RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TESK2Q96S53 571 aa26.96■■□□□ 1.91
VRK2-205ENST00000432057 CCDC184Q52MB2 194 aa26.95■■□□□ 1.9
VRK2-205ENST00000432057 ARHGAP31Q2M1Z3 1444 aa26.95■■□□□ 1.9
VRK2-205ENST00000432057 SCAF11Q99590 1463 aaKnown RBP26.94■■□□□ 1.9
VRK2-205ENST00000432057 NRXN1Q9ULB1 1477 aa26.94■■□□□ 1.9
VRK2-205ENST00000432057 MYO5BQ9ULV0 1848 aa26.92■■□□□ 1.9
VRK2-205ENST00000432057 ADGRF5Q8IZF2 1346 aa26.92■■□□□ 1.9
VRK2-205ENST00000432057 CHGAP10645 457 aaKnown RBP26.91■■□□□ 1.9
VRK2-205ENST00000432057 ARHGEF40Q8TER5 1519 aa26.91■■□□□ 1.9
VRK2-205ENST00000432057 AGLP35573 1532 aa26.9■■□□□ 1.9
VRK2-205ENST00000432057 CLTCQ00610 1675 aaKnown RBP26.88■■□□□ 1.89
VRK2-205ENST00000432057 CNGB1Q14028 1251 aaPredicted RBP26.87■■□□□ 1.89
VRK2-205ENST00000432057 MRS2Q9HD23 443 aa26.86■■□□□ 1.89
VRK2-205ENST00000432057 CFAP70Q5T0N1 1121 aa26.85■■□□□ 1.89
VRK2-205ENST00000432057 TMF1P82094 1093 aa26.85■■□□□ 1.89
VRK2-205ENST00000432057 SETBP1Q9Y6X0 1596 aa26.84■■□□□ 1.89
VRK2-205ENST00000432057 NEXMIFQ5QGS0 1516 aa26.84■■□□□ 1.89
VRK2-205ENST00000432057 MYO3AQ8NEV4 1616 aa26.83■■□□□ 1.88
VRK2-205ENST00000432057 EIF3AQ14152 1382 aaKnown RBP26.82■■□□□ 1.88
VRK2-205ENST00000432057 PIK3C2GO75747 1445 aa26.82■■□□□ 1.88
VRK2-205ENST00000432057 KDM5AP29375 1690 aaKnown RBP26.8■■□□□ 1.88
VRK2-205ENST00000432057 MYOM1P52179 1685 aa26.8■■□□□ 1.88
VRK2-205ENST00000432057 TMEM131LA2VDJ0 1609 aa26.79■■□□□ 1.88
VRK2-205ENST00000432057 HNRNPUQ00839 825 aaKnown RBP eCLIP26.79■■□□□ 1.88
VRK2-205ENST00000432057 RPGRIP1LQ68CZ1 1315 aa26.78■■□□□ 1.88
VRK2-205ENST00000432057 ERVK-7P63135 1459 aa26.76■■□□□ 1.87
VRK2-205ENST00000432057 FAM9BQ8IZU0 186 aa26.76■■□□□ 1.87
VRK2-205ENST00000432057 ADGRB1O14514 1584 aa26.75■■□□□ 1.87
VRK2-205ENST00000432057 IDI1Q13907 227 aa26.74■■□□□ 1.87
VRK2-205ENST00000432057 QRICH2Q9H0J4 1663 aa26.73■■□□□ 1.87
VRK2-205ENST00000432057 KTN1Q86UP2 1357 aaKnown RBP26.72■■□□□ 1.87
VRK2-205ENST00000432057 TRHP20396 242 aaPredicted RBP26.71■■□□□ 1.87
VRK2-205ENST00000432057 SLC52A1Q9NWF4 448 aa26.71■■□□□ 1.87
VRK2-205ENST00000432057 PER1O15534 1290 aaPredicted RBP26.7■■□□□ 1.87
VRK2-205ENST00000432057 FBXO31Q5XUX0 539 aaPredicted RBP26.69■■□□□ 1.86
VRK2-205ENST00000432057 C14orf93Q9H972 538 aaKnown RBP26.68■■□□□ 1.86
VRK2-205ENST00000432057 PANK3Q9H999 370 aa26.68■■□□□ 1.86
VRK2-205ENST00000432057 ARHGEF28Q8N1W1 1705 aaKnown RBP26.68■■□□□ 1.86
VRK2-205ENST00000432057 PARD3Q8TEW0 1356 aa26.68■■□□□ 1.86
VRK2-205ENST00000432057 RALBP1Q15311 655 aa26.68■■□□□ 1.86
VRK2-205ENST00000432057 SPATA31D1Q6ZQQ2 1576 aa26.68■■□□□ 1.86
VRK2-205ENST00000432057 MYBBP1AQ9BQG0 1328 aaKnown RBP26.67■■□□□ 1.86
VRK2-205ENST00000432057 NUTM2DQ5VT03 806 aaPredicted RBP26.67■■□□□ 1.86
VRK2-205ENST00000432057 PPP6R1Q9UPN7 881 aa26.67■■□□□ 1.86
VRK2-205ENST00000432057 MLECQ14165 292 aa26.66■■□□□ 1.86
VRK2-205ENST00000432057 CDCA8Q53HL2 280 aa26.66■■□□□ 1.86
VRK2-205ENST00000432057 VGFO15240 615 aaPredicted RBP26.63■■□□□ 1.85
VRK2-205ENST00000432057 ZFYVE9O95405 1425 aa26.62■■□□□ 1.85
VRK2-205ENST00000432057 BRD4O60885 1362 aaPredicted RBP26.62■■□□□ 1.85
VRK2-205ENST00000432057 SBNO2Q9Y2G9 1366 aa26.62■■□□□ 1.85
VRK2-205ENST00000432057 TMEM132EQ6IEE7 984 aa26.6■■□□□ 1.85
VRK2-205ENST00000432057 ASXL1Q8IXJ9 1541 aa26.6■■□□□ 1.85
VRK2-205ENST00000432057 CENPJQ9HC77 1338 aaPredicted RBP26.6■■□□□ 1.85
VRK2-205ENST00000432057 TMC1Q8TDI8 760 aa26.59■■□□□ 1.85
VRK2-205ENST00000432057 TRAK1Q9UPV9 953 aa26.59■■□□□ 1.85
VRK2-205ENST00000432057 CC2D1BQ5T0F9 858 aaKnown RBP26.57■■□□□ 1.84
VRK2-205ENST00000432057 SUPT16HQ9Y5B9 1047 aaKnown RBP26.56■■□□□ 1.84
VRK2-205ENST00000432057 PNISRQ8TF01 805 aaKnown RBP26.55■■□□□ 1.84
VRK2-205ENST00000432057 ZBED9Q6R2W3 1325 aa26.55■■□□□ 1.84
VRK2-205ENST00000432057 SLC24A1O60721 1099 aa26.55■■□□□ 1.84
VRK2-205ENST00000432057 NLRP13Q86W25 1043 aa26.53■■□□□ 1.84
VRK2-205ENST00000432057 A2ML1A8K2U0 1454 aa26.52■■□□□ 1.84
VRK2-205ENST00000432057 LRPPRCP42704 1394 aaKnown RBP26.51■■□□□ 1.83
VRK2-205ENST00000432057 SENP3Q9H4L4 574 aaPredicted RBP26.5■■□□□ 1.83
VRK2-205ENST00000432057 STAG3Q9UJ98 1225 aa26.49■■□□□ 1.83
VRK2-205ENST00000432057 KNSTRNQ9Y448 316 aa26.49■■□□□ 1.83
VRK2-205ENST00000432057 ALKQ9UM73 1620 aa26.49■■□□□ 1.83
VRK2-205ENST00000432057 ESF1Q9H501 851 aaKnown RBP26.48■■□□□ 1.83
VRK2-205ENST00000432057 SETD1AO15047 1707 aaKnown RBP26.48■■□□□ 1.83
VRK2-205ENST00000432057 ZMYM3Q14202 1370 aa26.48■■□□□ 1.83
VRK2-205ENST00000432057 TULP4Q9NRJ4 1543 aa26.46■■□□□ 1.83
VRK2-205ENST00000432057 AMER1Q5JTC6 1135 aaPredicted RBP26.46■■□□□ 1.83
VRK2-205ENST00000432057 RIMS2Q9UQ26 1411 aa26.44■■□□□ 1.82
VRK2-205ENST00000432057 PTPRMP28827 1452 aa26.42■■□□□ 1.82
VRK2-205ENST00000432057 FKBP8Q14318 412 aa26.41■■□□□ 1.82
VRK2-205ENST00000432057 UBR1Q8IWV7 1749 aa26.41■■□□□ 1.82
VRK2-205ENST00000432057 NPC1L1Q9UHC9 1359 aa26.4■■□□□ 1.82
VRK2-205ENST00000432057 NRXN3Q9Y4C0 1643 aa26.4■■□□□ 1.82
VRK2-205ENST00000432057 YTHDC2Q9H6S0 1430 aaKnown RBP26.4■■□□□ 1.82
VRK2-205ENST00000432057 NEFLP07196 543 aa26.39■■□□□ 1.82
VRK2-205ENST00000432057 STK26Q9P289 416 aa26.38■■□□□ 1.81
VRK2-205ENST00000432057 FER1L4A9Z1Z3 1794 aa26.38■■□□□ 1.81
VRK2-205ENST00000432057 TNRQ92752 1358 aa26.37■■□□□ 1.81
VRK2-205ENST00000432057 SENP3-EIF4A1A0A087X0R7 540 aa26.36■■□□□ 1.81
VRK2-205ENST00000432057 CARD14Q9BXL6 1004 aa26.36■■□□□ 1.81
VRK2-205ENST00000432057 C3P01024 1663 aa26.35■■□□□ 1.81
VRK2-205ENST00000432057 PPP2R1AP30153 589 aa26.35■■□□□ 1.81
VRK2-205ENST00000432057 USP32Q8NFA0 1604 aa26.35■■□□□ 1.81
VRK2-205ENST00000432057 EVC2Q86UK5 1308 aa26.34■■□□□ 1.81
VRK2-205ENST00000432057 SAFB2Q14151 953 aaKnown RBP eCLIP26.34■■□□□ 1.81
VRK2-205ENST00000432057 NSD3Q9BZ95 1437 aa26.31■■□□□ 1.8
VRK2-205ENST00000432057 BLMP54132 1417 aaPredicted RBP26.3■■□□□ 1.8
VRK2-205ENST00000432057 SMG6Q86US8 1419 aaKnown RBP26.3■■□□□ 1.8
VRK2-205ENST00000432057 SLC12A5Q9H2X9 1139 aa26.3■■□□□ 1.8
VRK2-205ENST00000432057 BCANQ96GW7 911 aa26.29■■□□□ 1.8
VRK2-205ENST00000432057 DLC1Q96QB1 1528 aa26.28■■□□□ 1.8
VRK2-205ENST00000432057 PUS7Q96PZ0 661 aaKnown RBP26.28■■□□□ 1.8
VRK2-205ENST00000432057 PRAM1Q96QH2 718 aa26.28■■□□□ 1.8
VRK2-205ENST00000432057 INSRP06213 1382 aa26.26■■□□□ 1.79
VRK2-205ENST00000432057 KNDC1Q76NI1 1749 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms