RNA–Protein interactions for RNA: ENST00000432547.7

TTR-202, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 745 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-202ENST00000432547 NKX2-3Q8TAU0 364 aa12.36□□□□□ -0.43
TTR-202ENST00000432547 PRKD2Q9BZL6 878 aa12.35□□□□□ -0.43
TTR-202ENST00000432547 TSHZ2Q9NRE2 1034 aa12.34□□□□□ -0.43
TTR-202ENST00000432547 GFRA3O60609 400 aa12.31□□□□□ -0.44
TTR-202ENST00000432547 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
TTR-202ENST00000432547 KCNV2Q8TDN2 545 aa12.31□□□□□ -0.44
TTR-202ENST00000432547 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.31□□□□□ -0.44
TTR-202ENST00000432547 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
TTR-202ENST00000432547 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
TTR-202ENST00000432547 CUX2O14529 1486 aa12.29□□□□□ -0.44
TTR-202ENST00000432547 COPS2P61201 443 aa12.29□□□□□ -0.44
TTR-202ENST00000432547 LAPTM4AQ15012 233 aa12.29□□□□□ -0.44
TTR-202ENST00000432547 SLF2Q8IX21 1173 aa12.29□□□□□ -0.44
TTR-202ENST00000432547 ARHGEF1Q92888 912 aaKnown RBP12.29□□□□□ -0.44
TTR-202ENST00000432547 V9GY48 417 aaPredicted RBP12.28□□□□□ -0.44
TTR-202ENST00000432547 ERCC6Q03468 1493 aa12.27□□□□□ -0.44
TTR-202ENST00000432547 PTGDRQ13258 359 aa12.27□□□□□ -0.45
TTR-202ENST00000432547 NESP48681 1621 aa12.26□□□□□ -0.45
TTR-202ENST00000432547 LAMC3Q9Y6N6 1575 aa12.25□□□□□ -0.45
TTR-202ENST00000432547 KIF21AQ7Z4S6 1674 aa12.24□□□□□ -0.45
TTR-202ENST00000432547 NRG2O14511 850 aaPredicted RBP12.23□□□□□ -0.45
TTR-202ENST00000432547 ZPR1O75312 459 aa12.23□□□□□ -0.45
TTR-202ENST00000432547 TRAF7Q6Q0C0 670 aa12.23□□□□□ -0.45
TTR-202ENST00000432547 THOC2Q8NI27 1593 aaKnown RBP12.22□□□□□ -0.45
TTR-202ENST00000432547 NECTIN2Q92692 538 aa12.22□□□□□ -0.45
TTR-202ENST00000432547 ADGRG1Q9Y653 693 aa12.22□□□□□ -0.45
TTR-202ENST00000432547 EMID1Q96A84 441 aaPredicted RBP12.21□□□□□ -0.45
TTR-202ENST00000432547 WIZO95785 1651 aa12.21□□□□□ -0.45
TTR-202ENST00000432547 FAM161AQ3B820 660 aa12.2□□□□□ -0.46
TTR-202ENST00000432547 BLOC1S3Q6QNY0 202 aa12.19□□□□□ -0.46
TTR-202ENST00000432547 TMEM134Q9H6X4 195 aa12.19□□□□□ -0.46
TTR-202ENST00000432547 DNAJB2P25686 324 aa12.18□□□□□ -0.46
TTR-202ENST00000432547 PCDHB3Q9Y5E6 796 aa12.18□□□□□ -0.46
TTR-202ENST00000432547 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
TTR-202ENST00000432547 RCCD1A6NED2 376 aa12.15□□□□□ -0.46
TTR-202ENST00000432547 TLL1O43897 1013 aa12.15□□□□□ -0.46
TTR-202ENST00000432547 RNF223E7ERA6 249 aa12.14□□□□□ -0.47
TTR-202ENST00000432547 TRIM67Q6ZTA4 783 aa12.14□□□□□ -0.47
TTR-202ENST00000432547 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
TTR-202ENST00000432547 PDZRN3Q9UPQ7 1066 aa12.14□□□□□ -0.47
TTR-202ENST00000432547 GGCXP38435 758 aa12.13□□□□□ -0.47
TTR-202ENST00000432547 PRR14Q9BWN1 585 aa12.13□□□□□ -0.47
TTR-202ENST00000432547 NUTM2FA1L443 756 aa12.12□□□□□ -0.47
TTR-202ENST00000432547 SLC10A3P09131 477 aa12.12□□□□□ -0.47
TTR-202ENST00000432547 SLC4A3P48751 1232 aa12.12□□□□□ -0.47
TTR-202ENST00000432547 SEMA3EO15041 775 aa12.11□□□□□ -0.47
TTR-202ENST00000432547 ACTN4O43707 911 aaKnown RBP12.11□□□□□ -0.47
TTR-202ENST00000432547 CFHP08603 1231 aa12.08□□□□□ -0.48
TTR-202ENST00000432547 PDS5BQ9NTI5 1447 aa12.08□□□□□ -0.48
TTR-202ENST00000432547 PRDM2Q13029 1718 aa12.08□□□□□ -0.48
TTR-202ENST00000432547 PPEF1O14829 653 aaPredicted RBP12.07□□□□□ -0.48
TTR-202ENST00000432547 FCHSD2O94868 740 aa12.06□□□□□ -0.48
TTR-202ENST00000432547 SLC19A1P41440 591 aa12.06□□□□□ -0.48
TTR-202ENST00000432547 S1PR4O95977 384 aa12.05□□□□□ -0.48
TTR-202ENST00000432547 PXYLP1Q8TE99 480 aa12.05□□□□□ -0.48
TTR-202ENST00000432547 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
TTR-202ENST00000432547 KMT5BQ4FZB7 885 aa12.04□□□□□ -0.48
TTR-202ENST00000432547 LIAT1Q6ZQX7 453 aa12.04□□□□□ -0.48
TTR-202ENST00000432547 TOP2AP11388 1531 aaKnown RBP12.03□□□□□ -0.48
TTR-202ENST00000432547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.03□□□□□ -0.48
TTR-202ENST00000432547 SPRYD7Q5W111 196 aa12.03□□□□□ -0.48
TTR-202ENST00000432547 ANKLE1Q8NAG6 615 aa12.03□□□□□ -0.48
TTR-202ENST00000432547 WDR62O43379 1518 aa12.02□□□□□ -0.48
TTR-202ENST00000432547 RSF1Q96T23 1441 aaPredicted RBP12.02□□□□□ -0.49
TTR-202ENST00000432547 MRC2Q9UBG0 1479 aa12.01□□□□□ -0.49
TTR-202ENST00000432547 ADH1BP00325 375 aa12□□□□□ -0.49
TTR-202ENST00000432547 FECHP22830 423 aa12□□□□□ -0.49
TTR-202ENST00000432547 PLA2G2CQ5R387 149 aa12□□□□□ -0.49
TTR-202ENST00000432547 P3H3Q8IVL6 736 aa12□□□□□ -0.49
TTR-202ENST00000432547 RBM26Q5T8P6 1007 aaKnown RBP11.99□□□□□ -0.49
TTR-202ENST00000432547 METTL3Q86U44 580 aaKnown RBP11.99□□□□□ -0.49
TTR-202ENST00000432547 ZNF598Q86UK7 904 aaKnown RBP11.99□□□□□ -0.49
TTR-202ENST00000432547 GPR37O15354 613 aa11.98□□□□□ -0.49
TTR-202ENST00000432547 TESPA1A2RU30 521 aaPredicted RBP11.97□□□□□ -0.49
TTR-202ENST00000432547 ZNF787Q6DD87 383 aa11.97□□□□□ -0.49
TTR-202ENST00000432547 CFTRP13569 1480 aa11.96□□□□□ -0.49
TTR-202ENST00000432547 CEP164Q9UPV0 1460 aa11.96□□□□□ -0.49
TTR-202ENST00000432547 OATP04181 439 aa11.96□□□□□ -0.49
TTR-202ENST00000432547 PRR20EP86478 221 aa11.96□□□□□ -0.49
TTR-202ENST00000432547 PRR20CP86479 221 aa11.96□□□□□ -0.49
TTR-202ENST00000432547 PRR20DP86480 221 aa11.96□□□□□ -0.49
TTR-202ENST00000432547 PRR20BP86481 221 aa11.96□□□□□ -0.49
TTR-202ENST00000432547 PRR20AP86496 221 aa11.96□□□□□ -0.49
TTR-202ENST00000432547 HIC1Q14526 733 aa11.96□□□□□ -0.49
TTR-202ENST00000432547 PUS10Q3MIT2 529 aaKnown RBP11.96□□□□□ -0.49
TTR-202ENST00000432547 SCUBE3Q8IX30 993 aa11.96□□□□□ -0.49
TTR-202ENST00000432547 GDF9O60383 454 aa11.95□□□□□ -0.5
TTR-202ENST00000432547 NR1I2O75469 434 aa11.95□□□□□ -0.5
TTR-202ENST00000432547 MYT1Q01538 1121 aa11.94□□□□□ -0.5
TTR-202ENST00000432547 FANCD2Q9BXW9 1451 aa11.94□□□□□ -0.5
TTR-202ENST00000432547 ZNF697Q5TEC3 545 aa11.93□□□□□ -0.5
TTR-202ENST00000432547 SLC6A16Q9GZN6 736 aa11.93□□□□□ -0.5
TTR-202ENST00000432547 NLRP7Q8WX94 980 aa11.91□□□□□ -0.5
TTR-202ENST00000432547 TNFRSF10AO00220 468 aa11.9□□□□□ -0.5
TTR-202ENST00000432547 DGAT1O75907 488 aa11.9□□□□□ -0.5
TTR-202ENST00000432547 ZNF775Q96BV0 537 aaPredicted RBP11.9□□□□□ -0.5
TTR-202ENST00000432547 POTECB2RU33 542 aa11.89□□□□□ -0.51
TTR-202ENST00000432547 GNPATO15228 680 aa11.89□□□□□ -0.51
TTR-202ENST00000432547 PHOX2BQ99453 314 aa11.89□□□□□ -0.51
TTR-202ENST00000432547 PKDCCQ504Y2 493 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms