RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.87■■□□□ 1.25
TSPAN9-203ENST00000431374 SPHKAPQ2M3C7 1700 aa22.87■■□□□ 1.25
TSPAN9-203ENST00000431374 SLC26A8Q96RN1 970 aa22.86■■□□□ 1.25
TSPAN9-203ENST00000431374 BCANQ96GW7 911 aa22.83■■□□□ 1.25
TSPAN9-203ENST00000431374 ACIN1Q9UKV3 1341 aaKnown RBP22.82■■□□□ 1.24
TSPAN9-203ENST00000431374 LRRC7Q96NW7 1537 aa22.82■■□□□ 1.24
TSPAN9-203ENST00000431374 UBAP1LF5GYI3 381 aa22.82■■□□□ 1.24
TSPAN9-203ENST00000431374 NUTM2DQ5VT03 806 aaPredicted RBP22.82■■□□□ 1.24
TSPAN9-203ENST00000431374 MPHOSPH9Q99550 1183 aa22.82■■□□□ 1.24
TSPAN9-203ENST00000431374 CLTCL1P53675 1640 aa22.82■■□□□ 1.24
TSPAN9-203ENST00000431374 RAB3GAP2Q9H2M9 1393 aa22.81■■□□□ 1.24
TSPAN9-203ENST00000431374 MYO5BQ9ULV0 1848 aa22.81■■□□□ 1.24
TSPAN9-203ENST00000431374 FOXD1Q16676 465 aa22.81■■□□□ 1.24
TSPAN9-203ENST00000431374 SENP3Q9H4L4 574 aaPredicted RBP22.8■■□□□ 1.24
TSPAN9-203ENST00000431374 STRCP1A6NGW2 1772 aa22.79■■□□□ 1.24
TSPAN9-203ENST00000431374 KCNA6P17658 529 aa22.79■■□□□ 1.24
TSPAN9-203ENST00000431374 ZNF326Q5BKZ1 582 aaKnown RBP22.78■■□□□ 1.24
TSPAN9-203ENST00000431374 ADAMTS13Q76LX8 1427 aa22.77■■□□□ 1.24
TSPAN9-203ENST00000431374 TBX22Q9Y458 520 aa22.77■■□□□ 1.24
TSPAN9-203ENST00000431374 TOM1O60784 492 aa22.73■■□□□ 1.23
TSPAN9-203ENST00000431374 NWD1Q149M9 1564 aa22.72■■□□□ 1.23
TSPAN9-203ENST00000431374 NEXMIFQ5QGS0 1516 aa22.72■■□□□ 1.23
TSPAN9-203ENST00000431374 CCDC144AA2RUR9 1427 aa22.71■■□□□ 1.23
TSPAN9-203ENST00000431374 NKTRP30414 1462 aaKnown RBP22.71■■□□□ 1.23
TSPAN9-203ENST00000431374 DIP2AQ14689 1571 aa22.71■■□□□ 1.23
TSPAN9-203ENST00000431374 TMEM94Q12767 1356 aa22.7■■□□□ 1.22
TSPAN9-203ENST00000431374 PIK3R4Q99570 1358 aa22.69■■□□□ 1.22
TSPAN9-203ENST00000431374 HRCP23327 699 aa22.69■■□□□ 1.22
TSPAN9-203ENST00000431374 SETBP1Q9Y6X0 1596 aa22.68■■□□□ 1.22
TSPAN9-203ENST00000431374 RPGRIP1LQ68CZ1 1315 aa22.68■■□□□ 1.22
TSPAN9-203ENST00000431374 PROSER2Q86WR7 435 aaPredicted RBP22.68■■□□□ 1.22
TSPAN9-203ENST00000431374 ALKQ9UM73 1620 aa22.68■■□□□ 1.22
TSPAN9-203ENST00000431374 PIP4K2BP78356 416 aa22.67■■□□□ 1.22
TSPAN9-203ENST00000431374 SPATA31E1Q6ZUB1 1445 aa22.65■■□□□ 1.22
TSPAN9-203ENST00000431374 NRXN3Q9Y4C0 1643 aa22.64■■□□□ 1.22
TSPAN9-203ENST00000431374 SCAF1Q9H7N4 1312 aaKnown RBP22.64■■□□□ 1.22
TSPAN9-203ENST00000431374 RBM33Q96EV2 1170 aaKnown RBP22.64■■□□□ 1.21
TSPAN9-203ENST00000431374 KIF1BO60333 1816 aa22.64■■□□□ 1.21
TSPAN9-203ENST00000431374 VGFO15240 615 aaPredicted RBP22.63■■□□□ 1.21
TSPAN9-203ENST00000431374 PTPRUQ92729 1446 aa22.63■■□□□ 1.21
TSPAN9-203ENST00000431374 METP08581 1390 aa22.61■■□□□ 1.21
TSPAN9-203ENST00000431374 AMOTL2Q9Y2J4 779 aa22.6■■□□□ 1.21
TSPAN9-203ENST00000431374 CHD2O14647 1828 aaKnown RBP22.59■■□□□ 1.21
TSPAN9-203ENST00000431374 RGL3Q3MIN7 710 aa22.58■■□□□ 1.21
TSPAN9-203ENST00000431374 XIRP1Q702N8 1843 aaKnown RBP22.58■■□□□ 1.21
TSPAN9-203ENST00000431374 ANKRD30BQ9BXX2 1392 aa22.57■■□□□ 1.2
TSPAN9-203ENST00000431374 NCOA3Q9Y6Q9 1424 aa22.57■■□□□ 1.2
TSPAN9-203ENST00000431374 MSH6P52701 1360 aa22.56■■□□□ 1.2
TSPAN9-203ENST00000431374 HSPA1LP34931 641 aa22.56■■□□□ 1.2
TSPAN9-203ENST00000431374 ADGRF5Q8IZF2 1346 aa22.54■■□□□ 1.2
TSPAN9-203ENST00000431374 XRN1Q8IZH2 1706 aaKnown RBP22.52■■□□□ 1.2
TSPAN9-203ENST00000431374 PPLO60437 1756 aa22.51■■□□□ 1.19
TSPAN9-203ENST00000431374 C14orf37Q86TY3 774 aa22.5■■□□□ 1.19
TSPAN9-203ENST00000431374 FAM135BQ49AJ0 1406 aa22.49■■□□□ 1.19
TSPAN9-203ENST00000431374 C19orf44Q9H6X5 657 aa22.48■■□□□ 1.19
TSPAN9-203ENST00000431374 PIK3C2GO75747 1445 aa22.47■■□□□ 1.19
TSPAN9-203ENST00000431374 SLAIN2Q9P270 581 aa22.46■■□□□ 1.19
TSPAN9-203ENST00000431374 PTCH1Q13635 1447 aa22.46■■□□□ 1.19
TSPAN9-203ENST00000431374 PRAG1Q86YV5 1406 aa22.46■■□□□ 1.19
TSPAN9-203ENST00000431374 SETD1AO15047 1707 aaKnown RBP22.45■■□□□ 1.19
TSPAN9-203ENST00000431374 CADPS2Q86UW7 1296 aa22.44■■□□□ 1.18
TSPAN9-203ENST00000431374 ROBO2Q9HCK4 1378 aa22.44■■□□□ 1.18
TSPAN9-203ENST00000431374 IFT172Q9UG01 1749 aa22.44■■□□□ 1.18
TSPAN9-203ENST00000431374 MYOM2P54296 1465 aa22.43■■□□□ 1.18
TSPAN9-203ENST00000431374 NRXN1Q9ULB1 1477 aa22.43■■□□□ 1.18
TSPAN9-203ENST00000431374 ATF3P18847 181 aa22.43■■□□□ 1.18
TSPAN9-203ENST00000431374 DCCP43146 1447 aa22.41■■□□□ 1.18
TSPAN9-203ENST00000431374 ADGRL3Q9HAR2 1447 aa22.4■■□□□ 1.18
TSPAN9-203ENST00000431374 ASXL1Q8IXJ9 1541 aa22.38■■□□□ 1.17
TSPAN9-203ENST00000431374 C14orf93Q9H972 538 aaKnown RBP22.38■■□□□ 1.17
TSPAN9-203ENST00000431374 LRPPRCP42704 1394 aaKnown RBP22.38■■□□□ 1.17
TSPAN9-203ENST00000431374 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.37■■□□□ 1.17
TSPAN9-203ENST00000431374 ROBO1Q9Y6N7 1651 aa22.37■■□□□ 1.17
TSPAN9-203ENST00000431374 TMEM132EQ6IEE7 984 aa22.36■■□□□ 1.17
TSPAN9-203ENST00000431374 TECPR2O15040 1411 aa22.36■■□□□ 1.17
TSPAN9-203ENST00000431374 DISP3Q9P2K9 1392 aa22.36■■□□□ 1.17
TSPAN9-203ENST00000431374 CFAP70Q5T0N1 1121 aa22.35■■□□□ 1.17
TSPAN9-203ENST00000431374 DHX57Q6P158 1386 aaKnown RBP22.35■■□□□ 1.17
TSPAN9-203ENST00000431374 ABCC11Q96J66 1382 aa22.35■■□□□ 1.17
TSPAN9-203ENST00000431374 STK26Q9P289 416 aa22.34■■□□□ 1.17
TSPAN9-203ENST00000431374 MST1RQ04912 1400 aa22.33■■□□□ 1.17
TSPAN9-203ENST00000431374 DCAF11Q8TEB1 546 aa22.33■■□□□ 1.17
TSPAN9-203ENST00000431374 YTHDC2Q9H6S0 1430 aaKnown RBP22.32■■□□□ 1.16
TSPAN9-203ENST00000431374 TRIM26Q12899 539 aaPredicted RBP22.32■■□□□ 1.16
TSPAN9-203ENST00000431374 STAC3Q96MF2 364 aa22.32■■□□□ 1.16
TSPAN9-203ENST00000431374 KDM2AQ9Y2K7 1162 aa22.31■■□□□ 1.16
TSPAN9-203ENST00000431374 BRINP3Q76B58 766 aa22.3■■□□□ 1.16
TSPAN9-203ENST00000431374 NALCNQ8IZF0 1738 aa22.29■■□□□ 1.16
TSPAN9-203ENST00000431374 WAPLQ7Z5K2 1190 aa22.28■■□□□ 1.16
TSPAN9-203ENST00000431374 PLEKHH1Q9ULM0 1364 aa22.27■■□□□ 1.16
TSPAN9-203ENST00000431374 LAMC1P11047 1609 aa22.27■■□□□ 1.16
TSPAN9-203ENST00000431374 MED1Q15648 1581 aaPredicted RBP22.26■■□□□ 1.15
TSPAN9-203ENST00000431374 SIRT1Q96EB6 747 aa22.26■■□□□ 1.15
TSPAN9-203ENST00000431374 C1orf167Q5SNV9 1468 aa22.25■■□□□ 1.15
TSPAN9-203ENST00000431374 AHDC1Q5TGY3 1603 aaPredicted RBP22.24■■□□□ 1.15
TSPAN9-203ENST00000431374 KNDC1Q76NI1 1749 aa22.24■■□□□ 1.15
TSPAN9-203ENST00000431374 ADGRB1O14514 1584 aa22.24■■□□□ 1.15
TSPAN9-203ENST00000431374 CDC42BPGQ6DT37 1551 aa22.21■■□□□ 1.15
TSPAN9-203ENST00000431374 COL16A1Q07092 1604 aaPredicted RBP22.21■■□□□ 1.15
TSPAN9-203ENST00000431374 JCADQ9P266 1359 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms