 aa31.04■■■□□ 2.56
LCP1-204ENST00000442275 USP21Q9UK80 565 aa31.03■■■□□ 2.56
LCP1-204ENST00000442275 SRCAPQ6ZRS2 3230 aa31.02■■■□□ 2.56
LCP1-204ENST00000442275 LAMC1P11047 1609 aa31.01■■■□□ 2.55
LCP1-204ENST00000442275 ROBO2Q9HCK4 1378 aa31.01■■■□□ 2.55
LCP1-204ENST00000442275 ATAD2Q6PL18 1390 aa31■■■□□ 2.55
LCP1-204ENST00000442275 SOS2Q07890 1332 aaPredicted RBP30.99■■■□□ 2.55
LCP1-204ENST00000442275 PTCH1Q13635 1447 aa30.99■■■□□ 2.55
LCP1-204ENST00000442275 TRPC5Q9UL62 973 aaPredicted RBP30.97■■■□□ 2.55
LCP1-204ENST00000442275 VGFO15240 615 aaPredicted RBP30.93■■■□□ 2.54
LCP1-204ENST00000442275 FNBP4Q8N3X1 1017 aaPredicted RBP30.91■■■□□ 2.54
LCP1-204ENST00000442275 COL22A1Q8NFW1 1626 aaPredicted RBP30.89■■■□□ 2.54
LCP1-204ENST00000442275 ATRNO75882 1429 aa30.89■■■□□ 2.53
LCP1-204ENST00000442275 ESCO1Q5FWF5 840 aa30.86■■■□□ 2.53
LCP1-204ENST00000442275 HFM1A2PYH4 1435 aa30.86■■■□□ 2.53
LCP1-204ENST00000442275 XPCQ01831 940 aaPredicted RBP30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms