RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 IDI1Q13907 227 aa14.13□□□□□ -0.15
AC011228.1-201ENST00000439027 ABCB7O75027 752 aa14.12□□□□□ -0.15
AC011228.1-201ENST00000439027 ARHGAP23Q9P227 1491 aa14.11□□□□□ -0.15
AC011228.1-201ENST00000439027 LRRC7Q96NW7 1537 aa14.1□□□□□ -0.15
AC011228.1-201ENST00000439027 TMEM2Q9UHN6 1383 aa14.1□□□□□ -0.15
AC011228.1-201ENST00000439027 BCANQ96GW7 911 aa14.1□□□□□ -0.15
AC011228.1-201ENST00000439027 SLIT1O75093 1534 aa14.1□□□□□ -0.15
AC011228.1-201ENST00000439027 ANKRD50Q9ULJ7 1429 aa14.09□□□□□ -0.15
AC011228.1-201ENST00000439027 LMTK2Q8IWU2 1503 aa14.09□□□□□ -0.15
AC011228.1-201ENST00000439027 PIK3C2BO00750 1634 aa14.08□□□□□ -0.15
AC011228.1-201ENST00000439027 ADGRL2O95490 1459 aa14.08□□□□□ -0.16
AC011228.1-201ENST00000439027 SLC52A1Q9NWF4 448 aa14.08□□□□□ -0.16
AC011228.1-201ENST00000439027 STRCP1A6NGW2 1772 aa14.08□□□□□ -0.16
AC011228.1-201ENST00000439027 ITGAEP38570 1179 aa14.07□□□□□ -0.16
AC011228.1-201ENST00000439027 PPARGC1BQ86YN6 1023 aaKnown RBP14.07□□□□□ -0.16
AC011228.1-201ENST00000439027 SLC26A8Q96RN1 970 aa14.07□□□□□ -0.16
AC011228.1-201ENST00000439027 EFCAB6Q5THR3 1501 aa14.06□□□□□ -0.16
AC011228.1-201ENST00000439027 NOS1P29475 1434 aa14.06□□□□□ -0.16
AC011228.1-201ENST00000439027 CHGAP10645 457 aaKnown RBP14.05□□□□□ -0.16
AC011228.1-201ENST00000439027 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
AC011228.1-201ENST00000439027 KCNA6P17658 529 aa14.04□□□□□ -0.16
AC011228.1-201ENST00000439027 PROSER2Q86WR7 435 aaPredicted RBP14.04□□□□□ -0.16
AC011228.1-201ENST00000439027 ATF5Q9Y2D1 282 aaPredicted RBP14.04□□□□□ -0.16
AC011228.1-201ENST00000439027 SYNMO15061 1565 aa14.04□□□□□ -0.16
AC011228.1-201ENST00000439027 ALKQ9UM73 1620 aa14.04□□□□□ -0.16
AC011228.1-201ENST00000439027 HDGFP51858 240 aaKnown RBP14.02□□□□□ -0.17
AC011228.1-201ENST00000439027 RBM33Q96EV2 1170 aaKnown RBP14.02□□□□□ -0.17
AC011228.1-201ENST00000439027 TMEM94Q12767 1356 aa14.01□□□□□ -0.17
AC011228.1-201ENST00000439027 MED1Q15648 1581 aaPredicted RBP14□□□□□ -0.17
AC011228.1-201ENST00000439027 ADGRB3O60242 1522 aa14□□□□□ -0.17
AC011228.1-201ENST00000439027 RPRD2Q5VT52 1461 aaKnown RBP14□□□□□ -0.17
AC011228.1-201ENST00000439027 KDM5AP29375 1690 aaKnown RBP13.99□□□□□ -0.17
AC011228.1-201ENST00000439027 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
AC011228.1-201ENST00000439027 NUP155O75694 1391 aa13.98□□□□□ -0.17
AC011228.1-201ENST00000439027 ROCK1Q13464 1354 aa13.98□□□□□ -0.17
AC011228.1-201ENST00000439027 NUTM2DQ5VT03 806 aaPredicted RBP13.98□□□□□ -0.17
AC011228.1-201ENST00000439027 TET3O43151 1660 aa13.98□□□□□ -0.17
AC011228.1-201ENST00000439027 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
AC011228.1-201ENST00000439027 PLEKHG1Q9ULL1 1385 aa13.96□□□□□ -0.18
AC011228.1-201ENST00000439027 XIRP1Q702N8 1843 aaKnown RBP13.95□□□□□ -0.18
AC011228.1-201ENST00000439027 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
AC011228.1-201ENST00000439027 POLA2Q14181 598 aa13.95□□□□□ -0.18
AC011228.1-201ENST00000439027 UNC13BO14795 1591 aa13.94□□□□□ -0.18
AC011228.1-201ENST00000439027 ZFYVE9O95405 1425 aa13.94□□□□□ -0.18
AC011228.1-201ENST00000439027 FAM135BQ49AJ0 1406 aa13.94□□□□□ -0.18
AC011228.1-201ENST00000439027 C14orf37Q86TY3 774 aa13.94□□□□□ -0.18
AC011228.1-201ENST00000439027 MYO5BQ9ULV0 1848 aa13.93□□□□□ -0.18
AC011228.1-201ENST00000439027 TBX22Q9Y458 520 aa13.93□□□□□ -0.18
AC011228.1-201ENST00000439027 GCC2Q8IWJ2 1684 aa13.93□□□□□ -0.18
AC011228.1-201ENST00000439027 MSH6P52701 1360 aa13.93□□□□□ -0.18
AC011228.1-201ENST00000439027 TMEM131LA2VDJ0 1609 aa13.91□□□□□ -0.18
AC011228.1-201ENST00000439027 SLAIN2Q9P270 581 aa13.91□□□□□ -0.18
AC011228.1-201ENST00000439027 NKTRP30414 1462 aaKnown RBP13.91□□□□□ -0.18
AC011228.1-201ENST00000439027 E9PCH4 1651 aa13.91□□□□□ -0.18
AC011228.1-201ENST00000439027 ZNF326Q5BKZ1 582 aaKnown RBP13.9□□□□□ -0.18
AC011228.1-201ENST00000439027 IQGAP3Q86VI3 1631 aa13.9□□□□□ -0.19
AC011228.1-201ENST00000439027 NWD1Q149M9 1564 aa13.88□□□□□ -0.19
AC011228.1-201ENST00000439027 ROBO1Q9Y6N7 1651 aa13.86□□□□□ -0.19
AC011228.1-201ENST00000439027 CHD2O14647 1828 aaKnown RBP13.86□□□□□ -0.19
AC011228.1-201ENST00000439027 ATF3P18847 181 aa13.86□□□□□ -0.19
AC011228.1-201ENST00000439027 AMOTL2Q9Y2J4 779 aa13.86□□□□□ -0.19
AC011228.1-201ENST00000439027 ADAMTS13Q76LX8 1427 aa13.86□□□□□ -0.19
AC011228.1-201ENST00000439027 TRIM52Q96A61 297 aa13.85□□□□□ -0.19
AC011228.1-201ENST00000439027 RGS17Q9UGC6 210 aaPredicted RBP13.85□□□□□ -0.19
AC011228.1-201ENST00000439027 CADPS2Q86UW7 1296 aa13.84□□□□□ -0.19
AC011228.1-201ENST00000439027 C19orf44Q9H6X5 657 aa13.84□□□□□ -0.19
AC011228.1-201ENST00000439027 PIK3R4Q99570 1358 aa13.83□□□□□ -0.19
AC011228.1-201ENST00000439027 NCOA3Q9Y6Q9 1424 aa13.82□□□□□ -0.2
AC011228.1-201ENST00000439027 DIP2AQ14689 1571 aa13.81□□□□□ -0.2
AC011228.1-201ENST00000439027 JCADQ9P266 1359 aa13.81□□□□□ -0.2
AC011228.1-201ENST00000439027 RRBP1Q9P2E9 1410 aaKnown RBP13.81□□□□□ -0.2
AC011228.1-201ENST00000439027 TRPM2O94759 1503 aa13.8□□□□□ -0.2
AC011228.1-201ENST00000439027 POTEAQ6S8J7 498 aa13.8□□□□□ -0.2
AC011228.1-201ENST00000439027 NAIPQ13075 1403 aa13.8□□□□□ -0.2
AC011228.1-201ENST00000439027 PTPRUQ92729 1446 aa13.8□□□□□ -0.2
AC011228.1-201ENST00000439027 PHLPP1O60346 1717 aa13.79□□□□□ -0.2
AC011228.1-201ENST00000439027 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
AC011228.1-201ENST00000439027 MEX3CQ5U5Q3 659 aaKnown RBP13.78□□□□□ -0.2
AC011228.1-201ENST00000439027 METP08581 1390 aa13.77□□□□□ -0.21
AC011228.1-201ENST00000439027 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.76□□□□□ -0.21
AC011228.1-201ENST00000439027 BRINP3Q76B58 766 aa13.76□□□□□ -0.21
AC011228.1-201ENST00000439027 VGFO15240 615 aaPredicted RBP13.74□□□□□ -0.21
AC011228.1-201ENST00000439027 CLTCL1P53675 1640 aa13.74□□□□□ -0.21
AC011228.1-201ENST00000439027 SETBP1Q9Y6X0 1596 aa13.74□□□□□ -0.21
AC011228.1-201ENST00000439027 SPATA31A6Q5VVP1 1343 aa13.73□□□□□ -0.21
AC011228.1-201ENST00000439027 NUTM2BA6NNL0 878 aaPredicted RBP13.73□□□□□ -0.21
AC011228.1-201ENST00000439027 NUTM2EB1AL46 878 aaPredicted RBP13.73□□□□□ -0.21
AC011228.1-201ENST00000439027 NUTM2AQ8IVF1 878 aaPredicted RBP13.73□□□□□ -0.21
AC011228.1-201ENST00000439027 HFM1A2PYH4 1435 aa13.73□□□□□ -0.21
AC011228.1-201ENST00000439027 NRXN3Q9Y4C0 1643 aa13.72□□□□□ -0.21
AC011228.1-201ENST00000439027 COL16A1Q07092 1604 aaPredicted RBP13.72□□□□□ -0.21
AC011228.1-201ENST00000439027 NEXMIFQ5QGS0 1516 aa13.71□□□□□ -0.21
AC011228.1-201ENST00000439027 DCCP43146 1447 aa13.71□□□□□ -0.22
AC011228.1-201ENST00000439027 KIF1BO60333 1816 aa13.71□□□□□ -0.22
AC011228.1-201ENST00000439027 RPGRIP1LQ68CZ1 1315 aa13.7□□□□□ -0.22
AC011228.1-201ENST00000439027 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
AC011228.1-201ENST00000439027 XRN1Q8IZH2 1706 aaKnown RBP13.7□□□□□ -0.22
AC011228.1-201ENST00000439027 AHDC1Q5TGY3 1603 aaPredicted RBP13.69□□□□□ -0.22
AC011228.1-201ENST00000439027 ZNF772Q68DY9 489 aaPredicted RBP13.69□□□□□ -0.22
AC011228.1-201ENST00000439027 DDX17Q92841 729 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms