RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 RALGAPBQ86X10 1494 aa9.36□□□□□ -0.91
GARNL3-205ENST00000435213 ITSN2Q9NZM3 1697 aa9.36□□□□□ -0.91
GARNL3-205ENST00000435213 ABCC5O15440 1437 aa9.36□□□□□ -0.91
GARNL3-205ENST00000435213 BRD4O60885 1362 aaPredicted RBP9.36□□□□□ -0.91
GARNL3-205ENST00000435213 KIF15Q9NS87 1388 aa9.36□□□□□ -0.91
GARNL3-205ENST00000435213 ARID3AQ99856 593 aa9.36□□□□□ -0.91
GARNL3-205ENST00000435213 RRP1P56182 461 aaKnown RBP9.35□□□□□ -0.91
GARNL3-205ENST00000435213 GRIPAP1Q4V328 841 aa9.35□□□□□ -0.91
GARNL3-205ENST00000435213 UHRF1BP1Q6BDS2 1440 aa9.35□□□□□ -0.91
GARNL3-205ENST00000435213 SYNJ2O15056 1496 aa9.35□□□□□ -0.91
GARNL3-205ENST00000435213 ARHGEF12Q9NZN5 1544 aa9.35□□□□□ -0.91
GARNL3-205ENST00000435213 GOLGA6L3A6NEY3 463 aa9.34□□□□□ -0.91
GARNL3-205ENST00000435213 KIAA1107Q9UPP5 1409 aa9.34□□□□□ -0.91
GARNL3-205ENST00000435213 ZMYM4Q5VZL5 1548 aa9.34□□□□□ -0.91
GARNL3-205ENST00000435213 GRIN2AQ12879 1464 aa9.33□□□□□ -0.92
GARNL3-205ENST00000435213 ESPNB1AK53 854 aa9.33□□□□□ -0.92
GARNL3-205ENST00000435213 CLSTN1O94985 981 aa9.33□□□□□ -0.92
GARNL3-205ENST00000435213 PDE4AP27815 886 aa9.33□□□□□ -0.92
GARNL3-205ENST00000435213 PLCD4Q9BRC7 762 aa9.33□□□□□ -0.92
GARNL3-205ENST00000435213 BACH2Q9BYV9 841 aa9.33□□□□□ -0.92
GARNL3-205ENST00000435213 TMC1Q8TDI8 760 aa9.33□□□□□ -0.92
GARNL3-205ENST00000435213 KIAA0556O60303 1618 aa9.33□□□□□ -0.92
GARNL3-205ENST00000435213 MCCP23508 829 aa9.33□□□□□ -0.92
GARNL3-205ENST00000435213 KIAA1211Q6ZU35 1233 aa9.33□□□□□ -0.92
GARNL3-205ENST00000435213 SLC4A1APQ9BWU0 796 aaKnown RBP9.33□□□□□ -0.92
GARNL3-205ENST00000435213 ADGRL2O95490 1459 aa9.32□□□□□ -0.92
GARNL3-205ENST00000435213 MYBBP1AQ9BQG0 1328 aaKnown RBP9.32□□□□□ -0.92
GARNL3-205ENST00000435213 PDE3BQ13370 1112 aa9.32□□□□□ -0.92
GARNL3-205ENST00000435213 FAM13BQ9NYF5 915 aa9.32□□□□□ -0.92
GARNL3-205ENST00000435213 INSRP06213 1382 aa9.31□□□□□ -0.92
GARNL3-205ENST00000435213 RALBP1Q15311 655 aa9.31□□□□□ -0.92
GARNL3-205ENST00000435213 DNAJC2Q99543 621 aaKnown RBP9.31□□□□□ -0.92
GARNL3-205ENST00000435213 ADCY10Q96PN6 1610 aa9.31□□□□□ -0.92
GARNL3-205ENST00000435213 PHF14O94880 888 aa9.31□□□□□ -0.92
GARNL3-205ENST00000435213 RCAN3Q9UKA8 241 aa9.3□□□□□ -0.92
GARNL3-205ENST00000435213 SLC20A2Q08357 652 aa9.3□□□□□ -0.92
GARNL3-205ENST00000435213 EXOC6Q8TAG9 804 aa9.3□□□□□ -0.92
GARNL3-205ENST00000435213 FRAT2O75474 233 aaPredicted RBP9.3□□□□□ -0.92
GARNL3-205ENST00000435213 ZSCAN20P17040 1043 aaPredicted RBP9.29□□□□□ -0.92
GARNL3-205ENST00000435213 RAPGEF6Q8TEU7 1601 aa9.29□□□□□ -0.92
GARNL3-205ENST00000435213 KIAA0586Q9BVV6 1533 aa9.29□□□□□ -0.92
GARNL3-205ENST00000435213 MAPK8IP2Q13387 824 aaPredicted RBP9.29□□□□□ -0.92
GARNL3-205ENST00000435213 CAMSAP2Q08AD1 1489 aa9.29□□□□□ -0.92
GARNL3-205ENST00000435213 PLEKHH2Q8IVE3 1493 aa9.29□□□□□ -0.92
GARNL3-205ENST00000435213 CC2D1BQ5T0F9 858 aaKnown RBP9.29□□□□□ -0.92
GARNL3-205ENST00000435213 E9PSI1 815 aa9.28□□□□□ -0.92
GARNL3-205ENST00000435213 KDM5DQ9BY66 1539 aa9.28□□□□□ -0.92
GARNL3-205ENST00000435213 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.28□□□□□ -0.92
GARNL3-205ENST00000435213 DISP1Q96F81 1524 aa9.28□□□□□ -0.92
GARNL3-205ENST00000435213 VIRMAQ69YN4 1812 aaKnown RBP9.27□□□□□ -0.93
GARNL3-205ENST00000435213 MYCNP04198 464 aaPredicted RBP9.27□□□□□ -0.93
GARNL3-205ENST00000435213 CCDC94Q9BW85 323 aaPredicted RBP9.27□□□□□ -0.93
GARNL3-205ENST00000435213 PARD3Q8TEW0 1356 aa9.26□□□□□ -0.93
GARNL3-205ENST00000435213 PSEN1P49768 467 aa9.26□□□□□ -0.93
GARNL3-205ENST00000435213 ZNF592Q92610 1267 aa9.26□□□□□ -0.93
GARNL3-205ENST00000435213 BLMP54132 1417 aaPredicted RBP9.26□□□□□ -0.93
GARNL3-205ENST00000435213 LAMC1P11047 1609 aa9.26□□□□□ -0.93
GARNL3-205ENST00000435213 MYH16Q9H6N6 1097 aa9.26□□□□□ -0.93
GARNL3-205ENST00000435213 XRCC6P12956 609 aaKnown RBP eCLIP9.25□□□□□ -0.93
GARNL3-205ENST00000435213 RIPK4P57078 832 aa9.25□□□□□ -0.93
GARNL3-205ENST00000435213 TRPM1Q7Z4N2 1603 aa9.25□□□□□ -0.93
GARNL3-205ENST00000435213 NUP153P49790 1475 aaKnown RBP9.25□□□□□ -0.93
GARNL3-205ENST00000435213 TMED8Q6PL24 325 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-205ENST00000435213 NLRP13Q86W25 1043 aa9.25□□□□□ -0.93
GARNL3-205ENST00000435213 YY1AP1Q9H869 796 aa9.25□□□□□ -0.93
GARNL3-205ENST00000435213 SLC52A1Q9NWF4 448 aa9.25□□□□□ -0.93
GARNL3-205ENST00000435213 ABCA8O94911 1581 aa9.25□□□□□ -0.93
GARNL3-205ENST00000435213 SHANK2Q9UPX8 1470 aa9.24□□□□□ -0.93
GARNL3-205ENST00000435213 OFD1O75665 1012 aa9.24□□□□□ -0.93
GARNL3-205ENST00000435213 CDC42BPAQ5VT25 1732 aa9.24□□□□□ -0.93
GARNL3-205ENST00000435213 POGKQ9P215 609 aa9.23□□□□□ -0.93
GARNL3-205ENST00000435213 MRE11P49959 708 aa9.23□□□□□ -0.93
GARNL3-205ENST00000435213 CARD11Q9BXL7 1154 aa9.23□□□□□ -0.93
GARNL3-205ENST00000435213 GEMIN8Q9NWZ8 242 aaKnown RBP9.23□□□□□ -0.93
GARNL3-205ENST00000435213 TROQ12816 1431 aaPredicted RBP9.23□□□□□ -0.93
GARNL3-205ENST00000435213 ANKRD30AQ9BXX3 1397 aa9.23□□□□□ -0.93
GARNL3-205ENST00000435213 FAM43BQ6ZT52 329 aaPredicted RBP9.23□□□□□ -0.93
GARNL3-205ENST00000435213 DYNC1I1O14576 645 aa9.22□□□□□ -0.93
GARNL3-205ENST00000435213 CGNQ9P2M7 1197 aaKnown RBP9.22□□□□□ -0.93
GARNL3-205ENST00000435213 AEBP1Q8IUX7 1158 aa9.22□□□□□ -0.93
GARNL3-205ENST00000435213 CEP120Q8N960 986 aa9.22□□□□□ -0.93
GARNL3-205ENST00000435213 PKD2Q13563 968 aa9.22□□□□□ -0.93
GARNL3-205ENST00000435213 CYB5RLQ6IPT4 315 aa9.22□□□□□ -0.93
GARNL3-205ENST00000435213 ZNF644Q9H582 1327 aaPredicted RBP9.21□□□□□ -0.93
GARNL3-205ENST00000435213 ANKRD50Q9ULJ7 1429 aa9.21□□□□□ -0.94
GARNL3-205ENST00000435213 ISY1Q9ULR0 285 aaKnown RBP9.21□□□□□ -0.94
GARNL3-205ENST00000435213 GPATCH8Q9UKJ3 1502 aaKnown RBP9.21□□□□□ -0.94
GARNL3-205ENST00000435213 TSPYL1Q9H0U9 437 aa9.2□□□□□ -0.94
GARNL3-205ENST00000435213 KDM2BQ8NHM5 1336 aa9.2□□□□□ -0.94
GARNL3-205ENST00000435213 FSD2A1L4K1 749 aa9.2□□□□□ -0.94
GARNL3-205ENST00000435213 OSCARQ8IYS5 282 aa9.2□□□□□ -0.94
GARNL3-205ENST00000435213 PSMD1Q99460 953 aa9.2□□□□□ -0.94
GARNL3-205ENST00000435213 COL17A1Q9UMD9 1497 aaPredicted RBP9.2□□□□□ -0.94
GARNL3-205ENST00000435213 CRBNQ96SW2 442 aa9.19□□□□□ -0.94
GARNL3-205ENST00000435213 PTPRGP23470 1445 aa9.19□□□□□ -0.94
GARNL3-205ENST00000435213 CENPQQ7L2Z9 268 aaPredicted RBP9.19□□□□□ -0.94
GARNL3-205ENST00000435213 SENP3-EIF4A1A0A087X0R7 540 aa9.19□□□□□ -0.94
GARNL3-205ENST00000435213 ST20-MTHFSA0A0A6YYL1 179 aa9.19□□□□□ -0.94
GARNL3-205ENST00000435213 IGSF3O75054 1194 aa9.19□□□□□ -0.94
GARNL3-205ENST00000435213 IRX5P78411 483 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms