RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
CTCFL-209ENST00000433949 SLC52A1Q9NWF4 448 aa16.43■□□□□ 0.22
CTCFL-209ENST00000433949 GPRASP1Q5JY77 1395 aa16.43■□□□□ 0.22
CTCFL-209ENST00000433949 FER1L4A9Z1Z3 1794 aa16.43■□□□□ 0.22
CTCFL-209ENST00000433949 MADDQ8WXG6 1647 aa16.42■□□□□ 0.22
CTCFL-209ENST00000433949 STAC3Q96MF2 364 aa16.42■□□□□ 0.22
CTCFL-209ENST00000433949 PREX1Q8TCU6 1659 aa16.42■□□□□ 0.22
CTCFL-209ENST00000433949 NEURL4Q96JN8 1562 aa16.4■□□□□ 0.22
CTCFL-209ENST00000433949 TNRQ92752 1358 aa16.4■□□□□ 0.22
CTCFL-209ENST00000433949 RIMS1Q86UR5 1692 aaKnown RBP16.39■□□□□ 0.21
CTCFL-209ENST00000433949 ST20-MTHFSA0A0A6YYL1 179 aa16.37■□□□□ 0.21
CTCFL-209ENST00000433949 C3P01024 1663 aa16.37■□□□□ 0.21
CTCFL-209ENST00000433949 SPATA31D1Q6ZQQ2 1576 aa16.37■□□□□ 0.21
CTCFL-209ENST00000433949 SUPT16HQ9Y5B9 1047 aaKnown RBP16.35■□□□□ 0.21
CTCFL-209ENST00000433949 ADAMTSL3P82987 1691 aa16.35■□□□□ 0.21
CTCFL-209ENST00000433949 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
CTCFL-209ENST00000433949 KIF1BO60333 1816 aa16.35■□□□□ 0.21
CTCFL-209ENST00000433949 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
CTCFL-209ENST00000433949 MROH2AA6NES4 1674 aa16.34■□□□□ 0.21
CTCFL-209ENST00000433949 KDM4FA0A1W2PPD8 638 aa16.34■□□□□ 0.21
CTCFL-209ENST00000433949 PIK3C2BO00750 1634 aa16.33■□□□□ 0.21
CTCFL-209ENST00000433949 MRS2Q9HD23 443 aa16.33■□□□□ 0.2
CTCFL-209ENST00000433949 HNRNPUQ00839 825 aaKnown RBP eCLIP16.33■□□□□ 0.2
CTCFL-209ENST00000433949 NBPF1Q3BBV0 1214 aa16.33■□□□□ 0.2
CTCFL-209ENST00000433949 KIAA1210Q9ULL0 1709 aa16.32■□□□□ 0.2
CTCFL-209ENST00000433949 ADGRB3O60242 1522 aa16.32■□□□□ 0.2
CTCFL-209ENST00000433949 POLR3GLQ9BT43 218 aa16.31■□□□□ 0.2
CTCFL-209ENST00000433949 PTPRMP28827 1452 aa16.31■□□□□ 0.2
CTCFL-209ENST00000433949 IQGAP1P46940 1657 aa16.29■□□□□ 0.2
CTCFL-209ENST00000433949 CFAP70Q5T0N1 1121 aa16.29■□□□□ 0.2
CTCFL-209ENST00000433949 TMEM131LA2VDJ0 1609 aa16.29■□□□□ 0.2
CTCFL-209ENST00000433949 A2ML1A8K2U0 1454 aa16.29■□□□□ 0.2
CTCFL-209ENST00000433949 MYO5BQ9ULV0 1848 aa16.29■□□□□ 0.2
CTCFL-209ENST00000433949 VGFO15240 615 aaPredicted RBP16.28■□□□□ 0.2
CTCFL-209ENST00000433949 NEFLP07196 543 aa16.28■□□□□ 0.2
CTCFL-209ENST00000433949 BCANQ96GW7 911 aa16.28■□□□□ 0.2
CTCFL-209ENST00000433949 RPGRIP1LQ68CZ1 1315 aa16.28■□□□□ 0.2
CTCFL-209ENST00000433949 CCDC184Q52MB2 194 aa16.26■□□□□ 0.19
CTCFL-209ENST00000433949 IFT172Q9UG01 1749 aa16.26■□□□□ 0.19
CTCFL-209ENST00000433949 MYOM2P54296 1465 aa16.25■□□□□ 0.19
CTCFL-209ENST00000433949 NLRP1Q9C000 1473 aa16.25■□□□□ 0.19
CTCFL-209ENST00000433949 RALBP1Q15311 655 aa16.25■□□□□ 0.19
CTCFL-209ENST00000433949 TMEM132EQ6IEE7 984 aa16.25■□□□□ 0.19
CTCFL-209ENST00000433949 RIMS2Q9UQ26 1411 aa16.24■□□□□ 0.19
CTCFL-209ENST00000433949 TMF1P82094 1093 aa16.24■□□□□ 0.19
CTCFL-209ENST00000433949 FAM9BQ8IZU0 186 aa16.24■□□□□ 0.19
CTCFL-209ENST00000433949 THEMISQ8N1K5 641 aaPredicted RBP16.24■□□□□ 0.19
CTCFL-209ENST00000433949 TESK2Q96S53 571 aa16.24■□□□□ 0.19
CTCFL-209ENST00000433949 ZBED9Q6R2W3 1325 aa16.24■□□□□ 0.19
CTCFL-209ENST00000433949 LTKP29376 864 aa16.23■□□□□ 0.19
CTCFL-209ENST00000433949 TXNDC2Q86VQ3 553 aa16.23■□□□□ 0.19
CTCFL-209ENST00000433949 NEXMIFQ5QGS0 1516 aa16.23■□□□□ 0.19
CTCFL-209ENST00000433949 TMEM2Q9UHN6 1383 aa16.22■□□□□ 0.19
CTCFL-209ENST00000433949 SCAF11Q99590 1463 aaKnown RBP16.22■□□□□ 0.19
CTCFL-209ENST00000433949 EIF3AQ14152 1382 aaKnown RBP16.21■□□□□ 0.18
CTCFL-209ENST00000433949 SLC24A1O60721 1099 aa16.21■□□□□ 0.18
CTCFL-209ENST00000433949 PPLO60437 1756 aa16.21■□□□□ 0.18
CTCFL-209ENST00000433949 MYO3AQ8NEV4 1616 aa16.2■□□□□ 0.18
CTCFL-209ENST00000433949 BRD4O60885 1362 aaPredicted RBP16.2■□□□□ 0.18
CTCFL-209ENST00000433949 MYBBP1AQ9BQG0 1328 aaKnown RBP16.2■□□□□ 0.18
CTCFL-209ENST00000433949 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
CTCFL-209ENST00000433949 EID1Q9Y6B2 187 aa16.2■□□□□ 0.18
CTCFL-209ENST00000433949 UBR1Q8IWV7 1749 aa16.2■□□□□ 0.18
CTCFL-209ENST00000433949 FKBP8Q14318 412 aa16.19■□□□□ 0.18
CTCFL-209ENST00000433949 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.19■□□□□ 0.18
CTCFL-209ENST00000433949 C14orf93Q9H972 538 aaKnown RBP16.19■□□□□ 0.18
CTCFL-209ENST00000433949 DISP3Q9P2K9 1392 aa16.19■□□□□ 0.18
CTCFL-209ENST00000433949 CDCA8Q53HL2 280 aa16.19■□□□□ 0.18
CTCFL-209ENST00000433949 STK26Q9P289 416 aa16.19■□□□□ 0.18
CTCFL-209ENST00000433949 PIK3C2GO75747 1445 aa16.18■□□□□ 0.18
CTCFL-209ENST00000433949 ZFYVE9O95405 1425 aa16.18■□□□□ 0.18
CTCFL-209ENST00000433949 CEP170BQ9Y4F5 1589 aaPredicted RBP16.18■□□□□ 0.18
CTCFL-209ENST00000433949 HSPA2P54652 639 aa16.17■□□□□ 0.18
CTCFL-209ENST00000433949 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
CTCFL-209ENST00000433949 SLC26A8Q96RN1 970 aa16.17■□□□□ 0.18
CTCFL-209ENST00000433949 TRAK1Q9UPV9 953 aa16.17■□□□□ 0.18
CTCFL-209ENST00000433949 PARD3Q8TEW0 1356 aa16.16■□□□□ 0.18
CTCFL-209ENST00000433949 NRXN1Q9ULB1 1477 aa16.16■□□□□ 0.18
CTCFL-209ENST00000433949 SETD1BQ9UPS6 1966 aaKnown RBP16.16■□□□□ 0.18
CTCFL-209ENST00000433949 PER1O15534 1290 aaPredicted RBP16.15■□□□□ 0.18
CTCFL-209ENST00000433949 PNISRQ8TF01 805 aaKnown RBP16.14■□□□□ 0.17
CTCFL-209ENST00000433949 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
CTCFL-209ENST00000433949 ANKLE2Q86XL3 938 aa16.14■□□□□ 0.17
CTCFL-209ENST00000433949 NLRP13Q86W25 1043 aa16.13■□□□□ 0.17
CTCFL-209ENST00000433949 KDM5AP29375 1690 aaKnown RBP16.13■□□□□ 0.17
CTCFL-209ENST00000433949 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
CTCFL-209ENST00000433949 LRPPRCP42704 1394 aaKnown RBP16.12■□□□□ 0.17
CTCFL-209ENST00000433949 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
CTCFL-209ENST00000433949 ERICH6BQ5W0A0 696 aa16.11■□□□□ 0.17
CTCFL-209ENST00000433949 CNGB1Q14028 1251 aaPredicted RBP16.1■□□□□ 0.17
CTCFL-209ENST00000433949 PANK3Q9H999 370 aa16.1■□□□□ 0.17
CTCFL-209ENST00000433949 METP08581 1390 aa16.09■□□□□ 0.17
CTCFL-209ENST00000433949 ARHGAP23Q9P227 1491 aa16.09■□□□□ 0.17
CTCFL-209ENST00000433949 SLIT1O75093 1534 aa16.09■□□□□ 0.17
CTCFL-209ENST00000433949 ALKQ9UM73 1620 aa16.08■□□□□ 0.17
CTCFL-209ENST00000433949 PLEKHG1Q9ULL1 1385 aa16.08■□□□□ 0.16
CTCFL-209ENST00000433949 SBNO2Q9Y2G9 1366 aa16.08■□□□□ 0.16
CTCFL-209ENST00000433949 MYOM1P52179 1685 aa16.08■□□□□ 0.16
CTCFL-209ENST00000433949 INSRP06213 1382 aa16.07■□□□□ 0.16
CTCFL-209ENST00000433949 SMG6Q86US8 1419 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms