RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 IQGAP1P46940 1657 aa16.87■□□□□ 0.29
SNHG3-202ENST00000437681 NEXMIFQ5QGS0 1516 aa16.85■□□□□ 0.29
SNHG3-202ENST00000437681 SETBP1Q9Y6X0 1596 aa16.84■□□□□ 0.29
SNHG3-202ENST00000437681 SLC24A1O60721 1099 aa16.84■□□□□ 0.29
SNHG3-202ENST00000437681 MYOM2P54296 1465 aa16.84■□□□□ 0.29
SNHG3-202ENST00000437681 DHX57Q6P158 1386 aaKnown RBP16.84■□□□□ 0.29
SNHG3-202ENST00000437681 ANKLE2Q86XL3 938 aa16.83■□□□□ 0.29
SNHG3-202ENST00000437681 PLEKHG1Q9ULL1 1385 aa16.83■□□□□ 0.28
SNHG3-202ENST00000437681 RIMS2Q9UQ26 1411 aa16.83■□□□□ 0.28
SNHG3-202ENST00000437681 LAMC1P11047 1609 aa16.82■□□□□ 0.28
SNHG3-202ENST00000437681 EID1Q9Y6B2 187 aa16.82■□□□□ 0.28
SNHG3-202ENST00000437681 NPHP4O75161 1426 aaPredicted RBP16.81■□□□□ 0.28
SNHG3-202ENST00000437681 NRXN1Q9ULB1 1477 aa16.8■□□□□ 0.28
SNHG3-202ENST00000437681 PIK3R4Q99570 1358 aa16.8■□□□□ 0.28
SNHG3-202ENST00000437681 STAG3Q9UJ98 1225 aa16.79■□□□□ 0.28
SNHG3-202ENST00000437681 IQSEC2Q5JU85 1478 aa16.79■□□□□ 0.28
SNHG3-202ENST00000437681 PRAG1Q86YV5 1406 aa16.78■□□□□ 0.28
SNHG3-202ENST00000437681 PRKCSHP14314 528 aaPredicted RBP16.78■□□□□ 0.28
SNHG3-202ENST00000437681 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
SNHG3-202ENST00000437681 KIAA1210Q9ULL0 1709 aa16.77■□□□□ 0.28
SNHG3-202ENST00000437681 CPS1P31327 1500 aa16.75■□□□□ 0.27
SNHG3-202ENST00000437681 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
SNHG3-202ENST00000437681 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
SNHG3-202ENST00000437681 NRXN3Q9Y4C0 1643 aa16.75■□□□□ 0.27
SNHG3-202ENST00000437681 SETD1AO15047 1707 aaKnown RBP16.74■□□□□ 0.27
SNHG3-202ENST00000437681 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
SNHG3-202ENST00000437681 TXNDC2Q86VQ3 553 aa16.72■□□□□ 0.27
SNHG3-202ENST00000437681 CHD2O14647 1828 aaKnown RBP16.71■□□□□ 0.27
SNHG3-202ENST00000437681 TBX22Q9Y458 520 aa16.71■□□□□ 0.27
SNHG3-202ENST00000437681 HSPA2P54652 639 aa16.7■□□□□ 0.26
SNHG3-202ENST00000437681 NKTRP30414 1462 aaKnown RBP16.7■□□□□ 0.26
SNHG3-202ENST00000437681 KNDC1Q76NI1 1749 aa16.7■□□□□ 0.26
SNHG3-202ENST00000437681 NCOA3Q9Y6Q9 1424 aa16.7■□□□□ 0.26
SNHG3-202ENST00000437681 PIK3C2GO75747 1445 aa16.69■□□□□ 0.26
SNHG3-202ENST00000437681 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
SNHG3-202ENST00000437681 LTKP29376 864 aa16.68■□□□□ 0.26
SNHG3-202ENST00000437681 ADAMTS13Q76LX8 1427 aa16.68■□□□□ 0.26
SNHG3-202ENST00000437681 NCKAP5LQ9HCH0 1330 aa16.68■□□□□ 0.26
SNHG3-202ENST00000437681 FOXD1Q16676 465 aa16.68■□□□□ 0.26
SNHG3-202ENST00000437681 XRN1Q8IZH2 1706 aaKnown RBP16.68■□□□□ 0.26
SNHG3-202ENST00000437681 LTBP4Q8N2S1 1624 aa16.67■□□□□ 0.26
SNHG3-202ENST00000437681 ALKQ9UM73 1620 aa16.67■□□□□ 0.26
SNHG3-202ENST00000437681 ZNF326Q5BKZ1 582 aaKnown RBP16.66■□□□□ 0.26
SNHG3-202ENST00000437681 CHGAP10645 457 aaKnown RBP16.65■□□□□ 0.26
SNHG3-202ENST00000437681 PPP1R15AO75807 674 aaPredicted RBP16.64■□□□□ 0.25
SNHG3-202ENST00000437681 TECPR2O15040 1411 aa16.62■□□□□ 0.25
SNHG3-202ENST00000437681 DLC1Q96QB1 1528 aa16.62■□□□□ 0.25
SNHG3-202ENST00000437681 SIRT1Q96EB6 747 aa16.61■□□□□ 0.25
SNHG3-202ENST00000437681 PTCH1Q13635 1447 aa16.61■□□□□ 0.25
SNHG3-202ENST00000437681 KCNA6P17658 529 aa16.6■□□□□ 0.25
SNHG3-202ENST00000437681 STRCP1A6NGW2 1772 aa16.6■□□□□ 0.25
SNHG3-202ENST00000437681 C14orf93Q9H972 538 aaKnown RBP16.59■□□□□ 0.25
SNHG3-202ENST00000437681 TRPM1Q7Z4N2 1603 aa16.57■□□□□ 0.24
SNHG3-202ENST00000437681 ADGRB1O14514 1584 aa16.57■□□□□ 0.24
SNHG3-202ENST00000437681 LRPPRCP42704 1394 aaKnown RBP16.56■□□□□ 0.24
SNHG3-202ENST00000437681 FAM135BQ49AJ0 1406 aa16.56■□□□□ 0.24
SNHG3-202ENST00000437681 ABCC11Q96J66 1382 aa16.55■□□□□ 0.24
SNHG3-202ENST00000437681 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
SNHG3-202ENST00000437681 TONSLQ96HA7 1378 aa16.54■□□□□ 0.24
SNHG3-202ENST00000437681 ADGRF5Q8IZF2 1346 aa16.54■□□□□ 0.24
SNHG3-202ENST00000437681 DCCP43146 1447 aa16.54■□□□□ 0.24
SNHG3-202ENST00000437681 LRRC7Q96NW7 1537 aa16.54■□□□□ 0.24
SNHG3-202ENST00000437681 XIRP1Q702N8 1843 aaKnown RBP16.53■□□□□ 0.24
SNHG3-202ENST00000437681 GPRASP1Q5JY77 1395 aa16.52■□□□□ 0.24
SNHG3-202ENST00000437681 RGL3Q3MIN7 710 aa16.52■□□□□ 0.23
SNHG3-202ENST00000437681 RALGAPBQ86X10 1494 aa16.52■□□□□ 0.23
SNHG3-202ENST00000437681 PTPRUQ92729 1446 aa16.51■□□□□ 0.23
SNHG3-202ENST00000437681 DCAF11Q8TEB1 546 aa16.51■□□□□ 0.23
SNHG3-202ENST00000437681 ADGRB2O60241 1585 aa16.5■□□□□ 0.23
SNHG3-202ENST00000437681 YTHDC2Q9H6S0 1430 aaKnown RBP16.5■□□□□ 0.23
SNHG3-202ENST00000437681 L3MBTL2Q969R5 705 aa16.49■□□□□ 0.23
SNHG3-202ENST00000437681 METP08581 1390 aa16.49■□□□□ 0.23
SNHG3-202ENST00000437681 SIN3AQ96ST3 1273 aa16.48■□□□□ 0.23
SNHG3-202ENST00000437681 ARHGEF28Q8N1W1 1705 aaKnown RBP16.47■□□□□ 0.23
SNHG3-202ENST00000437681 ZNF335Q9H4Z2 1342 aaPredicted RBP16.47■□□□□ 0.23
SNHG3-202ENST00000437681 BCANQ96GW7 911 aa16.47■□□□□ 0.23
SNHG3-202ENST00000437681 CDC42BPGQ6DT37 1551 aa16.46■□□□□ 0.23
SNHG3-202ENST00000437681 CCER1Q8TC90 406 aaPredicted RBP16.46■□□□□ 0.22
SNHG3-202ENST00000437681 CERKQ8TCT0 537 aa16.46■□□□□ 0.22
SNHG3-202ENST00000437681 SLC26A8Q96RN1 970 aa16.46■□□□□ 0.22
SNHG3-202ENST00000437681 AMOTL2Q9Y2J4 779 aa16.45■□□□□ 0.22
SNHG3-202ENST00000437681 ADGRL3Q9HAR2 1447 aa16.44■□□□□ 0.22
SNHG3-202ENST00000437681 NALCNQ8IZF0 1738 aa16.42■□□□□ 0.22
SNHG3-202ENST00000437681 NEUROD1Q13562 356 aa16.42■□□□□ 0.22
SNHG3-202ENST00000437681 EIF3AQ14152 1382 aaKnown RBP16.42■□□□□ 0.22
SNHG3-202ENST00000437681 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.41■□□□□ 0.22
SNHG3-202ENST00000437681 NUTM2DQ5VT03 806 aaPredicted RBP16.41■□□□□ 0.22
SNHG3-202ENST00000437681 CFAP70Q5T0N1 1121 aa16.4■□□□□ 0.22
SNHG3-202ENST00000437681 TMEM94Q12767 1356 aa16.4■□□□□ 0.22
SNHG3-202ENST00000437681 SBNO2Q9Y2G9 1366 aa16.4■□□□□ 0.22
SNHG3-202ENST00000437681 MSH6P52701 1360 aa16.39■□□□□ 0.21
SNHG3-202ENST00000437681 PROSER2Q86WR7 435 aaPredicted RBP16.39■□□□□ 0.21
SNHG3-202ENST00000437681 FMN2Q9NZ56 1722 aa16.39■□□□□ 0.21
SNHG3-202ENST00000437681 ROBO2Q9HCK4 1378 aa16.38■□□□□ 0.21
SNHG3-202ENST00000437681 KDM2AQ9Y2K7 1162 aa16.38■□□□□ 0.21
SNHG3-202ENST00000437681 C19orf44Q9H6X5 657 aa16.37■□□□□ 0.21
SNHG3-202ENST00000437681 ROCK2O75116 1388 aaKnown RBP16.36■□□□□ 0.21
SNHG3-202ENST00000437681 ANKARQ7Z5J8 1434 aa16.36■□□□□ 0.21
SNHG3-202ENST00000437681 QRICH2Q9H0J4 1663 aa16.35■□□□□ 0.21
SNHG3-202ENST00000437681 KIF1AQ12756 1690 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms