RNA–Protein interactions for RNA: ENST00000441124.5

HDLBP-218, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-218ENST00000441124 CHIC2Q9UKJ5 165 aa29.16■■■□□ 2.26
HDLBP-218ENST00000441124 LRP6O75581 1613 aa29.16■■■□□ 2.26
HDLBP-218ENST00000441124 KDM5AP29375 1690 aaKnown RBP29.15■■■□□ 2.26
HDLBP-218ENST00000441124 SPATA31A6Q5VVP1 1343 aa29.15■■■□□ 2.26
HDLBP-218ENST00000441124 SLC52A1Q9NWF4 448 aa29.12■■■□□ 2.25
HDLBP-218ENST00000441124 COL16A1Q07092 1604 aaPredicted RBP29.12■■■□□ 2.25
HDLBP-218ENST00000441124 NOS1P29475 1434 aa29.11■■■□□ 2.25
HDLBP-218ENST00000441124 LMTK2Q8IWU2 1503 aa29.11■■■□□ 2.25
HDLBP-218ENST00000441124 DAPK1P53355 1430 aa29.11■■■□□ 2.25
HDLBP-218ENST00000441124 RXRBP28702 533 aa29.09■■■□□ 2.25
HDLBP-218ENST00000441124 FGD6Q6ZV73 1430 aa29.09■■■□□ 2.25
HDLBP-218ENST00000441124 CROCC2H7BZ55 1655 aa29.09■■■□□ 2.25
HDLBP-218ENST00000441124 NUTM2BA6NNL0 878 aaPredicted RBP29.08■■■□□ 2.25
HDLBP-218ENST00000441124 NUTM2EB1AL46 878 aaPredicted RBP29.08■■■□□ 2.25
HDLBP-218ENST00000441124 NUTM2AQ8IVF1 878 aaPredicted RBP29.08■■■□□ 2.25
HDLBP-218ENST00000441124 ANKRD30AQ9BXX3 1397 aa29.08■■■□□ 2.25
HDLBP-218ENST00000441124 PLEKHG1Q9ULL1 1385 aa29.08■■■□□ 2.25
HDLBP-218ENST00000441124 ATF3P18847 181 aa29.06■■■□□ 2.24
HDLBP-218ENST00000441124 HDGFP51858 240 aaKnown RBP29.06■■■□□ 2.24
HDLBP-218ENST00000441124 PTPN23Q9H3S7 1636 aa29.05■■■□□ 2.24
HDLBP-218ENST00000441124 RIMS2Q9UQ26 1411 aa29.05■■■□□ 2.24
HDLBP-218ENST00000441124 CHGAP10645 457 aaKnown RBP29.04■■■□□ 2.24
HDLBP-218ENST00000441124 CADPS2Q86UW7 1296 aa29.03■■■□□ 2.24
HDLBP-218ENST00000441124 ZFYVE9O95405 1425 aa29.03■■■□□ 2.24
HDLBP-218ENST00000441124 NUTM2DQ5VT03 806 aaPredicted RBP29.01■■■□□ 2.23
HDLBP-218ENST00000441124 TBX22Q9Y458 520 aa29■■■□□ 2.23
HDLBP-218ENST00000441124 C19orf44Q9H6X5 657 aa28.99■■■□□ 2.23
HDLBP-218ENST00000441124 NCOA3Q9Y6Q9 1424 aa28.98■■■□□ 2.23
HDLBP-218ENST00000441124 CHD2O14647 1828 aaKnown RBP28.98■■■□□ 2.23
HDLBP-218ENST00000441124 AHDC1Q5TGY3 1603 aaPredicted RBP28.96■■■□□ 2.23
HDLBP-218ENST00000441124 LOC105371045A0A1W2PR82 267 aa28.96■■■□□ 2.23
HDLBP-218ENST00000441124 APLP2Q06481 763 aa28.96■■■□□ 2.23
HDLBP-218ENST00000441124 AFF2P51816 1311 aa28.95■■■□□ 2.23
HDLBP-218ENST00000441124 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.95■■■□□ 2.22
HDLBP-218ENST00000441124 SHPRHQ149N8 1683 aa28.93■■■□□ 2.22
HDLBP-218ENST00000441124 BRINP3Q76B58 766 aa28.93■■■□□ 2.22
HDLBP-218ENST00000441124 RPRD2Q5VT52 1461 aaKnown RBP28.91■■■□□ 2.22
HDLBP-218ENST00000441124 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.9■■■□□ 2.22
HDLBP-218ENST00000441124 CDK12Q9NYV4 1490 aaPredicted RBP28.9■■■□□ 2.22
HDLBP-218ENST00000441124 GCC2Q8IWJ2 1684 aa28.89■■■□□ 2.22
HDLBP-218ENST00000441124 ADAMTS13Q76LX8 1427 aa28.88■■■□□ 2.21
HDLBP-218ENST00000441124 MYO5BQ9ULV0 1848 aa28.87■■■□□ 2.21
HDLBP-218ENST00000441124 AMOTL2Q9Y2J4 779 aa28.87■■■□□ 2.21
HDLBP-218ENST00000441124 TMEM131LA2VDJ0 1609 aa28.87■■■□□ 2.21
HDLBP-218ENST00000441124 C8orf37Q96NL8 207 aa28.86■■■□□ 2.21
HDLBP-218ENST00000441124 PIK3R4Q99570 1358 aa28.84■■■□□ 2.21
HDLBP-218ENST00000441124 ANKRD50Q9ULJ7 1429 aa28.84■■■□□ 2.21
HDLBP-218ENST00000441124 DIP2AQ14689 1571 aa28.84■■■□□ 2.21
HDLBP-218ENST00000441124 FAM50AQ14320 339 aaKnown RBP28.83■■■□□ 2.21
HDLBP-218ENST00000441124 QTRT2Q9H974 415 aaKnown RBP28.83■■■□□ 2.21
HDLBP-218ENST00000441124 RGS12O14924 1447 aa28.82■■■□□ 2.2
HDLBP-218ENST00000441124 RBM6P78332 1123 aaKnown RBP28.81■■■□□ 2.2
HDLBP-218ENST00000441124 ASXL1Q8IXJ9 1541 aa28.79■■■□□ 2.2
HDLBP-218ENST00000441124 ADGRL2O95490 1459 aa28.79■■■□□ 2.2
HDLBP-218ENST00000441124 LRRC59Q96AG4 307 aaKnown RBP28.79■■■□□ 2.2
HDLBP-218ENST00000441124 PTPRUQ92729 1446 aa28.78■■■□□ 2.2
HDLBP-218ENST00000441124 TRPM2O94759 1503 aa28.78■■■□□ 2.2
HDLBP-218ENST00000441124 SETD5Q9C0A6 1442 aa28.77■■■□□ 2.2
HDLBP-218ENST00000441124 DDX17Q92841 729 aaKnown RBP28.77■■■□□ 2.2
HDLBP-218ENST00000441124 ADAMTS2O95450 1211 aa28.74■■■□□ 2.19
HDLBP-218ENST00000441124 DCCP43146 1447 aa28.74■■■□□ 2.19
HDLBP-218ENST00000441124 NGLY1Q96IV0 654 aa28.73■■■□□ 2.19
HDLBP-218ENST00000441124 MST1RQ04912 1400 aa28.72■■■□□ 2.19
HDLBP-218ENST00000441124 PNPLA6Q8IY17 1366 aa28.7■■■□□ 2.18
HDLBP-218ENST00000441124 ATAD2Q6PL18 1390 aa28.67■■■□□ 2.18
HDLBP-218ENST00000441124 SRCAPQ6ZRS2 3230 aa28.67■■■□□ 2.18
HDLBP-218ENST00000441124 UNC13BO14795 1591 aa28.65■■■□□ 2.18
HDLBP-218ENST00000441124 NHSL1Q5SYE7 1610 aa28.65■■■□□ 2.18
HDLBP-218ENST00000441124 ZNF326Q5BKZ1 582 aaKnown RBP28.63■■■□□ 2.17
HDLBP-218ENST00000441124 ZRANB1Q9UGI0 708 aa28.63■■■□□ 2.17
HDLBP-218ENST00000441124 E9PCH4 1651 aa28.63■■■□□ 2.17
HDLBP-218ENST00000441124 FOXD1Q16676 465 aa28.62■■■□□ 2.17
HDLBP-218ENST00000441124 USP21Q9UK80 565 aa28.62■■■□□ 2.17
HDLBP-218ENST00000441124 METP08581 1390 aa28.6■■■□□ 2.17
HDLBP-218ENST00000441124 XRN1Q8IZH2 1706 aaKnown RBP28.59■■■□□ 2.17
HDLBP-218ENST00000441124 ADGRL3Q9HAR2 1447 aa28.59■■■□□ 2.17
HDLBP-218ENST00000441124 NUP155O75694 1391 aa28.56■■■□□ 2.16
HDLBP-218ENST00000441124 TRPC5Q9UL62 973 aaPredicted RBP28.56■■■□□ 2.16
HDLBP-218ENST00000441124 NRXN3Q9Y4C0 1643 aa28.53■■■□□ 2.16
HDLBP-218ENST00000441124 SETBP1Q9Y6X0 1596 aa28.53■■■□□ 2.16
HDLBP-218ENST00000441124 C1orf167Q5SNV9 1468 aa28.51■■■□□ 2.15
HDLBP-218ENST00000441124 IQGAP3Q86VI3 1631 aa28.5■■■□□ 2.15
HDLBP-218ENST00000441124 ORAI2Q96SN7 254 aa28.49■■■□□ 2.15
HDLBP-218ENST00000441124 FNBP4Q8N3X1 1017 aaPredicted RBP28.46■■■□□ 2.15
HDLBP-218ENST00000441124 NALCNQ8IZF0 1738 aa28.46■■■□□ 2.15
HDLBP-218ENST00000441124 SOS2Q07890 1332 aaPredicted RBP28.45■■■□□ 2.15
HDLBP-218ENST00000441124 ATRNO75882 1429 aa28.44■■■□□ 2.14
HDLBP-218ENST00000441124 PTCH1Q13635 1447 aa28.44■■■□□ 2.14
HDLBP-218ENST00000441124 ITGAEP38570 1179 aa28.44■■■□□ 2.14
HDLBP-218ENST00000441124 ROCK1Q13464 1354 aa28.42■■■□□ 2.14
HDLBP-218ENST00000441124 CCDC125Q86Z20 511 aa28.4■■■□□ 2.14
HDLBP-218ENST00000441124 ROBO2Q9HCK4 1378 aa28.36■■■□□ 2.13
HDLBP-218ENST00000441124 XPCQ01831 940 aaPredicted RBP28.33■■■□□ 2.13
HDLBP-218ENST00000441124 ESCO1Q5FWF5 840 aa28.33■■■□□ 2.13
HDLBP-218ENST00000441124 GJD4Q96KN9 370 aaPredicted RBP28.33■■■□□ 2.13
HDLBP-218ENST00000441124 NEXMIFQ5QGS0 1516 aa28.33■■■□□ 2.13
HDLBP-218ENST00000441124 LAMC1P11047 1609 aa28.32■■■□□ 2.12
HDLBP-218ENST00000441124 SPHKAPQ2M3C7 1700 aa28.32■■■□□ 2.12
HDLBP-218ENST00000441124 BCL9LQ86UU0 1499 aa28.31■■■□□ 2.12
HDLBP-218ENST00000441124 NPHP3Q7Z494 1330 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms