RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 STAG3Q9UJ98 1225 aa21.16■□□□□ 0.98
CSTF3-202ENST00000431742 RIMS2Q9UQ26 1411 aa21.13■□□□□ 0.97
CSTF3-202ENST00000431742 NCKAP5LQ9HCH0 1330 aa21.11■□□□□ 0.97
CSTF3-202ENST00000431742 CHGAP10645 457 aaKnown RBP21.11■□□□□ 0.97
CSTF3-202ENST00000431742 ANKLE2Q86XL3 938 aa21.1■□□□□ 0.97
CSTF3-202ENST00000431742 LTKP29376 864 aa21.09■□□□□ 0.97
CSTF3-202ENST00000431742 NPHP4O75161 1426 aaPredicted RBP21.08■□□□□ 0.97
CSTF3-202ENST00000431742 NRXN3Q9Y4C0 1643 aa21.07■□□□□ 0.96
CSTF3-202ENST00000431742 TXNDC2Q86VQ3 553 aa21.06■□□□□ 0.96
CSTF3-202ENST00000431742 EID1Q9Y6B2 187 aa21.05■□□□□ 0.96
CSTF3-202ENST00000431742 SETBP1Q9Y6X0 1596 aa21.05■□□□□ 0.96
CSTF3-202ENST00000431742 PLEKHG1Q9ULL1 1385 aa21.04■□□□□ 0.96
CSTF3-202ENST00000431742 RPGRIP1LQ68CZ1 1315 aa21.04■□□□□ 0.96
CSTF3-202ENST00000431742 ZNF326Q5BKZ1 582 aaKnown RBP21.03■□□□□ 0.96
CSTF3-202ENST00000431742 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
CSTF3-202ENST00000431742 DMRT2Q9Y5R5 561 aa21.03■□□□□ 0.96
CSTF3-202ENST00000431742 SETD1AO15047 1707 aaKnown RBP21.03■□□□□ 0.96
CSTF3-202ENST00000431742 DIP2AQ14689 1571 aa21.02■□□□□ 0.96
CSTF3-202ENST00000431742 MYOM2P54296 1465 aa21.01■□□□□ 0.95
CSTF3-202ENST00000431742 HDGFP51858 240 aaKnown RBP21.01■□□□□ 0.95
CSTF3-202ENST00000431742 NRXN1Q9ULB1 1477 aa20.99■□□□□ 0.95
CSTF3-202ENST00000431742 STRCP1A6NGW2 1772 aa20.98■□□□□ 0.95
CSTF3-202ENST00000431742 ADAMTS13Q76LX8 1427 aa20.98■□□□□ 0.95
CSTF3-202ENST00000431742 PPP1R15AO75807 674 aaPredicted RBP20.97■□□□□ 0.95
CSTF3-202ENST00000431742 RGL3Q3MIN7 710 aa20.97■□□□□ 0.95
CSTF3-202ENST00000431742 NUTM2DQ5VT03 806 aaPredicted RBP20.97■□□□□ 0.95
CSTF3-202ENST00000431742 CHD2O14647 1828 aaKnown RBP20.97■□□□□ 0.95
CSTF3-202ENST00000431742 SIN3AQ96ST3 1273 aa20.95■□□□□ 0.94
CSTF3-202ENST00000431742 LAMC1P11047 1609 aa20.95■□□□□ 0.94
CSTF3-202ENST00000431742 NWD1Q149M9 1564 aa20.94■□□□□ 0.94
CSTF3-202ENST00000431742 VGFO15240 615 aaPredicted RBP20.94■□□□□ 0.94
CSTF3-202ENST00000431742 CLSPNQ9HAW4 1339 aa20.94■□□□□ 0.94
CSTF3-202ENST00000431742 PIK3C2GO75747 1445 aa20.94■□□□□ 0.94
CSTF3-202ENST00000431742 LTBP4Q8N2S1 1624 aa20.93■□□□□ 0.94
CSTF3-202ENST00000431742 ALKQ9UM73 1620 aa20.93■□□□□ 0.94
CSTF3-202ENST00000431742 ADGRF5Q8IZF2 1346 aa20.91■□□□□ 0.94
CSTF3-202ENST00000431742 XRN1Q8IZH2 1706 aaKnown RBP20.9■□□□□ 0.94
CSTF3-202ENST00000431742 SLC26A8Q96RN1 970 aa20.89■□□□□ 0.93
CSTF3-202ENST00000431742 KIAA1210Q9ULL0 1709 aa20.89■□□□□ 0.93
CSTF3-202ENST00000431742 TBX22Q9Y458 520 aa20.88■□□□□ 0.93
CSTF3-202ENST00000431742 ASXL1Q8IXJ9 1541 aa20.88■□□□□ 0.93
CSTF3-202ENST00000431742 NEUROD1Q13562 356 aa20.87■□□□□ 0.93
CSTF3-202ENST00000431742 STAC3Q96MF2 364 aa20.87■□□□□ 0.93
CSTF3-202ENST00000431742 PIK3R4Q99570 1358 aa20.86■□□□□ 0.93
CSTF3-202ENST00000431742 ZNF335Q9H4Z2 1342 aaPredicted RBP20.86■□□□□ 0.93
CSTF3-202ENST00000431742 CPS1P31327 1500 aa20.86■□□□□ 0.93
CSTF3-202ENST00000431742 XIRP1Q702N8 1843 aaKnown RBP20.85■□□□□ 0.93
CSTF3-202ENST00000431742 DCAF11Q8TEB1 546 aa20.85■□□□□ 0.93
CSTF3-202ENST00000431742 BCANQ96GW7 911 aa20.85■□□□□ 0.93
CSTF3-202ENST00000431742 KNDC1Q76NI1 1749 aa20.84■□□□□ 0.93
CSTF3-202ENST00000431742 L3MBTL2Q969R5 705 aa20.84■□□□□ 0.93
CSTF3-202ENST00000431742 NKTRP30414 1462 aaKnown RBP20.83■□□□□ 0.93
CSTF3-202ENST00000431742 CCER1Q8TC90 406 aaPredicted RBP20.83■□□□□ 0.93
CSTF3-202ENST00000431742 PRAG1Q86YV5 1406 aa20.83■□□□□ 0.93
CSTF3-202ENST00000431742 METP08581 1390 aa20.83■□□□□ 0.92
CSTF3-202ENST00000431742 PTPRUQ92729 1446 aa20.82■□□□□ 0.92
CSTF3-202ENST00000431742 TRPM1Q7Z4N2 1603 aa20.82■□□□□ 0.92
CSTF3-202ENST00000431742 ADGRB1O14514 1584 aa20.81■□□□□ 0.92
CSTF3-202ENST00000431742 KDM2AQ9Y2K7 1162 aa20.8■□□□□ 0.92
CSTF3-202ENST00000431742 TONSLQ96HA7 1378 aa20.8■□□□□ 0.92
CSTF3-202ENST00000431742 C14orf93Q9H972 538 aaKnown RBP20.79■□□□□ 0.92
CSTF3-202ENST00000431742 LRRC7Q96NW7 1537 aa20.78■□□□□ 0.92
CSTF3-202ENST00000431742 KCNA6P17658 529 aa20.78■□□□□ 0.92
CSTF3-202ENST00000431742 IQSEC2Q5JU85 1478 aa20.76■□□□□ 0.91
CSTF3-202ENST00000431742 CFAP70Q5T0N1 1121 aa20.75■□□□□ 0.91
CSTF3-202ENST00000431742 TECPR2O15040 1411 aa20.75■□□□□ 0.91
CSTF3-202ENST00000431742 PTCH1Q13635 1447 aa20.74■□□□□ 0.91
CSTF3-202ENST00000431742 ARHGEF28Q8N1W1 1705 aaKnown RBP20.73■□□□□ 0.91
CSTF3-202ENST00000431742 LRPPRCP42704 1394 aaKnown RBP20.72■□□□□ 0.91
CSTF3-202ENST00000431742 YTHDC2Q9H6S0 1430 aaKnown RBP20.72■□□□□ 0.91
CSTF3-202ENST00000431742 TIMELESSQ9UNS1 1208 aa20.71■□□□□ 0.91
CSTF3-202ENST00000431742 AMOTL2Q9Y2J4 779 aa20.71■□□□□ 0.91
CSTF3-202ENST00000431742 NALCNQ8IZF0 1738 aa20.7■□□□□ 0.9
CSTF3-202ENST00000431742 DLC1Q96QB1 1528 aa20.7■□□□□ 0.9
CSTF3-202ENST00000431742 TMEM132EQ6IEE7 984 aa20.69■□□□□ 0.9
CSTF3-202ENST00000431742 ABCC11Q96J66 1382 aa20.69■□□□□ 0.9
CSTF3-202ENST00000431742 RALGAPBQ86X10 1494 aa20.69■□□□□ 0.9
CSTF3-202ENST00000431742 CERKQ8TCT0 537 aa20.68■□□□□ 0.9
CSTF3-202ENST00000431742 NBPF8Q3BBV2 869 aa20.67■□□□□ 0.9
CSTF3-202ENST00000431742 TMEM94Q12767 1356 aa20.67■□□□□ 0.9
CSTF3-202ENST00000431742 ROBO2Q9HCK4 1378 aa20.67■□□□□ 0.9
CSTF3-202ENST00000431742 NCOA3Q9Y6Q9 1424 aa20.67■□□□□ 0.9
CSTF3-202ENST00000431742 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.65■□□□□ 0.9
CSTF3-202ENST00000431742 FAM135BQ49AJ0 1406 aa20.64■□□□□ 0.89
CSTF3-202ENST00000431742 GPRASP1Q5JY77 1395 aa20.64■□□□□ 0.89
CSTF3-202ENST00000431742 PROSER2Q86WR7 435 aaPredicted RBP20.64■□□□□ 0.89
CSTF3-202ENST00000431742 NBPF1Q3BBV0 1214 aa20.63■□□□□ 0.89
CSTF3-202ENST00000431742 ADGRL3Q9HAR2 1447 aa20.61■□□□□ 0.89
CSTF3-202ENST00000431742 STK26Q9P289 416 aa20.61■□□□□ 0.89
CSTF3-202ENST00000431742 SIRT1Q96EB6 747 aa20.6■□□□□ 0.89
CSTF3-202ENST00000431742 ROCK2O75116 1388 aaKnown RBP20.59■□□□□ 0.89
CSTF3-202ENST00000431742 RBM33Q96EV2 1170 aaKnown RBP20.59■□□□□ 0.89
CSTF3-202ENST00000431742 ADGRB2O60241 1585 aa20.59■□□□□ 0.89
CSTF3-202ENST00000431742 CDC42BPGQ6DT37 1551 aa20.59■□□□□ 0.89
CSTF3-202ENST00000431742 PLEKHH1Q9ULM0 1364 aa20.58■□□□□ 0.88
CSTF3-202ENST00000431742 QRICH2Q9H0J4 1663 aa20.58■□□□□ 0.88
CSTF3-202ENST00000431742 DCCP43146 1447 aa20.57■□□□□ 0.88
CSTF3-202ENST00000431742 MSH6P52701 1360 aa20.56■□□□□ 0.88
CSTF3-202ENST00000431742 FMN2Q9NZ56 1722 aa20.55■□□□□ 0.88
CSTF3-202ENST00000431742 WAPLQ7Z5K2 1190 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms