RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 PRDM2Q13029 1718 aa14.76□□□□□ -0.05
SMPD4-209ENST00000439886 C22orf23Q9BZE7 217 aa14.76□□□□□ -0.05
SMPD4-209ENST00000439886 E9PSI1 815 aa14.76□□□□□ -0.05
SMPD4-209ENST00000439886 MRE11P49959 708 aa14.76□□□□□ -0.05
SMPD4-209ENST00000439886 USP19O94966 1318 aa14.76□□□□□ -0.05
SMPD4-209ENST00000439886 CTTNBP2Q8WZ74 1663 aa14.75□□□□□ -0.05
SMPD4-209ENST00000439886 ZHX1Q9UKY1 873 aaPredicted RBP14.75□□□□□ -0.05
SMPD4-209ENST00000439886 CALD1Q05682 793 aaKnown RBP14.74□□□□□ -0.05
SMPD4-209ENST00000439886 PMFBP1Q8TBY8 1022 aa14.74□□□□□ -0.05
SMPD4-209ENST00000439886 CLCN1P35523 988 aa14.74□□□□□ -0.05
SMPD4-209ENST00000439886 RWDD1Q9H446 243 aaPredicted RBP14.74□□□□□ -0.05
SMPD4-209ENST00000439886 CCDC144AA2RUR9 1427 aa14.74□□□□□ -0.05
SMPD4-209ENST00000439886 URB2Q14146 1524 aaKnown RBP14.74□□□□□ -0.05
SMPD4-209ENST00000439886 GTF2E1P29083 439 aaPredicted RBP14.74□□□□□ -0.05
SMPD4-209ENST00000439886 PRDM4Q9UKN5 801 aa14.74□□□□□ -0.05
SMPD4-209ENST00000439886 HAP1P54257 671 aaPredicted RBP14.73□□□□□ -0.05
SMPD4-209ENST00000439886 FAM13BQ9NYF5 915 aa14.73□□□□□ -0.05
SMPD4-209ENST00000439886 PCDHB15Q9Y5E8 787 aa14.73□□□□□ -0.05
SMPD4-209ENST00000439886 LRRIQ1Q96JM4 1722 aa14.73□□□□□ -0.05
SMPD4-209ENST00000439886 KDM5CP41229 1560 aa14.73□□□□□ -0.05
SMPD4-209ENST00000439886 RALGAPBQ86X10 1494 aa14.72□□□□□ -0.05
SMPD4-209ENST00000439886 ABCA5Q8WWZ7 1642 aa14.72□□□□□ -0.05
SMPD4-209ENST00000439886 TPRNQ4KMQ1 711 aa14.72□□□□□ -0.05
SMPD4-209ENST00000439886 CHMP4AQ9BY43 222 aa14.71□□□□□ -0.05
SMPD4-209ENST00000439886 MSNP26038 577 aaKnown RBP14.71□□□□□ -0.05
SMPD4-209ENST00000439886 TBC1D32Q96NH3 1257 aa14.71□□□□□ -0.05
SMPD4-209ENST00000439886 ITPRIPQ8IWB1 547 aa14.7□□□□□ -0.06
SMPD4-209ENST00000439886 TESK2Q96S53 571 aa14.7□□□□□ -0.06
SMPD4-209ENST00000439886 KIAA1211Q6ZU35 1233 aa14.69□□□□□ -0.06
SMPD4-209ENST00000439886 CUL7Q14999 1698 aa14.69□□□□□ -0.06
SMPD4-209ENST00000439886 MRC2Q9UBG0 1479 aa14.69□□□□□ -0.06
SMPD4-209ENST00000439886 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
SMPD4-209ENST00000439886 ERBINQ96RT1 1412 aa14.69□□□□□ -0.06
SMPD4-209ENST00000439886 DNMBPQ6XZF7 1577 aa14.69□□□□□ -0.06
SMPD4-209ENST00000439886 DDX11L8A8MPP1 907 aa14.68□□□□□ -0.06
SMPD4-209ENST00000439886 RLBP1P12271 317 aa14.68□□□□□ -0.06
SMPD4-209ENST00000439886 PDCL3Q9H2J4 239 aa14.68□□□□□ -0.06
SMPD4-209ENST00000439886 IPO4Q8TEX9 1081 aaKnown RBP14.68□□□□□ -0.06
SMPD4-209ENST00000439886 ANTXR1Q9H6X2 564 aa14.68□□□□□ -0.06
SMPD4-209ENST00000439886 VGLL3A8MV65 326 aa14.68□□□□□ -0.06
SMPD4-209ENST00000439886 PDE3AQ14432 1141 aa14.68□□□□□ -0.06
SMPD4-209ENST00000439886 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
SMPD4-209ENST00000439886 STAC3Q96MF2 364 aa14.67□□□□□ -0.06
SMPD4-209ENST00000439886 CAMSAP2Q08AD1 1489 aa14.67□□□□□ -0.06
SMPD4-209ENST00000439886 CDCA8Q53HL2 280 aa14.67□□□□□ -0.06
SMPD4-209ENST00000439886 BRD2P25440 801 aaKnown RBP14.67□□□□□ -0.06
SMPD4-209ENST00000439886 GBP4Q96PP9 640 aa14.67□□□□□ -0.06
SMPD4-209ENST00000439886 R3HCC1Q9Y3T6 440 aaKnown RBP14.66□□□□□ -0.06
SMPD4-209ENST00000439886 KIF14Q15058 1648 aa14.66□□□□□ -0.06
SMPD4-209ENST00000439886 KIAA0586Q9BVV6 1533 aa14.66□□□□□ -0.06
SMPD4-209ENST00000439886 GOLGA6L22H0YM25 854 aa14.65□□□□□ -0.06
SMPD4-209ENST00000439886 MORC1Q86VD1 984 aa14.65□□□□□ -0.06
SMPD4-209ENST00000439886 DDX49Q9Y6V7 483 aaKnown RBP14.65□□□□□ -0.06
SMPD4-209ENST00000439886 ERBB4Q15303 1308 aa14.65□□□□□ -0.06
SMPD4-209ENST00000439886 BLMP54132 1417 aaPredicted RBP14.65□□□□□ -0.06
SMPD4-209ENST00000439886 LNPKQ9C0E8 428 aa14.65□□□□□ -0.06
SMPD4-209ENST00000439886 ZMYM4Q5VZL5 1548 aa14.65□□□□□ -0.06
SMPD4-209ENST00000439886 WWC1Q8IX03 1113 aa14.65□□□□□ -0.06
SMPD4-209ENST00000439886 SMC4Q9NTJ3 1288 aa14.65□□□□□ -0.06
SMPD4-209ENST00000439886 ARHGEF11O15085 1522 aa14.64□□□□□ -0.07
SMPD4-209ENST00000439886 NKTRP30414 1462 aaKnown RBP14.64□□□□□ -0.07
SMPD4-209ENST00000439886 RSPH4AQ5TD94 716 aa14.64□□□□□ -0.07
SMPD4-209ENST00000439886 MBD5Q9P267 1494 aa14.64□□□□□ -0.07
SMPD4-209ENST00000439886 EIF3AQ14152 1382 aaKnown RBP14.64□□□□□ -0.07
SMPD4-209ENST00000439886 U2SURPO15042 1029 aaKnown RBP14.63□□□□□ -0.07
SMPD4-209ENST00000439886 FOXD4L5Q5VV16 416 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-209ENST00000439886 FOXD4L4Q8WXT5 416 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-209ENST00000439886 ZFP91Q96JP5 570 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-209ENST00000439886 SAMD9Q5K651 1589 aa14.63□□□□□ -0.07
SMPD4-209ENST00000439886 TCP11L2Q8N4U5 519 aa14.63□□□□□ -0.07
SMPD4-209ENST00000439886 U2AF1L5P0DN76 240 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-209ENST00000439886 U2AF1Q01081 240 aaKnown RBP eCLIP14.62□□□□□ -0.07
SMPD4-209ENST00000439886 TNPO1Q92973 898 aaKnown RBP14.62□□□□□ -0.07
SMPD4-209ENST00000439886 POLR1AO95602 1720 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-209ENST00000439886 NASPP49321 788 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-209ENST00000439886 GAS2L3Q86XJ1 694 aa14.62□□□□□ -0.07
SMPD4-209ENST00000439886 C9orf84Q5VXU9 1444 aa14.62□□□□□ -0.07
SMPD4-209ENST00000439886 RARSP54136 660 aaKnown RBP14.62□□□□□ -0.07
SMPD4-209ENST00000439886 TSR2Q969E8 191 aaKnown RBP14.62□□□□□ -0.07
SMPD4-209ENST00000439886 FSD2A1L4K1 749 aa14.61□□□□□ -0.07
SMPD4-209ENST00000439886 UHRF1BP1Q6BDS2 1440 aa14.61□□□□□ -0.07
SMPD4-209ENST00000439886 DNTTIP2Q5QJE6 756 aaKnown RBP14.61□□□□□ -0.07
SMPD4-209ENST00000439886 PLEKHH2Q8IVE3 1493 aa14.61□□□□□ -0.07
SMPD4-209ENST00000439886 PRDM10Q9NQV6 1147 aa14.6□□□□□ -0.07
SMPD4-209ENST00000439886 MPNDQ8N594 471 aa14.6□□□□□ -0.07
SMPD4-209ENST00000439886 DNMT1P26358 1616 aaKnown RBP14.6□□□□□ -0.07
SMPD4-209ENST00000439886 DZIP1LQ8IYY4 767 aaKnown RBP14.59□□□□□ -0.07
SMPD4-209ENST00000439886 PTMAP06454 111 aaKnown RBP14.59□□□□□ -0.07
SMPD4-209ENST00000439886 MAPK8IP2Q13387 824 aaPredicted RBP14.59□□□□□ -0.07
SMPD4-209ENST00000439886 ZKSCAN2Q63HK3 967 aa14.59□□□□□ -0.07
SMPD4-209ENST00000439886 CDK11BP21127 795 aaKnown RBP14.58□□□□□ -0.08
SMPD4-209ENST00000439886 ZNF521Q96K83 1311 aa14.58□□□□□ -0.08
SMPD4-209ENST00000439886 PRAG1Q86YV5 1406 aa14.58□□□□□ -0.08
SMPD4-209ENST00000439886 TROQ12816 1431 aaPredicted RBP14.58□□□□□ -0.08
SMPD4-209ENST00000439886 TPM2P07951 284 aa14.57□□□□□ -0.08
SMPD4-209ENST00000439886 APBB1O00213 710 aa14.57□□□□□ -0.08
SMPD4-209ENST00000439886 MCTP1Q6DN14 999 aa14.57□□□□□ -0.08
SMPD4-209ENST00000439886 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
SMPD4-209ENST00000439886 XPCQ01831 940 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-209ENST00000439886 ANKRD45Q5TZF3 282 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms