RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 MSH6P52701 1360 aa34.58■■■■□ 3.13
PTPRA-207ENST00000431048 SLAIN2Q9P270 581 aa34.57■■■■□ 3.12
PTPRA-207ENST00000431048 RPRD2Q5VT52 1461 aaKnown RBP34.53■■■■□ 3.12
PTPRA-207ENST00000431048 BCANQ96GW7 911 aa34.53■■■■□ 3.12
PTPRA-207ENST00000431048 HDGFP51858 240 aaKnown RBP34.52■■■■□ 3.12
PTPRA-207ENST00000431048 ADGRL2O95490 1459 aa34.52■■■■□ 3.12
PTPRA-207ENST00000431048 PLEKHG1Q9ULL1 1385 aa34.51■■■■□ 3.12
PTPRA-207ENST00000431048 ZFYVE9O95405 1425 aa34.51■■■■□ 3.12
PTPRA-207ENST00000431048 JCADQ9P266 1359 aa34.5■■■■□ 3.11
PTPRA-207ENST00000431048 NCOA3Q9Y6Q9 1424 aa34.47■■■■□ 3.11
PTPRA-207ENST00000431048 TBX22Q9Y458 520 aa34.47■■■■□ 3.11
PTPRA-207ENST00000431048 RIMS2Q9UQ26 1411 aa34.44■■■■□ 3.1
PTPRA-207ENST00000431048 CHD2O14647 1828 aaKnown RBP34.44■■■■□ 3.1
PTPRA-207ENST00000431048 ANKRD50Q9ULJ7 1429 aa34.43■■■■□ 3.1
PTPRA-207ENST00000431048 PHLPP1O60346 1717 aa34.42■■■■□ 3.1
PTPRA-207ENST00000431048 PPP1R15AO75807 674 aaPredicted RBP34.41■■■■□ 3.1
PTPRA-207ENST00000431048 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.4■■■■□ 3.1
PTPRA-207ENST00000431048 TMEM131LA2VDJ0 1609 aa34.37■■■■□ 3.09
PTPRA-207ENST00000431048 SPATA31A6Q5VVP1 1343 aa34.34■■■■□ 3.09
PTPRA-207ENST00000431048 COL16A1Q07092 1604 aaPredicted RBP34.33■■■■□ 3.09
PTPRA-207ENST00000431048 MYO5BQ9ULV0 1848 aa34.32■■■■□ 3.09
PTPRA-207ENST00000431048 CADPS2Q86UW7 1296 aa34.32■■■■□ 3.08
PTPRA-207ENST00000431048 C19orf44Q9H6X5 657 aa34.32■■■■□ 3.08
PTPRA-207ENST00000431048 PIK3R4Q99570 1358 aa34.32■■■■□ 3.08
PTPRA-207ENST00000431048 FAM50AQ14320 339 aaKnown RBP34.31■■■■□ 3.08
PTPRA-207ENST00000431048 GCC2Q8IWJ2 1684 aa34.31■■■■□ 3.08
PTPRA-207ENST00000431048 ADAMTS13Q76LX8 1427 aa34.3■■■■□ 3.08
PTPRA-207ENST00000431048 ZNF772Q68DY9 489 aaPredicted RBP34.27■■■■□ 3.08
PTPRA-207ENST00000431048 C14orf37Q86TY3 774 aa34.27■■■■□ 3.08
PTPRA-207ENST00000431048 DIP2AQ14689 1571 aa34.25■■■■□ 3.07
PTPRA-207ENST00000431048 CHGAP10645 457 aaKnown RBP34.25■■■■□ 3.07
PTPRA-207ENST00000431048 ATF3P18847 181 aa34.25■■■■□ 3.07
PTPRA-207ENST00000431048 LRP6O75581 1613 aa34.24■■■■□ 3.07
PTPRA-207ENST00000431048 AHDC1Q5TGY3 1603 aaPredicted RBP34.24■■■■□ 3.07
PTPRA-207ENST00000431048 SETD1AO15047 1707 aaKnown RBP34.22■■■■□ 3.07
PTPRA-207ENST00000431048 UNC13BO14795 1591 aa34.21■■■■□ 3.07
PTPRA-207ENST00000431048 MEX3CQ5U5Q3 659 aaKnown RBP34.21■■■■□ 3.07
PTPRA-207ENST00000431048 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.21■■■■□ 3.07
PTPRA-207ENST00000431048 NUTM2DQ5VT03 806 aaPredicted RBP34.19■■■■□ 3.06
PTPRA-207ENST00000431048 UPF1Q92900 1129 aaKnown RBP eCLIP34.17■■■■□ 3.06
PTPRA-207ENST00000431048 AMOTL2Q9Y2J4 779 aa34.17■■■■□ 3.06
PTPRA-207ENST00000431048 SHPRHQ149N8 1683 aa34.15■■■■□ 3.06
PTPRA-207ENST00000431048 E9PCH4 1651 aa34.15■■■■□ 3.06
PTPRA-207ENST00000431048 BRINP3Q76B58 766 aa34.14■■■■□ 3.06
PTPRA-207ENST00000431048 ROCK1Q13464 1354 aa34.13■■■■□ 3.05
PTPRA-207ENST00000431048 TRPM2O94759 1503 aa34.13■■■■□ 3.05
PTPRA-207ENST00000431048 PTPRUQ92729 1446 aa34.12■■■■□ 3.05
PTPRA-207ENST00000431048 DCCP43146 1447 aa34.11■■■■□ 3.05
PTPRA-207ENST00000431048 RXRBP28702 533 aa34.09■■■■□ 3.05
PTPRA-207ENST00000431048 TRIM52Q96A61 297 aa34.09■■■■□ 3.05
PTPRA-207ENST00000431048 IQGAP3Q86VI3 1631 aa34.08■■■■□ 3.05
PTPRA-207ENST00000431048 CDK12Q9NYV4 1490 aaPredicted RBP34.04■■■■□ 3.04
PTPRA-207ENST00000431048 NUP155O75694 1391 aa34.04■■■■□ 3.04
PTPRA-207ENST00000431048 SETD5Q9C0A6 1442 aa34.04■■■■□ 3.04
PTPRA-207ENST00000431048 NUTM2BA6NNL0 878 aaPredicted RBP34■■■■□ 3.03
PTPRA-207ENST00000431048 NUTM2EB1AL46 878 aaPredicted RBP34■■■■□ 3.03
PTPRA-207ENST00000431048 NUTM2AQ8IVF1 878 aaPredicted RBP34■■■■□ 3.03
PTPRA-207ENST00000431048 ASXL1Q8IXJ9 1541 aa33.99■■■■□ 3.03
PTPRA-207ENST00000431048 MST1RQ04912 1400 aa33.98■■■■□ 3.03
PTPRA-207ENST00000431048 LRRC59Q96AG4 307 aaKnown RBP33.98■■■■□ 3.03
PTPRA-207ENST00000431048 SETBP1Q9Y6X0 1596 aa33.98■■■■□ 3.03
PTPRA-207ENST00000431048 XRN1Q8IZH2 1706 aaKnown RBP33.97■■■■□ 3.03
PTPRA-207ENST00000431048 AFF2P51816 1311 aa33.96■■■■□ 3.03
PTPRA-207ENST00000431048 NRXN3Q9Y4C0 1643 aa33.95■■■■□ 3.03
PTPRA-207ENST00000431048 NHSL1Q5SYE7 1610 aa33.91■■■■□ 3.02
PTPRA-207ENST00000431048 METP08581 1390 aa33.91■■■■□ 3.02
PTPRA-207ENST00000431048 ZNF326Q5BKZ1 582 aaKnown RBP33.88■■■■□ 3.01
PTPRA-207ENST00000431048 ADGRL3Q9HAR2 1447 aa33.87■■■■□ 3.01
PTPRA-207ENST00000431048 RBM6P78332 1123 aaKnown RBP33.85■■■■□ 3.01
PTPRA-207ENST00000431048 QTRT2Q9H974 415 aaKnown RBP33.85■■■■□ 3.01
PTPRA-207ENST00000431048 PNPLA6Q8IY17 1366 aa33.85■■■■□ 3.01
PTPRA-207ENST00000431048 C8orf37Q96NL8 207 aa33.82■■■■□ 3
PTPRA-207ENST00000431048 SPHKAPQ2M3C7 1700 aa33.82■■■■□ 3
PTPRA-207ENST00000431048 DDX17Q92841 729 aaKnown RBP33.8■■■■□ 3
PTPRA-207ENST00000431048 ITGAEP38570 1179 aa33.78■■■■□ 3
PTPRA-207ENST00000431048 RGS12O14924 1447 aa33.78■■■■□ 3
PTPRA-207ENST00000431048 C1orf167Q5SNV9 1468 aa33.75■■■□□ 2.99
PTPRA-207ENST00000431048 NEXMIFQ5QGS0 1516 aa33.74■■■□□ 2.99
PTPRA-207ENST00000431048 NGLY1Q96IV0 654 aa33.72■■■□□ 2.99
PTPRA-207ENST00000431048 NALCNQ8IZF0 1738 aa33.71■■■□□ 2.99
PTPRA-207ENST00000431048 SOS2Q07890 1332 aaPredicted RBP33.71■■■□□ 2.99
PTPRA-207ENST00000431048 LAMC1P11047 1609 aa33.71■■■□□ 2.99
PTPRA-207ENST00000431048 PTCH1Q13635 1447 aa33.69■■■□□ 2.98
PTPRA-207ENST00000431048 CLTCL1P53675 1640 aa33.68■■■□□ 2.98
PTPRA-207ENST00000431048 ADAMTS2O95450 1211 aa33.67■■■□□ 2.98
PTPRA-207ENST00000431048 VGFO15240 615 aaPredicted RBP33.66■■■□□ 2.98
PTPRA-207ENST00000431048 PRAG1Q86YV5 1406 aa33.64■■■□□ 2.98
PTPRA-207ENST00000431048 ORAI2Q96SN7 254 aa33.64■■■□□ 2.98
PTPRA-207ENST00000431048 FNBP4Q8N3X1 1017 aaPredicted RBP33.63■■■□□ 2.97
PTPRA-207ENST00000431048 ROBO2Q9HCK4 1378 aa33.62■■■□□ 2.97
PTPRA-207ENST00000431048 USP21Q9UK80 565 aa33.62■■■□□ 2.97
PTPRA-207ENST00000431048 TRPC5Q9UL62 973 aaPredicted RBP33.62■■■□□ 2.97
PTPRA-207ENST00000431048 ATAD2Q6PL18 1390 aa33.6■■■□□ 2.97
PTPRA-207ENST00000431048 RPGRIP1LQ68CZ1 1315 aa33.59■■■□□ 2.97
PTPRA-207ENST00000431048 KIF1BO60333 1816 aa33.58■■■□□ 2.97
PTPRA-207ENST00000431048 HFM1A2PYH4 1435 aa33.55■■■□□ 2.96
PTPRA-207ENST00000431048 SRCAPQ6ZRS2 3230 aa33.55■■■□□ 2.96
PTPRA-207ENST00000431048 ATRNO75882 1429 aa33.53■■■□□ 2.96
PTPRA-207ENST00000431048 NAIPQ13075 1403 aa33.51■■■□□ 2.95
PTPRA-207ENST00000431048 COL22A1Q8NFW1 1626 aaPredicted RBP33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms