RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 INO80Q9ULG1 1556 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-202ENST00000441024 GOLGA6L6A8MZA4 724 aa8.06□□□□□ -1.12
CNOT1-202ENST00000441024 ARHGEF5Q12774 1597 aa8.06□□□□□ -1.12
CNOT1-202ENST00000441024 VWDEQ8N2E2 1590 aa8.06□□□□□ -1.12
CNOT1-202ENST00000441024 MAGI2Q86UL8 1455 aa8.06□□□□□ -1.12
CNOT1-202ENST00000441024 PLXNC1O60486 1568 aa8.06□□□□□ -1.12
CNOT1-202ENST00000441024 CNTLNQ9NXG0 1405 aa8.06□□□□□ -1.12
CNOT1-202ENST00000441024 FGD1P98174 961 aa8.06□□□□□ -1.12
CNOT1-202ENST00000441024 IFT172Q9UG01 1749 aa8.06□□□□□ -1.12
CNOT1-202ENST00000441024 TRAK1Q9UPV9 953 aa8.05□□□□□ -1.12
CNOT1-202ENST00000441024 HFM1A2PYH4 1435 aa8.05□□□□□ -1.12
CNOT1-202ENST00000441024 KDM6BO15054 1643 aa8.05□□□□□ -1.12
CNOT1-202ENST00000441024 KIAA1211Q6ZU35 1233 aa8.04□□□□□ -1.12
CNOT1-202ENST00000441024 GBP4Q96PP9 640 aa8.04□□□□□ -1.12
CNOT1-202ENST00000441024 SOX12O15370 315 aa8.04□□□□□ -1.12
CNOT1-202ENST00000441024 CENPQQ7L2Z9 268 aaPredicted RBP8.04□□□□□ -1.12
CNOT1-202ENST00000441024 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.04□□□□□ -1.12
CNOT1-202ENST00000441024 SAMD9LQ8IVG5 1584 aa8.04□□□□□ -1.12
CNOT1-202ENST00000441024 TSHZ2Q9NRE2 1034 aa8.04□□□□□ -1.12
CNOT1-202ENST00000441024 KDM5DQ9BY66 1539 aa8.03□□□□□ -1.12
CNOT1-202ENST00000441024 PAK3O75914 559 aaPredicted RBP8.03□□□□□ -1.12
CNOT1-202ENST00000441024 IPO9Q96P70 1041 aaKnown RBP8.03□□□□□ -1.12
CNOT1-202ENST00000441024 KDM5CP41229 1560 aa8.03□□□□□ -1.12
CNOT1-202ENST00000441024 EPRSP07814 1512 aaKnown RBP8.03□□□□□ -1.12
CNOT1-202ENST00000441024 NRDCO43847 1150 aa8.03□□□□□ -1.12
CNOT1-202ENST00000441024 NGDNQ8NEJ9 315 aaKnown RBP8.03□□□□□ -1.12
CNOT1-202ENST00000441024 GOLGA6L4A6NEF3 574 aa8.03□□□□□ -1.12
CNOT1-202ENST00000441024 CCDC146Q8IYE0 955 aa8.03□□□□□ -1.12
CNOT1-202ENST00000441024 TROQ12816 1431 aaPredicted RBP8.03□□□□□ -1.12
CNOT1-202ENST00000441024 UNC13BO14795 1591 aa8.02□□□□□ -1.12
CNOT1-202ENST00000441024 RRP1P56182 461 aaKnown RBP8.02□□□□□ -1.12
CNOT1-202ENST00000441024 AAMPQ13685 434 aa8.02□□□□□ -1.12
CNOT1-202ENST00000441024 GPATCH3Q96I76 525 aa8.02□□□□□ -1.12
CNOT1-202ENST00000441024 ARHGAP5Q13017 1502 aa8.02□□□□□ -1.13
CNOT1-202ENST00000441024 KIF7Q2M1P5 1343 aa8.02□□□□□ -1.13
CNOT1-202ENST00000441024 ZNF644Q9H582 1327 aaPredicted RBP8.02□□□□□ -1.13
CNOT1-202ENST00000441024 COG3Q96JB2 828 aa8.02□□□□□ -1.13
CNOT1-202ENST00000441024 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.02□□□□□ -1.13
CNOT1-202ENST00000441024 BRD4O60885 1362 aaPredicted RBP8.02□□□□□ -1.13
CNOT1-202ENST00000441024 WASHC2AQ641Q2 1341 aa8.01□□□□□ -1.13
CNOT1-202ENST00000441024 AMPHP49418 695 aa8.01□□□□□ -1.13
CNOT1-202ENST00000441024 PRG4Q92954 1404 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-202ENST00000441024 POLR1AO95602 1720 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-202ENST00000441024 CSB-PGBD3P0DP91 1061 aa8.01□□□□□ -1.13
CNOT1-202ENST00000441024 ZKSCAN2Q63HK3 967 aa8.01□□□□□ -1.13
CNOT1-202ENST00000441024 KIAA1107Q9UPP5 1409 aa8.01□□□□□ -1.13
CNOT1-202ENST00000441024 REREQ9P2R6 1566 aa8□□□□□ -1.13
CNOT1-202ENST00000441024 NPHP1O15259 732 aa8□□□□□ -1.13
CNOT1-202ENST00000441024 HTATSF1O43719 755 aaKnown RBP8□□□□□ -1.13
CNOT1-202ENST00000441024 RNF17Q9BXT8 1623 aaKnown RBP8□□□□□ -1.13
CNOT1-202ENST00000441024 DNTTIP2Q5QJE6 756 aaKnown RBP8□□□□□ -1.13
CNOT1-202ENST00000441024 NEURL4Q96JN8 1562 aa7.99□□□□□ -1.13
CNOT1-202ENST00000441024 DIP2BQ9P265 1576 aa7.99□□□□□ -1.13
CNOT1-202ENST00000441024 ROCK1Q13464 1354 aa7.99□□□□□ -1.13
CNOT1-202ENST00000441024 NUTM2DQ5VT03 806 aaPredicted RBP7.99□□□□□ -1.13
CNOT1-202ENST00000441024 SCAPERQ9BY12 1400 aa7.99□□□□□ -1.13
CNOT1-202ENST00000441024 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.99□□□□□ -1.13
CNOT1-202ENST00000441024 PTPN23Q9H3S7 1636 aa7.99□□□□□ -1.13
CNOT1-202ENST00000441024 C9orf84Q5VXU9 1444 aa7.99□□□□□ -1.13
CNOT1-202ENST00000441024 SYAP1Q96A49 352 aaPredicted RBP7.99□□□□□ -1.13
CNOT1-202ENST00000441024 KIDINS220Q9ULH0 1771 aa7.98□□□□□ -1.13
CNOT1-202ENST00000441024 RUNDC1Q96C34 613 aa7.98□□□□□ -1.13
CNOT1-202ENST00000441024 DEKP35659 375 aaKnown RBP7.98□□□□□ -1.13
CNOT1-202ENST00000441024 FAM161AQ3B820 660 aa7.98□□□□□ -1.13
CNOT1-202ENST00000441024 ADGRL2O95490 1459 aa7.98□□□□□ -1.13
CNOT1-202ENST00000441024 DIAPH1O60610 1272 aaKnown RBP7.98□□□□□ -1.13
CNOT1-202ENST00000441024 NAP1L2Q9ULW6 460 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-202ENST00000441024 EIF2AK4Q9P2K8 1649 aaKnown RBP7.97□□□□□ -1.13
CNOT1-202ENST00000441024 USP35Q9P2H5 1018 aa7.97□□□□□ -1.13
CNOT1-202ENST00000441024 DAPK1P53355 1430 aa7.97□□□□□ -1.13
CNOT1-202ENST00000441024 AKNAQ7Z591 1439 aa7.97□□□□□ -1.13
CNOT1-202ENST00000441024 CSPP1Q1MSJ5 1256 aa7.97□□□□□ -1.13
CNOT1-202ENST00000441024 DDX19BQ9UMR2 479 aa7.97□□□□□ -1.13
CNOT1-202ENST00000441024 MFAP1P55081 439 aaKnown RBP7.96□□□□□ -1.13
CNOT1-202ENST00000441024 API5Q9BZZ5 524 aaKnown RBP7.96□□□□□ -1.13
CNOT1-202ENST00000441024 APBB1O00213 710 aa7.96□□□□□ -1.14
CNOT1-202ENST00000441024 CLUAP1Q96AJ1 413 aa7.96□□□□□ -1.14
CNOT1-202ENST00000441024 CHMP4CQ96CF2 233 aa7.96□□□□□ -1.14
CNOT1-202ENST00000441024 ATP10BO94823 1461 aa7.96□□□□□ -1.14
CNOT1-202ENST00000441024 MINK1Q8N4C8 1332 aaPredicted RBP7.96□□□□□ -1.14
CNOT1-202ENST00000441024 ZMYM4Q5VZL5 1548 aa7.96□□□□□ -1.14
CNOT1-202ENST00000441024 ABCC1P33527 1531 aa7.96□□□□□ -1.14
CNOT1-202ENST00000441024 APAF1O14727 1248 aa7.95□□□□□ -1.14
CNOT1-202ENST00000441024 MSNP26038 577 aaKnown RBP7.95□□□□□ -1.14
CNOT1-202ENST00000441024 PDE4AP27815 886 aa7.95□□□□□ -1.14
CNOT1-202ENST00000441024 CHAF1AQ13111 956 aaPredicted RBP7.95□□□□□ -1.14
CNOT1-202ENST00000441024 EXOC6Q8TAG9 804 aa7.95□□□□□ -1.14
CNOT1-202ENST00000441024 NAP1L5Q96NT1 182 aaPredicted RBP7.95□□□□□ -1.14
CNOT1-202ENST00000441024 CRBNQ96SW2 442 aa7.95□□□□□ -1.14
CNOT1-202ENST00000441024 CDK13Q14004 1512 aaKnown RBP7.95□□□□□ -1.14
CNOT1-202ENST00000441024 MBD5Q9P267 1494 aa7.95□□□□□ -1.14
CNOT1-202ENST00000441024 ST18O60284 1047 aa7.95□□□□□ -1.14
CNOT1-202ENST00000441024 PLCB2Q00722 1185 aa7.95□□□□□ -1.14
CNOT1-202ENST00000441024 RRP7AQ9Y3A4 280 aaKnown RBP7.95□□□□□ -1.14
CNOT1-202ENST00000441024 FANCIQ9NVI1 1328 aa7.95□□□□□ -1.14
CNOT1-202ENST00000441024 SETD1AO15047 1707 aaKnown RBP7.94□□□□□ -1.14
CNOT1-202ENST00000441024 CYB5RLQ6IPT4 315 aa7.94□□□□□ -1.14
CNOT1-202ENST00000441024 SLC4A10Q6U841 1118 aa7.94□□□□□ -1.14
CNOT1-202ENST00000441024 SPRYD3Q8NCJ5 442 aa7.94□□□□□ -1.14
CNOT1-202ENST00000441024 GNAI1P63096 354 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms