RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 LRRIQ1Q96JM4 1722 aa4.9□□□□□ -1.62
SHPRH-205ENST00000433355 SMG6Q86US8 1419 aaKnown RBP4.9□□□□□ -1.62
SHPRH-205ENST00000433355 PRKCSHP14314 528 aaPredicted RBP4.9□□□□□ -1.63
SHPRH-205ENST00000433355 LRPPRCP42704 1394 aaKnown RBP4.9□□□□□ -1.63
SHPRH-205ENST00000433355 CENPJQ9HC77 1338 aaPredicted RBP4.9□□□□□ -1.63
SHPRH-205ENST00000433355 BECN1Q14457 450 aa4.9□□□□□ -1.63
SHPRH-205ENST00000433355 RANGAP1P46060 587 aaPredicted RBP4.9□□□□□ -1.63
SHPRH-205ENST00000433355 PRAG1Q86YV5 1406 aa4.9□□□□□ -1.63
SHPRH-205ENST00000433355 ITGAEP38570 1179 aa4.89□□□□□ -1.63
SHPRH-205ENST00000433355 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.89□□□□□ -1.63
SHPRH-205ENST00000433355 PTPRTO14522 1441 aa4.89□□□□□ -1.63
SHPRH-205ENST00000433355 FBLN2P98095 1184 aa4.89□□□□□ -1.63
SHPRH-205ENST00000433355 WDR43Q15061 677 aaKnown RBP eCLIP4.89□□□□□ -1.63
SHPRH-205ENST00000433355 VWDEQ8N2E2 1590 aa4.89□□□□□ -1.63
SHPRH-205ENST00000433355 ZBTB47Q9UFB7 747 aaPredicted RBP4.89□□□□□ -1.63
SHPRH-205ENST00000433355 AGLP35573 1532 aa4.89□□□□□ -1.63
SHPRH-205ENST00000433355 ATP10BO94823 1461 aa4.89□□□□□ -1.63
SHPRH-205ENST00000433355 PKD2Q13563 968 aa4.89□□□□□ -1.63
SHPRH-205ENST00000433355 SOS1Q07889 1333 aaPredicted RBP4.89□□□□□ -1.63
SHPRH-205ENST00000433355 GTF3C3Q9Y5Q9 886 aa4.88□□□□□ -1.63
SHPRH-205ENST00000433355 DENND4BO75064 1496 aaPredicted RBP4.88□□□□□ -1.63
SHPRH-205ENST00000433355 CDC42BPBQ9Y5S2 1711 aa4.88□□□□□ -1.63
SHPRH-205ENST00000433355 PPM1GO15355 546 aaPredicted RBP4.88□□□□□ -1.63
SHPRH-205ENST00000433355 IPO8O15397 1037 aaKnown RBP4.88□□□□□ -1.63
SHPRH-205ENST00000433355 AEBP2Q6ZN18 517 aaPredicted RBP4.88□□□□□ -1.63
SHPRH-205ENST00000433355 MYO3AQ8NEV4 1616 aa4.88□□□□□ -1.63
SHPRH-205ENST00000433355 OSCARQ8IYS5 282 aa4.88□□□□□ -1.63
SHPRH-205ENST00000433355 TCERG1O14776 1098 aaKnown RBP4.88□□□□□ -1.63
SHPRH-205ENST00000433355 PRKRIP1Q9H875 184 aaPredicted RBP4.88□□□□□ -1.63
SHPRH-205ENST00000433355 SPATA31E1Q6ZUB1 1445 aa4.88□□□□□ -1.63
SHPRH-205ENST00000433355 ZCCHC11Q5TAX3 1644 aaKnown RBP4.87□□□□□ -1.63
SHPRH-205ENST00000433355 PZPP20742 1482 aa4.87□□□□□ -1.63
SHPRH-205ENST00000433355 PPIP5K1Q6PFW1 1433 aa4.87□□□□□ -1.63
SHPRH-205ENST00000433355 PARD3Q8TEW0 1356 aa4.87□□□□□ -1.63
SHPRH-205ENST00000433355 EVC2Q86UK5 1308 aa4.87□□□□□ -1.63
SHPRH-205ENST00000433355 FANCIQ9NVI1 1328 aa4.87□□□□□ -1.63
SHPRH-205ENST00000433355 MED14O60244 1454 aa4.87□□□□□ -1.63
SHPRH-205ENST00000433355 HNRNPUQ00839 825 aaKnown RBP eCLIP4.86□□□□□ -1.63
SHPRH-205ENST00000433355 TRAPPC8Q9Y2L5 1435 aa4.86□□□□□ -1.63
SHPRH-205ENST00000433355 EHMT2Q96KQ7 1210 aa4.86□□□□□ -1.63
SHPRH-205ENST00000433355 FAM135BQ49AJ0 1406 aa4.86□□□□□ -1.63
SHPRH-205ENST00000433355 TRPM1Q7Z4N2 1603 aa4.86□□□□□ -1.63
SHPRH-205ENST00000433355 LRRC7Q96NW7 1537 aa4.86□□□□□ -1.63
SHPRH-205ENST00000433355 YEATS2Q9ULM3 1422 aa4.86□□□□□ -1.63
SHPRH-205ENST00000433355 BCL11BQ9C0K0 894 aaPredicted RBP4.86□□□□□ -1.63
SHPRH-205ENST00000433355 KDM6BO15054 1643 aa4.86□□□□□ -1.63
SHPRH-205ENST00000433355 DIP2AQ14689 1571 aa4.86□□□□□ -1.63
SHPRH-205ENST00000433355 KIF24Q5T7B8 1368 aa4.85□□□□□ -1.63
SHPRH-205ENST00000433355 L3MBTL2Q969R5 705 aa4.85□□□□□ -1.63
SHPRH-205ENST00000433355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.85□□□□□ -1.63
SHPRH-205ENST00000433355 IQGAP1P46940 1657 aa4.85□□□□□ -1.63
SHPRH-205ENST00000433355 DLC1Q96QB1 1528 aa4.85□□□□□ -1.63
SHPRH-205ENST00000433355 NEXMIFQ5QGS0 1516 aa4.85□□□□□ -1.63
SHPRH-205ENST00000433355 E9PCH4 1651 aa4.85□□□□□ -1.63
SHPRH-205ENST00000433355 ZNF777Q9ULD5 760 aaPredicted RBP4.85□□□□□ -1.63
SHPRH-205ENST00000433355 A2MP01023 1474 aa4.85□□□□□ -1.63
SHPRH-205ENST00000433355 CLTCL1P53675 1640 aa4.84□□□□□ -1.63
SHPRH-205ENST00000433355 ANKRD36BQ8N2N9 1353 aa4.84□□□□□ -1.63
SHPRH-205ENST00000433355 E9PSI1 815 aa4.84□□□□□ -1.63
SHPRH-205ENST00000433355 MADDQ8WXG6 1647 aa4.84□□□□□ -1.63
SHPRH-205ENST00000433355 ADGRB3O60242 1522 aa4.84□□□□□ -1.63
SHPRH-205ENST00000433355 BLMP54132 1417 aaPredicted RBP4.84□□□□□ -1.63
SHPRH-205ENST00000433355 NRXN1Q9ULB1 1477 aa4.84□□□□□ -1.63
SHPRH-205ENST00000433355 CCDC136Q96JN2 1154 aa4.84□□□□□ -1.63
SHPRH-205ENST00000433355 RRP7BPQ9NSQ0 103 aa4.84□□□□□ -1.63
SHPRH-205ENST00000433355 CAMSAP1Q5T5Y3 1602 aa4.84□□□□□ -1.64
SHPRH-205ENST00000433355 CASC1Q6TDU7 716 aa4.84□□□□□ -1.64
SHPRH-205ENST00000433355 ANP32BQ92688 251 aaKnown RBP4.84□□□□□ -1.64
SHPRH-205ENST00000433355 ERVK-7P63135 1459 aa4.84□□□□□ -1.64
SHPRH-205ENST00000433355 IL16Q14005 1332 aa4.84□□□□□ -1.64
SHPRH-205ENST00000433355 CANXP27824 592 aaKnown RBP4.83□□□□□ -1.64
SHPRH-205ENST00000433355 PIK3R4Q99570 1358 aa4.83□□□□□ -1.64
SHPRH-205ENST00000433355 TICAM2Q86XR7 235 aa4.83□□□□□ -1.64
SHPRH-205ENST00000433355 KIF7Q2M1P5 1343 aa4.83□□□□□ -1.64
SHPRH-205ENST00000433355 GOLGA6L22H0YM25 854 aa4.83□□□□□ -1.64
SHPRH-205ENST00000433355 NLRP1Q9C000 1473 aa4.82□□□□□ -1.64
SHPRH-205ENST00000433355 MIER1Q8N108 512 aa4.82□□□□□ -1.64
SHPRH-205ENST00000433355 AMER1Q5JTC6 1135 aaPredicted RBP4.82□□□□□ -1.64
SHPRH-205ENST00000433355 MAP3K4Q9Y6R4 1608 aa4.82□□□□□ -1.64
SHPRH-205ENST00000433355 ITSN1Q15811 1721 aa4.82□□□□□ -1.64
SHPRH-205ENST00000433355 DHX8Q14562 1220 aaKnown RBP4.82□□□□□ -1.64
SHPRH-205ENST00000433355 POLR3AO14802 1390 aaPredicted RBP4.82□□□□□ -1.64
SHPRH-205ENST00000433355 A2ML1A8K2U0 1454 aa4.82□□□□□ -1.64
SHPRH-205ENST00000433355 P3H3Q8IVL6 736 aa4.82□□□□□ -1.64
SHPRH-205ENST00000433355 HDGFL2Q7Z4V5 671 aaPredicted RBP4.81□□□□□ -1.64
SHPRH-205ENST00000433355 PPLO60437 1756 aa4.81□□□□□ -1.64
SHPRH-205ENST00000433355 ATP7BP35670 1465 aa4.81□□□□□ -1.64
SHPRH-205ENST00000433355 RTL1A6NKG5 1358 aa4.81□□□□□ -1.64
SHPRH-205ENST00000433355 PDE3AQ14432 1141 aa4.81□□□□□ -1.64
SHPRH-205ENST00000433355 MROH2AA6NES4 1674 aa4.81□□□□□ -1.64
SHPRH-205ENST00000433355 HSPA5P11021 654 aaKnown RBP4.81□□□□□ -1.64
SHPRH-205ENST00000433355 CD109Q6YHK3 1445 aa4.81□□□□□ -1.64
SHPRH-205ENST00000433355 CCDC27Q2M243 656 aa4.81□□□□□ -1.64
SHPRH-205ENST00000433355 CENPQQ7L2Z9 268 aaPredicted RBP4.81□□□□□ -1.64
SHPRH-205ENST00000433355 DDX10Q13206 875 aaKnown RBP4.81□□□□□ -1.64
SHPRH-205ENST00000433355 PPARGC1BQ86YN6 1023 aaKnown RBP4.81□□□□□ -1.64
SHPRH-205ENST00000433355 SIRT1Q96EB6 747 aa4.8□□□□□ -1.64
SHPRH-205ENST00000433355 BCL11AQ9H165 835 aa4.8□□□□□ -1.64
SHPRH-205ENST00000433355 ANKRD26Q9UPS8 1709 aa4.8□□□□□ -1.64
SHPRH-205ENST00000433355 HMMRO75330 724 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms