RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 NPHP4O75161 1426 aaPredicted RBP29.5■■■□□ 2.31
CSNK1E-207ENST00000430335 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.49■■■□□ 2.31
CSNK1E-207ENST00000430335 PCGF6Q9BYE7 350 aa29.48■■■□□ 2.31
CSNK1E-207ENST00000430335 KIF1BO60333 1816 aa29.48■■■□□ 2.31
CSNK1E-207ENST00000430335 ZNF326Q5BKZ1 582 aaKnown RBP29.45■■■□□ 2.31
CSNK1E-207ENST00000430335 SPATA31E1Q6ZUB1 1445 aa29.43■■■□□ 2.3
CSNK1E-207ENST00000430335 IQGAP1P46940 1657 aa29.42■■■□□ 2.3
CSNK1E-207ENST00000430335 RPGRIP1LQ68CZ1 1315 aa29.42■■■□□ 2.3
CSNK1E-207ENST00000430335 PPP1R15AO75807 674 aaPredicted RBP29.41■■■□□ 2.3
CSNK1E-207ENST00000430335 PLEKHG1Q9ULL1 1385 aa29.4■■■□□ 2.3
CSNK1E-207ENST00000430335 DHX57Q6P158 1386 aaKnown RBP29.39■■■□□ 2.3
CSNK1E-207ENST00000430335 NEXMIFQ5QGS0 1516 aa29.38■■■□□ 2.29
CSNK1E-207ENST00000430335 NUTM2DQ5VT03 806 aaPredicted RBP29.35■■■□□ 2.29
CSNK1E-207ENST00000430335 RGL3Q3MIN7 710 aa29.32■■■□□ 2.28
CSNK1E-207ENST00000430335 VGFO15240 615 aaPredicted RBP29.31■■■□□ 2.28
CSNK1E-207ENST00000430335 ZNF335Q9H4Z2 1342 aaPredicted RBP29.29■■■□□ 2.28
CSNK1E-207ENST00000430335 BCANQ96GW7 911 aa29.29■■■□□ 2.28
CSNK1E-207ENST00000430335 SLC26A8Q96RN1 970 aa29.28■■■□□ 2.28
CSNK1E-207ENST00000430335 TBX22Q9Y458 520 aa29.27■■■□□ 2.28
CSNK1E-207ENST00000430335 ADAMTS13Q76LX8 1427 aa29.27■■■□□ 2.28
CSNK1E-207ENST00000430335 PPLO60437 1756 aa29.26■■■□□ 2.27
CSNK1E-207ENST00000430335 SETBP1Q9Y6X0 1596 aa29.26■■■□□ 2.27
CSNK1E-207ENST00000430335 LTBP4Q8N2S1 1624 aa29.25■■■□□ 2.27
CSNK1E-207ENST00000430335 DIP2AQ14689 1571 aa29.23■■■□□ 2.27
CSNK1E-207ENST00000430335 IFT172Q9UG01 1749 aa29.21■■■□□ 2.27
CSNK1E-207ENST00000430335 SENP3Q9H4L4 574 aaPredicted RBP29.21■■■□□ 2.27
CSNK1E-207ENST00000430335 NRXN3Q9Y4C0 1643 aa29.2■■■□□ 2.27
CSNK1E-207ENST00000430335 ADGRF5Q8IZF2 1346 aa29.19■■■□□ 2.26
CSNK1E-207ENST00000430335 PIK3R4Q99570 1358 aa29.18■■■□□ 2.26
CSNK1E-207ENST00000430335 STAC3Q96MF2 364 aa29.18■■■□□ 2.26
CSNK1E-207ENST00000430335 MYOM2P54296 1465 aa29.17■■■□□ 2.26
CSNK1E-207ENST00000430335 CPS1P31327 1500 aa29.17■■■□□ 2.26
CSNK1E-207ENST00000430335 KCNA6P17658 529 aa29.17■■■□□ 2.26
CSNK1E-207ENST00000430335 SIN3AQ96ST3 1273 aa29.16■■■□□ 2.26
CSNK1E-207ENST00000430335 CERKQ8TCT0 537 aa29.15■■■□□ 2.26
CSNK1E-207ENST00000430335 NRXN1Q9ULB1 1477 aa29.14■■■□□ 2.26
CSNK1E-207ENST00000430335 PIK3C2GO75747 1445 aa29.12■■■□□ 2.25
CSNK1E-207ENST00000430335 DCAF11Q8TEB1 546 aa29.12■■■□□ 2.25
CSNK1E-207ENST00000430335 NWD1Q149M9 1564 aa29.11■■■□□ 2.25
CSNK1E-207ENST00000430335 ALKQ9UM73 1620 aa29.1■■■□□ 2.25
CSNK1E-207ENST00000430335 STRCP1A6NGW2 1772 aa29.1■■■□□ 2.25
CSNK1E-207ENST00000430335 NEUROD1Q13562 356 aa29.09■■■□□ 2.25
CSNK1E-207ENST00000430335 METP08581 1390 aa29.09■■■□□ 2.25
CSNK1E-207ENST00000430335 IQSEC2Q5JU85 1478 aa29.08■■■□□ 2.25
CSNK1E-207ENST00000430335 CHD2O14647 1828 aaKnown RBP29.07■■■□□ 2.24
CSNK1E-207ENST00000430335 NKTRP30414 1462 aaKnown RBP29.06■■■□□ 2.24
CSNK1E-207ENST00000430335 PTPRUQ92729 1446 aa29.06■■■□□ 2.24
CSNK1E-207ENST00000430335 KDM2AQ9Y2K7 1162 aa29.06■■■□□ 2.24
CSNK1E-207ENST00000430335 LRRC7Q96NW7 1537 aa29.05■■■□□ 2.24
CSNK1E-207ENST00000430335 CLSPNQ9HAW4 1339 aa29.05■■■□□ 2.24
CSNK1E-207ENST00000430335 SETD1AO15047 1707 aaKnown RBP29.05■■■□□ 2.24
CSNK1E-207ENST00000430335 C14orf93Q9H972 538 aaKnown RBP29.04■■■□□ 2.24
CSNK1E-207ENST00000430335 AMOTL2Q9Y2J4 779 aa29.03■■■□□ 2.24
CSNK1E-207ENST00000430335 L3MBTL2Q969R5 705 aa29.02■■■□□ 2.24
CSNK1E-207ENST00000430335 PROSER2Q86WR7 435 aaPredicted RBP28.99■■■□□ 2.23
CSNK1E-207ENST00000430335 CFAP70Q5T0N1 1121 aa28.98■■■□□ 2.23
CSNK1E-207ENST00000430335 XRN1Q8IZH2 1706 aaKnown RBP28.97■■■□□ 2.23
CSNK1E-207ENST00000430335 PRAG1Q86YV5 1406 aa28.97■■■□□ 2.23
CSNK1E-207ENST00000430335 LAMC1P11047 1609 aa28.97■■■□□ 2.23
CSNK1E-207ENST00000430335 TMEM94Q12767 1356 aa28.96■■■□□ 2.23
CSNK1E-207ENST00000430335 ASXL1Q8IXJ9 1541 aa28.94■■■□□ 2.22
CSNK1E-207ENST00000430335 NCOA3Q9Y6Q9 1424 aa28.94■■■□□ 2.22
CSNK1E-207ENST00000430335 TONSLQ96HA7 1378 aa28.93■■■□□ 2.22
CSNK1E-207ENST00000430335 CCER1Q8TC90 406 aaPredicted RBP28.93■■■□□ 2.22
CSNK1E-207ENST00000430335 LRPPRCP42704 1394 aaKnown RBP28.92■■■□□ 2.22
CSNK1E-207ENST00000430335 TMEM132EQ6IEE7 984 aa28.92■■■□□ 2.22
CSNK1E-207ENST00000430335 PTCH1Q13635 1447 aa28.92■■■□□ 2.22
CSNK1E-207ENST00000430335 ABCC11Q96J66 1382 aa28.9■■■□□ 2.22
CSNK1E-207ENST00000430335 TECPR2O15040 1411 aa28.89■■■□□ 2.22
CSNK1E-207ENST00000430335 YTHDC2Q9H6S0 1430 aaKnown RBP28.88■■■□□ 2.21
CSNK1E-207ENST00000430335 ADGRB1O14514 1584 aa28.88■■■□□ 2.21
CSNK1E-207ENST00000430335 XIRP1Q702N8 1843 aaKnown RBP28.87■■■□□ 2.21
CSNK1E-207ENST00000430335 RBM33Q96EV2 1170 aaKnown RBP28.87■■■□□ 2.21
CSNK1E-207ENST00000430335 FBXO41Q8TF61 875 aa28.86■■■□□ 2.21
CSNK1E-207ENST00000430335 ROBO2Q9HCK4 1378 aa28.86■■■□□ 2.21
CSNK1E-207ENST00000430335 KIAA1210Q9ULL0 1709 aa28.84■■■□□ 2.21
CSNK1E-207ENST00000430335 STK26Q9P289 416 aa28.84■■■□□ 2.21
CSNK1E-207ENST00000430335 SIRT1Q96EB6 747 aa28.83■■■□□ 2.21
CSNK1E-207ENST00000430335 TIMELESSQ9UNS1 1208 aa28.83■■■□□ 2.21
CSNK1E-207ENST00000430335 MSH6P52701 1360 aa28.82■■■□□ 2.2
CSNK1E-207ENST00000430335 KNDC1Q76NI1 1749 aa28.81■■■□□ 2.2
CSNK1E-207ENST00000430335 UBAP1LF5GYI3 381 aa28.81■■■□□ 2.2
CSNK1E-207ENST00000430335 TOM1O60784 492 aa28.81■■■□□ 2.2
CSNK1E-207ENST00000430335 C19orf44Q9H6X5 657 aa28.8■■■□□ 2.2
CSNK1E-207ENST00000430335 FAM135BQ49AJ0 1406 aa28.78■■■□□ 2.2
CSNK1E-207ENST00000430335 C14orf37Q86TY3 774 aa28.78■■■□□ 2.2
CSNK1E-207ENST00000430335 DLC1Q96QB1 1528 aa28.77■■■□□ 2.2
CSNK1E-207ENST00000430335 NBPF1Q3BBV0 1214 aa28.76■■■□□ 2.19
CSNK1E-207ENST00000430335 NBPF8Q3BBV2 869 aa28.76■■■□□ 2.19
CSNK1E-207ENST00000430335 ADGRL3Q9HAR2 1447 aa28.76■■■□□ 2.19
CSNK1E-207ENST00000430335 DCCP43146 1447 aa28.74■■■□□ 2.19
CSNK1E-207ENST00000430335 WAPLQ7Z5K2 1190 aa28.73■■■□□ 2.19
CSNK1E-207ENST00000430335 TRAK1Q9UPV9 953 aa28.73■■■□□ 2.19
CSNK1E-207ENST00000430335 CADPS2Q86UW7 1296 aa28.72■■■□□ 2.19
CSNK1E-207ENST00000430335 TRPM1Q7Z4N2 1603 aa28.72■■■□□ 2.19
CSNK1E-207ENST00000430335 PLEKHH1Q9ULM0 1364 aa28.71■■■□□ 2.19
CSNK1E-207ENST00000430335 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.69■■■□□ 2.18
CSNK1E-207ENST00000430335 ATF3P18847 181 aa28.69■■■□□ 2.18
CSNK1E-207ENST00000430335 PRAM1Q96QH2 718 aa28.69■■■□□ 2.18
CSNK1E-207ENST00000430335 ROCK2O75116 1388 aaKnown RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms