RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 E9PCH4 1651 aa21.91■■□□□ 1.1
SMARCE1-205ENST00000431889 SLC52A1Q9NWF4 448 aa21.89■■□□□ 1.09
SMARCE1-205ENST00000431889 TMEM94Q12767 1356 aa21.89■■□□□ 1.09
SMARCE1-205ENST00000431889 PROSER2Q86WR7 435 aaPredicted RBP21.88■■□□□ 1.09
SMARCE1-205ENST00000431889 PPP1R15AO75807 674 aaPredicted RBP21.87■■□□□ 1.09
SMARCE1-205ENST00000431889 TMEM131LA2VDJ0 1609 aa21.87■■□□□ 1.09
SMARCE1-205ENST00000431889 KCNA6P17658 529 aa21.87■■□□□ 1.09
SMARCE1-205ENST00000431889 RPRD2Q5VT52 1461 aaKnown RBP21.86■■□□□ 1.09
SMARCE1-205ENST00000431889 RIMS2Q9UQ26 1411 aa21.86■■□□□ 1.09
SMARCE1-205ENST00000431889 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
SMARCE1-205ENST00000431889 ZFYVE9O95405 1425 aa21.84■■□□□ 1.09
SMARCE1-205ENST00000431889 NUP155O75694 1391 aa21.84■■□□□ 1.09
SMARCE1-205ENST00000431889 IQGAP3Q86VI3 1631 aa21.82■■□□□ 1.08
SMARCE1-205ENST00000431889 ROCK1Q13464 1354 aa21.82■■□□□ 1.08
SMARCE1-205ENST00000431889 ROBO1Q9Y6N7 1651 aa21.79■■□□□ 1.08
SMARCE1-205ENST00000431889 PLEKHG1Q9ULL1 1385 aa21.78■■□□□ 1.08
SMARCE1-205ENST00000431889 NWD1Q149M9 1564 aa21.78■■□□□ 1.08
SMARCE1-205ENST00000431889 CHD2O14647 1828 aaKnown RBP21.78■■□□□ 1.08
SMARCE1-205ENST00000431889 NKTRP30414 1462 aaKnown RBP21.73■■□□□ 1.07
SMARCE1-205ENST00000431889 MSH6P52701 1360 aa21.72■■□□□ 1.07
SMARCE1-205ENST00000431889 FAM135BQ49AJ0 1406 aa21.72■■□□□ 1.07
SMARCE1-205ENST00000431889 C14orf37Q86TY3 774 aa21.72■■□□□ 1.07
SMARCE1-205ENST00000431889 ADAMTS13Q76LX8 1427 aa21.71■■□□□ 1.07
SMARCE1-205ENST00000431889 HDGFP51858 240 aaKnown RBP21.71■■□□□ 1.07
SMARCE1-205ENST00000431889 RGS17Q9UGC6 210 aaPredicted RBP21.7■■□□□ 1.06
SMARCE1-205ENST00000431889 SPHKAPQ2M3C7 1700 aa21.7■■□□□ 1.06
SMARCE1-205ENST00000431889 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.7■■□□□ 1.06
SMARCE1-205ENST00000431889 ZNF326Q5BKZ1 582 aaKnown RBP21.69■■□□□ 1.06
SMARCE1-205ENST00000431889 SLAIN2Q9P270 581 aa21.69■■□□□ 1.06
SMARCE1-205ENST00000431889 TBX22Q9Y458 520 aa21.69■■□□□ 1.06
SMARCE1-205ENST00000431889 PHLPP1O60346 1717 aa21.67■■□□□ 1.06
SMARCE1-205ENST00000431889 PTPRUQ92729 1446 aa21.66■■□□□ 1.06
SMARCE1-205ENST00000431889 AMOTL2Q9Y2J4 779 aa21.64■■□□□ 1.05
SMARCE1-205ENST00000431889 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.64■■□□□ 1.05
SMARCE1-205ENST00000431889 CLTCL1P53675 1640 aa21.63■■□□□ 1.05
SMARCE1-205ENST00000431889 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
SMARCE1-205ENST00000431889 NRXN3Q9Y4C0 1643 aa21.62■■□□□ 1.05
SMARCE1-205ENST00000431889 TRIM52Q96A61 297 aa21.61■■□□□ 1.05
SMARCE1-205ENST00000431889 NAIPQ13075 1403 aa21.61■■□□□ 1.05
SMARCE1-205ENST00000431889 DIP2AQ14689 1571 aa21.61■■□□□ 1.05
SMARCE1-205ENST00000431889 TRPM2O94759 1503 aa21.6■■□□□ 1.05
SMARCE1-205ENST00000431889 POTEAQ6S8J7 498 aa21.59■■□□□ 1.05
SMARCE1-205ENST00000431889 ATF3P18847 181 aa21.57■■□□□ 1.04
SMARCE1-205ENST00000431889 METP08581 1390 aa21.57■■□□□ 1.04
SMARCE1-205ENST00000431889 COL16A1Q07092 1604 aaPredicted RBP21.55■■□□□ 1.04
SMARCE1-205ENST00000431889 FOXD1Q16676 465 aa21.55■■□□□ 1.04
SMARCE1-205ENST00000431889 C19orf44Q9H6X5 657 aa21.55■■□□□ 1.04
SMARCE1-205ENST00000431889 KIF1BO60333 1816 aa21.55■■□□□ 1.04
SMARCE1-205ENST00000431889 NEXMIFQ5QGS0 1516 aa21.54■■□□□ 1.04
SMARCE1-205ENST00000431889 SETBP1Q9Y6X0 1596 aa21.53■■□□□ 1.04
SMARCE1-205ENST00000431889 PIK3R4Q99570 1358 aa21.53■■□□□ 1.04
SMARCE1-205ENST00000431889 XRN1Q8IZH2 1706 aaKnown RBP21.53■■□□□ 1.04
SMARCE1-205ENST00000431889 CADPS2Q86UW7 1296 aa21.53■■□□□ 1.04
SMARCE1-205ENST00000431889 JCADQ9P266 1359 aa21.51■■□□□ 1.03
SMARCE1-205ENST00000431889 DDX17Q92841 729 aaKnown RBP21.5■■□□□ 1.03
SMARCE1-205ENST00000431889 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
SMARCE1-205ENST00000431889 NCOA3Q9Y6Q9 1424 aa21.5■■□□□ 1.03
SMARCE1-205ENST00000431889 BRINP3Q76B58 766 aa21.49■■□□□ 1.03
SMARCE1-205ENST00000431889 LRP6O75581 1613 aa21.49■■□□□ 1.03
SMARCE1-205ENST00000431889 SETD1AO15047 1707 aaKnown RBP21.48■■□□□ 1.03
SMARCE1-205ENST00000431889 HFM1A2PYH4 1435 aa21.48■■□□□ 1.03
SMARCE1-205ENST00000431889 NUTM2BA6NNL0 878 aaPredicted RBP21.46■■□□□ 1.03
SMARCE1-205ENST00000431889 NUTM2EB1AL46 878 aaPredicted RBP21.46■■□□□ 1.03
SMARCE1-205ENST00000431889 MEX3CQ5U5Q3 659 aaKnown RBP21.46■■□□□ 1.03
SMARCE1-205ENST00000431889 NUTM2AQ8IVF1 878 aaPredicted RBP21.46■■□□□ 1.03
SMARCE1-205ENST00000431889 NALCNQ8IZF0 1738 aa21.46■■□□□ 1.03
SMARCE1-205ENST00000431889 AHDC1Q5TGY3 1603 aaPredicted RBP21.44■■□□□ 1.02
SMARCE1-205ENST00000431889 ASXL1Q8IXJ9 1541 aa21.43■■□□□ 1.02
SMARCE1-205ENST00000431889 MST1RQ04912 1400 aa21.43■■□□□ 1.02
SMARCE1-205ENST00000431889 SHPRHQ149N8 1683 aa21.4■■□□□ 1.02
SMARCE1-205ENST00000431889 PPLO60437 1756 aa21.39■■□□□ 1.02
SMARCE1-205ENST00000431889 RGL3Q3MIN7 710 aa21.39■■□□□ 1.01
SMARCE1-205ENST00000431889 ADGRL3Q9HAR2 1447 aa21.38■■□□□ 1.01
SMARCE1-205ENST00000431889 ROBO2Q9HCK4 1378 aa21.38■■□□□ 1.01
SMARCE1-205ENST00000431889 VGFO15240 615 aaPredicted RBP21.37■■□□□ 1.01
SMARCE1-205ENST00000431889 SPATA31A6Q5VVP1 1343 aa21.37■■□□□ 1.01
SMARCE1-205ENST00000431889 DCCP43146 1447 aa21.37■■□□□ 1.01
SMARCE1-205ENST00000431889 NHSL1Q5SYE7 1610 aa21.37■■□□□ 1.01
SMARCE1-205ENST00000431889 ORAI2Q96SN7 254 aa21.34■■□□□ 1.01
SMARCE1-205ENST00000431889 ADGRF5Q8IZF2 1346 aa21.34■■□□□ 1.01
SMARCE1-205ENST00000431889 STK26Q9P289 416 aa21.33■■□□□ 1.01
SMARCE1-205ENST00000431889 MPHOSPH9Q99550 1183 aa21.32■■□□□ 1
SMARCE1-205ENST00000431889 C1orf167Q5SNV9 1468 aa21.31■■□□□ 1
SMARCE1-205ENST00000431889 CCDC144AA2RUR9 1427 aa21.29■■□□□ 1
SMARCE1-205ENST00000431889 NUTM2FA1L443 756 aa21.29■■□□□ 1
SMARCE1-205ENST00000431889 RPGRIP1LQ68CZ1 1315 aa21.29■■□□□ 1
SMARCE1-205ENST00000431889 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
SMARCE1-205ENST00000431889 TMEM132EQ6IEE7 984 aa21.28■■□□□ 1
SMARCE1-205ENST00000431889 C8orf37Q96NL8 207 aa21.28■■□□□ 1
SMARCE1-205ENST00000431889 PTCH1Q13635 1447 aa21.28■■□□□ 1
SMARCE1-205ENST00000431889 ADAMTS2O95450 1211 aa21.27■■□□□ 1
SMARCE1-205ENST00000431889 ZNF772Q68DY9 489 aaPredicted RBP21.27■■□□□ 1
SMARCE1-205ENST00000431889 WAPLQ7Z5K2 1190 aa21.27■■□□□ 1
SMARCE1-205ENST00000431889 LRRC59Q96AG4 307 aaKnown RBP21.27■■□□□ 1
SMARCE1-205ENST00000431889 AFF2P51816 1311 aa21.27■■□□□ 1
SMARCE1-205ENST00000431889 PNPLA6Q8IY17 1366 aa21.27■□□□□ 0.99
SMARCE1-205ENST00000431889 IFT172Q9UG01 1749 aa21.25■□□□□ 0.99
SMARCE1-205ENST00000431889 XPCQ01831 940 aaPredicted RBP21.24■□□□□ 0.99
SMARCE1-205ENST00000431889 SPATA31E1Q6ZUB1 1445 aa21.24■□□□□ 0.99
SMARCE1-205ENST00000431889 RXRBP28702 533 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms