RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 TMEM2Q9UHN6 1383 aa24.29■■□□□ 1.48
CALD1-209ENST00000436461 L3MBTL2Q969R5 705 aa24.28■■□□□ 1.48
CALD1-209ENST00000436461 RIMS2Q9UQ26 1411 aa24.28■■□□□ 1.48
CALD1-209ENST00000436461 ZFYVE9O95405 1425 aa24.26■■□□□ 1.47
CALD1-209ENST00000436461 DCAF11Q8TEB1 546 aa24.26■■□□□ 1.47
CALD1-209ENST00000436461 KDM2AQ9Y2K7 1162 aa24.26■■□□□ 1.47
CALD1-209ENST00000436461 SLIT1O75093 1534 aa24.26■■□□□ 1.47
CALD1-209ENST00000436461 ARHGAP23Q9P227 1491 aa24.25■■□□□ 1.47
CALD1-209ENST00000436461 LTKP29376 864 aa24.24■■□□□ 1.47
CALD1-209ENST00000436461 TXNDC2Q86VQ3 553 aa24.21■■□□□ 1.47
CALD1-209ENST00000436461 RPGRIP1LQ68CZ1 1315 aa24.21■■□□□ 1.47
CALD1-209ENST00000436461 POLR1AO95602 1720 aaPredicted RBP24.2■■□□□ 1.46
CALD1-209ENST00000436461 ADGRF5Q8IZF2 1346 aa24.2■■□□□ 1.46
CALD1-209ENST00000436461 NCKAP5LQ9HCH0 1330 aa24.19■■□□□ 1.46
CALD1-209ENST00000436461 PPP1R15AO75807 674 aaPredicted RBP24.19■■□□□ 1.46
CALD1-209ENST00000436461 SCAF11Q99590 1463 aaKnown RBP24.19■■□□□ 1.46
CALD1-209ENST00000436461 EID1Q9Y6B2 187 aa24.17■■□□□ 1.46
CALD1-209ENST00000436461 STRCQ7RTU9 1775 aa24.17■■□□□ 1.46
CALD1-209ENST00000436461 MYOM2P54296 1465 aa24.16■■□□□ 1.46
CALD1-209ENST00000436461 ANKLE2Q86XL3 938 aa24.16■■□□□ 1.46
CALD1-209ENST00000436461 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.15■■□□□ 1.46
CALD1-209ENST00000436461 VGFO15240 615 aaPredicted RBP24.14■■□□□ 1.46
CALD1-209ENST00000436461 IQGAP1P46940 1657 aa24.13■■□□□ 1.45
CALD1-209ENST00000436461 HDGFP51858 240 aaKnown RBP24.13■■□□□ 1.45
CALD1-209ENST00000436461 NRXN3Q9Y4C0 1643 aa24.12■■□□□ 1.45
CALD1-209ENST00000436461 NBPF8Q3BBV2 869 aa24.11■■□□□ 1.45
CALD1-209ENST00000436461 BCANQ96GW7 911 aa24.11■■□□□ 1.45
CALD1-209ENST00000436461 TIMELESSQ9UNS1 1208 aa24.11■■□□□ 1.45
CALD1-209ENST00000436461 NRXN1Q9ULB1 1477 aa24.11■■□□□ 1.45
CALD1-209ENST00000436461 PRAG1Q86YV5 1406 aa24.11■■□□□ 1.45
CALD1-209ENST00000436461 PIK3C2GO75747 1445 aa24.1■■□□□ 1.45
CALD1-209ENST00000436461 PLEKHG1Q9ULL1 1385 aa24.1■■□□□ 1.45
CALD1-209ENST00000436461 NPHP4O75161 1426 aaPredicted RBP24.08■■□□□ 1.45
CALD1-209ENST00000436461 SETBP1Q9Y6X0 1596 aa24.07■■□□□ 1.44
CALD1-209ENST00000436461 SLC26A8Q96RN1 970 aa24.06■■□□□ 1.44
CALD1-209ENST00000436461 MED14O60244 1454 aa24.06■■□□□ 1.44
CALD1-209ENST00000436461 CFAP70Q5T0N1 1121 aa24.06■■□□□ 1.44
CALD1-209ENST00000436461 SETD1AO15047 1707 aaKnown RBP24.05■■□□□ 1.44
CALD1-209ENST00000436461 ALKQ9UM73 1620 aa24.05■■□□□ 1.44
CALD1-209ENST00000436461 ADAMTS13Q76LX8 1427 aa24.04■■□□□ 1.44
CALD1-209ENST00000436461 STAC3Q96MF2 364 aa24.04■■□□□ 1.44
CALD1-209ENST00000436461 TRPM1Q7Z4N2 1603 aa24.04■■□□□ 1.44
CALD1-209ENST00000436461 NBPF1Q3BBV0 1214 aa24■■□□□ 1.43
CALD1-209ENST00000436461 C14orf93Q9H972 538 aaKnown RBP24■■□□□ 1.43
CALD1-209ENST00000436461 ASXL1Q8IXJ9 1541 aa24■■□□□ 1.43
CALD1-209ENST00000436461 LAMC1P11047 1609 aa23.99■■□□□ 1.43
CALD1-209ENST00000436461 KIAA1210Q9ULL0 1709 aa23.99■■□□□ 1.43
CALD1-209ENST00000436461 TMEM132EQ6IEE7 984 aa23.99■■□□□ 1.43
CALD1-209ENST00000436461 METP08581 1390 aa23.97■■□□□ 1.43
CALD1-209ENST00000436461 DIP2AQ14689 1571 aa23.96■■□□□ 1.43
CALD1-209ENST00000436461 RALGAPBQ86X10 1494 aa23.96■■□□□ 1.43
CALD1-209ENST00000436461 ZEB1P37275 1124 aaPredicted RBP23.95■■□□□ 1.42
CALD1-209ENST00000436461 ADGRB1O14514 1584 aa23.95■■□□□ 1.42
CALD1-209ENST00000436461 TBX22Q9Y458 520 aa23.94■■□□□ 1.42
CALD1-209ENST00000436461 ROCK2O75116 1388 aaKnown RBP23.94■■□□□ 1.42
CALD1-209ENST00000436461 PTPRUQ92729 1446 aa23.91■■□□□ 1.42
CALD1-209ENST00000436461 STK26Q9P289 416 aa23.9■■□□□ 1.42
CALD1-209ENST00000436461 CHD2O14647 1828 aaKnown RBP23.89■■□□□ 1.42
CALD1-209ENST00000436461 STRCP1A6NGW2 1772 aa23.88■■□□□ 1.41
CALD1-209ENST00000436461 DMRT2Q9Y5R5 561 aa23.88■■□□□ 1.41
CALD1-209ENST00000436461 YTHDC2Q9H6S0 1430 aaKnown RBP23.87■■□□□ 1.41
CALD1-209ENST00000436461 CARD11Q9BXL7 1154 aa23.87■■□□□ 1.41
CALD1-209ENST00000436461 GPRASP1Q5JY77 1395 aa23.86■■□□□ 1.41
CALD1-209ENST00000436461 TRAK1Q9UPV9 953 aa23.85■■□□□ 1.41
CALD1-209ENST00000436461 AMOTL2Q9Y2J4 779 aa23.84■■□□□ 1.41
CALD1-209ENST00000436461 ZNF335Q9H4Z2 1342 aaPredicted RBP23.84■■□□□ 1.41
CALD1-209ENST00000436461 XRN1Q8IZH2 1706 aaKnown RBP23.84■■□□□ 1.41
CALD1-209ENST00000436461 LRPPRCP42704 1394 aaKnown RBP23.83■■□□□ 1.4
CALD1-209ENST00000436461 PIK3R4Q99570 1358 aa23.83■■□□□ 1.4
CALD1-209ENST00000436461 KCNA6P17658 529 aa23.82■■□□□ 1.4
CALD1-209ENST00000436461 KNDC1Q76NI1 1749 aa23.82■■□□□ 1.4
CALD1-209ENST00000436461 ARHGEF28Q8N1W1 1705 aaKnown RBP23.82■■□□□ 1.4
CALD1-209ENST00000436461 NWD1Q149M9 1564 aa23.81■■□□□ 1.4
CALD1-209ENST00000436461 ROBO2Q9HCK4 1378 aa23.78■■□□□ 1.4
CALD1-209ENST00000436461 RBM33Q96EV2 1170 aaKnown RBP23.78■■□□□ 1.4
CALD1-209ENST00000436461 ABCC11Q96J66 1382 aa23.78■■□□□ 1.4
CALD1-209ENST00000436461 CPS1P31327 1500 aa23.77■■□□□ 1.4
CALD1-209ENST00000436461 USP47Q96K76 1375 aa23.76■■□□□ 1.39
CALD1-209ENST00000436461 PLEKHH1Q9ULM0 1364 aa23.76■■□□□ 1.39
CALD1-209ENST00000436461 SAFB2Q14151 953 aaKnown RBP eCLIP23.76■■□□□ 1.39
CALD1-209ENST00000436461 WAPLQ7Z5K2 1190 aa23.76■■□□□ 1.39
CALD1-209ENST00000436461 TECPR2O15040 1411 aa23.76■■□□□ 1.39
CALD1-209ENST00000436461 PRAM1Q96QH2 718 aa23.74■■□□□ 1.39
CALD1-209ENST00000436461 HIRIP3Q9BW71 556 aaPredicted RBP23.74■■□□□ 1.39
CALD1-209ENST00000436461 DLC1Q96QB1 1528 aa23.73■■□□□ 1.39
CALD1-209ENST00000436461 PTCH1Q13635 1447 aa23.73■■□□□ 1.39
CALD1-209ENST00000436461 NKTRP30414 1462 aaKnown RBP23.71■■□□□ 1.39
CALD1-209ENST00000436461 QRICH2Q9H0J4 1663 aa23.71■■□□□ 1.39
CALD1-209ENST00000436461 POGKQ9P215 609 aa23.7■■□□□ 1.39
CALD1-209ENST00000436461 ST20-MTHFSA0A0A6YYL1 179 aa23.7■■□□□ 1.38
CALD1-209ENST00000436461 HSPA5P11021 654 aaKnown RBP23.7■■□□□ 1.38
CALD1-209ENST00000436461 XIRP1Q702N8 1843 aaKnown RBP23.69■■□□□ 1.38
CALD1-209ENST00000436461 LTBP4Q8N2S1 1624 aa23.69■■□□□ 1.38
CALD1-209ENST00000436461 PROSER2Q86WR7 435 aaPredicted RBP23.69■■□□□ 1.38
CALD1-209ENST00000436461 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.68■■□□□ 1.38
CALD1-209ENST00000436461 EIF3AQ14152 1382 aaKnown RBP23.68■■□□□ 1.38
CALD1-209ENST00000436461 EIF4G2P78344 907 aaKnown RBP eCLIP23.68■■□□□ 1.38
CALD1-209ENST00000436461 FAM135BQ49AJ0 1406 aa23.68■■□□□ 1.38
CALD1-209ENST00000436461 CENPJQ9HC77 1338 aaPredicted RBP23.68■■□□□ 1.38
CALD1-209ENST00000436461 LRRC7Q96NW7 1537 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms