RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 IQGAP1P46940 1657 aa15.48■□□□□ 0.07
UBE2F-213ENST00000439780 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
UBE2F-213ENST00000439780 LTBP4Q8N2S1 1624 aa15.46■□□□□ 0.07
UBE2F-213ENST00000439780 CCDC144AA2RUR9 1427 aa15.45■□□□□ 0.06
UBE2F-213ENST00000439780 ZNF326Q5BKZ1 582 aaKnown RBP15.45■□□□□ 0.06
UBE2F-213ENST00000439780 ANKRD30BQ9BXX2 1392 aa15.45■□□□□ 0.06
UBE2F-213ENST00000439780 KIF1BO60333 1816 aa15.45■□□□□ 0.06
UBE2F-213ENST00000439780 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.44■□□□□ 0.06
UBE2F-213ENST00000439780 SLC26A8Q96RN1 970 aa15.44■□□□□ 0.06
UBE2F-213ENST00000439780 PPP1R15AO75807 674 aaPredicted RBP15.43■□□□□ 0.06
UBE2F-213ENST00000439780 HDGFP51858 240 aaKnown RBP15.43■□□□□ 0.06
UBE2F-213ENST00000439780 CERKQ8TCT0 537 aa15.43■□□□□ 0.06
UBE2F-213ENST00000439780 PLEKHG1Q9ULL1 1385 aa15.43■□□□□ 0.06
UBE2F-213ENST00000439780 SPATA31E1Q6ZUB1 1445 aa15.43■□□□□ 0.06
UBE2F-213ENST00000439780 NEXMIFQ5QGS0 1516 aa15.42■□□□□ 0.06
UBE2F-213ENST00000439780 RGL3Q3MIN7 710 aa15.41■□□□□ 0.06
UBE2F-213ENST00000439780 BCANQ96GW7 911 aa15.41■□□□□ 0.06
UBE2F-213ENST00000439780 ADAMTS13Q76LX8 1427 aa15.4■□□□□ 0.06
UBE2F-213ENST00000439780 STRCP1A6NGW2 1772 aa15.39■□□□□ 0.05
UBE2F-213ENST00000439780 RPGRIP1LQ68CZ1 1315 aa15.38■□□□□ 0.05
UBE2F-213ENST00000439780 TBX22Q9Y458 520 aa15.37■□□□□ 0.05
UBE2F-213ENST00000439780 NRXN3Q9Y4C0 1643 aa15.36■□□□□ 0.05
UBE2F-213ENST00000439780 PPLO60437 1756 aa15.36■□□□□ 0.05
UBE2F-213ENST00000439780 VGFO15240 615 aaPredicted RBP15.35■□□□□ 0.05
UBE2F-213ENST00000439780 PCGF6Q9BYE7 350 aa15.35■□□□□ 0.05
UBE2F-213ENST00000439780 ADGRF5Q8IZF2 1346 aa15.35■□□□□ 0.05
UBE2F-213ENST00000439780 DHX57Q6P158 1386 aaKnown RBP15.35■□□□□ 0.05
UBE2F-213ENST00000439780 SETBP1Q9Y6X0 1596 aa15.34■□□□□ 0.05
UBE2F-213ENST00000439780 KCNA6P17658 529 aa15.34■□□□□ 0.05
UBE2F-213ENST00000439780 CPS1P31327 1500 aa15.33■□□□□ 0.05
UBE2F-213ENST00000439780 LRRC7Q96NW7 1537 aa15.33■□□□□ 0.04
UBE2F-213ENST00000439780 IFT172Q9UG01 1749 aa15.32■□□□□ 0.04
UBE2F-213ENST00000439780 METP08581 1390 aa15.32■□□□□ 0.04
UBE2F-213ENST00000439780 PTPRUQ92729 1446 aa15.32■□□□□ 0.04
UBE2F-213ENST00000439780 DIP2AQ14689 1571 aa15.31■□□□□ 0.04
UBE2F-213ENST00000439780 CHD2O14647 1828 aaKnown RBP15.3■□□□□ 0.04
UBE2F-213ENST00000439780 NWD1Q149M9 1564 aa15.3■□□□□ 0.04
UBE2F-213ENST00000439780 RBM33Q96EV2 1170 aaKnown RBP15.3■□□□□ 0.04
UBE2F-213ENST00000439780 SIN3AQ96ST3 1273 aa15.3■□□□□ 0.04
UBE2F-213ENST00000439780 IQSEC2Q5JU85 1478 aa15.29■□□□□ 0.04
UBE2F-213ENST00000439780 ILDR1Q86SU0 546 aaPredicted RBP15.29■□□□□ 0.04
UBE2F-213ENST00000439780 FBXO41Q8TF61 875 aa15.29■□□□□ 0.04
UBE2F-213ENST00000439780 ALKQ9UM73 1620 aa15.28■□□□□ 0.04
UBE2F-213ENST00000439780 PIK3R4Q99570 1358 aa15.28■□□□□ 0.04
UBE2F-213ENST00000439780 AMOTL2Q9Y2J4 779 aa15.28■□□□□ 0.04
UBE2F-213ENST00000439780 SETD1AO15047 1707 aaKnown RBP15.27■□□□□ 0.04
UBE2F-213ENST00000439780 PROSER2Q86WR7 435 aaPredicted RBP15.27■□□□□ 0.04
UBE2F-213ENST00000439780 NRXN1Q9ULB1 1477 aa15.27■□□□□ 0.03
UBE2F-213ENST00000439780 XIRP1Q702N8 1843 aaKnown RBP15.27■□□□□ 0.03
UBE2F-213ENST00000439780 TMEM94Q12767 1356 aa15.26■□□□□ 0.03
UBE2F-213ENST00000439780 DCAF11Q8TEB1 546 aa15.26■□□□□ 0.03
UBE2F-213ENST00000439780 KDM2AQ9Y2K7 1162 aa15.26■□□□□ 0.03
UBE2F-213ENST00000439780 NKTRP30414 1462 aaKnown RBP15.26■□□□□ 0.03
UBE2F-213ENST00000439780 MYOM2P54296 1465 aa15.26■□□□□ 0.03
UBE2F-213ENST00000439780 PIK3C2GO75747 1445 aa15.26■□□□□ 0.03
UBE2F-213ENST00000439780 XRN1Q8IZH2 1706 aaKnown RBP15.23■□□□□ 0.03
UBE2F-213ENST00000439780 UBAP1LF5GYI3 381 aa15.23■□□□□ 0.03
UBE2F-213ENST00000439780 NEUROD1Q13562 356 aa15.23■□□□□ 0.03
UBE2F-213ENST00000439780 CFAP70Q5T0N1 1121 aa15.23■□□□□ 0.03
UBE2F-213ENST00000439780 C14orf93Q9H972 538 aaKnown RBP15.23■□□□□ 0.03
UBE2F-213ENST00000439780 TMEM132EQ6IEE7 984 aa15.22■□□□□ 0.03
UBE2F-213ENST00000439780 ASXL1Q8IXJ9 1541 aa15.22■□□□□ 0.03
UBE2F-213ENST00000439780 L3MBTL2Q969R5 705 aa15.2■□□□□ 0.02
UBE2F-213ENST00000439780 ROBO2Q9HCK4 1378 aa15.19■□□□□ 0.02
UBE2F-213ENST00000439780 STAC3Q96MF2 364 aa15.18■□□□□ 0.02
UBE2F-213ENST00000439780 STK26Q9P289 416 aa15.18■□□□□ 0.02
UBE2F-213ENST00000439780 LRPPRCP42704 1394 aaKnown RBP15.17■□□□□ 0.02
UBE2F-213ENST00000439780 TOM1O60784 492 aa15.17■□□□□ 0.02
UBE2F-213ENST00000439780 PRAG1Q86YV5 1406 aa15.17■□□□□ 0.02
UBE2F-213ENST00000439780 PIP4K2BP78356 416 aa15.16■□□□□ 0.02
UBE2F-213ENST00000439780 NCOA3Q9Y6Q9 1424 aa15.16■□□□□ 0.02
UBE2F-213ENST00000439780 ABCC11Q96J66 1382 aa15.15■□□□□ 0.02
UBE2F-213ENST00000439780 PTCH1Q13635 1447 aa15.15■□□□□ 0.02
UBE2F-213ENST00000439780 YTHDC2Q9H6S0 1430 aaKnown RBP15.15■□□□□ 0.02
UBE2F-213ENST00000439780 ADGRB1O14514 1584 aa15.15■□□□□ 0.02
UBE2F-213ENST00000439780 LAMC1P11047 1609 aa15.14■□□□□ 0.01
UBE2F-213ENST00000439780 MSH6P52701 1360 aa15.14■□□□□ 0.01
UBE2F-213ENST00000439780 C14orf37Q86TY3 774 aa15.14■□□□□ 0.01
UBE2F-213ENST00000439780 TECPR2O15040 1411 aa15.14■□□□□ 0.01
UBE2F-213ENST00000439780 WAPLQ7Z5K2 1190 aa15.13■□□□□ 0.01
UBE2F-213ENST00000439780 C19orf44Q9H6X5 657 aa15.13■□□□□ 0.01
UBE2F-213ENST00000439780 PLEKHH1Q9ULM0 1364 aa15.12■□□□□ 0.01
UBE2F-213ENST00000439780 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.12■□□□□ 0.01
UBE2F-213ENST00000439780 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
UBE2F-213ENST00000439780 NBPF1Q3BBV0 1214 aa15.11■□□□□ 0.01
UBE2F-213ENST00000439780 ADGRL3Q9HAR2 1447 aa15.1■□□□□ 0.01
UBE2F-213ENST00000439780 KNDC1Q76NI1 1749 aa15.1■□□□□ 0.01
UBE2F-213ENST00000439780 NALCNQ8IZF0 1738 aa15.1■□□□□ 0.01
UBE2F-213ENST00000439780 NBPF8Q3BBV2 869 aa15.1■□□□□ 0.01
UBE2F-213ENST00000439780 SLAIN2Q9P270 581 aa15.1■□□□□ 0.01
UBE2F-213ENST00000439780 SIRT1Q96EB6 747 aa15.09■□□□□ 0.01
UBE2F-213ENST00000439780 TRAK1Q9UPV9 953 aa15.09■□□□□ 0.01
UBE2F-213ENST00000439780 ATF3P18847 181 aa15.08■□□□□ 0
UBE2F-213ENST00000439780 TONSLQ96HA7 1378 aa15.08■□□□□ 0
UBE2F-213ENST00000439780 FAM135BQ49AJ0 1406 aa15.08■□□□□ 0
UBE2F-213ENST00000439780 KIAA1210Q9ULL0 1709 aa15.07■□□□□ 0
UBE2F-213ENST00000439780 HSPA1LP34931 641 aa15.07■□□□□ 0
UBE2F-213ENST00000439780 CADPS2Q86UW7 1296 aa15.07■□□□□ 0
UBE2F-213ENST00000439780 PRAM1Q96QH2 718 aa15.07■□□□□ 0
UBE2F-213ENST00000439780 DCCP43146 1447 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 833.4 ms