RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 ZNF326Q5BKZ1 582 aaKnown RBP32.7■■■□□ 2.83
PTPN18-205ENST00000428843 DMRT2Q9Y5R5 561 aa32.7■■■□□ 2.83
PTPN18-205ENST00000428843 MED14O60244 1454 aa32.68■■■□□ 2.82
PTPN18-205ENST00000428843 NPHP4O75161 1426 aaPredicted RBP32.67■■■□□ 2.82
PTPN18-205ENST00000428843 SPATA31E1Q6ZUB1 1445 aa32.66■■■□□ 2.82
PTPN18-205ENST00000428843 HDGFP51858 240 aaKnown RBP32.65■■■□□ 2.82
PTPN18-205ENST00000428843 IQGAP1P46940 1657 aa32.65■■■□□ 2.82
PTPN18-205ENST00000428843 NEXMIFQ5QGS0 1516 aa32.64■■■□□ 2.82
PTPN18-205ENST00000428843 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.64■■■□□ 2.82
PTPN18-205ENST00000428843 NUTM2DQ5VT03 806 aaPredicted RBP32.63■■■□□ 2.81
PTPN18-205ENST00000428843 PPP1R15AO75807 674 aaPredicted RBP32.61■■■□□ 2.81
PTPN18-205ENST00000428843 RGL3Q3MIN7 710 aa32.61■■■□□ 2.81
PTPN18-205ENST00000428843 PPLO60437 1756 aa32.58■■■□□ 2.81
PTPN18-205ENST00000428843 RPGRIP1LQ68CZ1 1315 aa32.57■■■□□ 2.8
PTPN18-205ENST00000428843 PLEKHG1Q9ULL1 1385 aa32.56■■■□□ 2.8
PTPN18-205ENST00000428843 IFT172Q9UG01 1749 aa32.54■■■□□ 2.8
PTPN18-205ENST00000428843 SENP3Q9H4L4 574 aaPredicted RBP32.53■■■□□ 2.8
PTPN18-205ENST00000428843 BCANQ96GW7 911 aa32.51■■■□□ 2.79
PTPN18-205ENST00000428843 SIN3AQ96ST3 1273 aa32.49■■■□□ 2.79
PTPN18-205ENST00000428843 VGFO15240 615 aaPredicted RBP32.48■■■□□ 2.79
PTPN18-205ENST00000428843 SLC26A8Q96RN1 970 aa32.46■■■□□ 2.79
PTPN18-205ENST00000428843 SETBP1Q9Y6X0 1596 aa32.45■■■□□ 2.78
PTPN18-205ENST00000428843 NRXN3Q9Y4C0 1643 aa32.44■■■□□ 2.78
PTPN18-205ENST00000428843 ADAMTS13Q76LX8 1427 aa32.43■■■□□ 2.78
PTPN18-205ENST00000428843 NEUROD1Q13562 356 aa32.43■■■□□ 2.78
PTPN18-205ENST00000428843 ADGRF5Q8IZF2 1346 aa32.42■■■□□ 2.78
PTPN18-205ENST00000428843 ZNF335Q9H4Z2 1342 aaPredicted RBP32.42■■■□□ 2.78
PTPN18-205ENST00000428843 DIP2AQ14689 1571 aa32.41■■■□□ 2.78
PTPN18-205ENST00000428843 MYOM2P54296 1465 aa32.39■■■□□ 2.78
PTPN18-205ENST00000428843 TBX22Q9Y458 520 aa32.38■■■□□ 2.77
PTPN18-205ENST00000428843 DCAF11Q8TEB1 546 aa32.37■■■□□ 2.77
PTPN18-205ENST00000428843 LTBP4Q8N2S1 1624 aa32.35■■■□□ 2.77
PTPN18-205ENST00000428843 STRCP1A6NGW2 1772 aa32.35■■■□□ 2.77
PTPN18-205ENST00000428843 KDM2AQ9Y2K7 1162 aa32.34■■■□□ 2.77
PTPN18-205ENST00000428843 NRXN1Q9ULB1 1477 aa32.33■■■□□ 2.77
PTPN18-205ENST00000428843 ALKQ9UM73 1620 aa32.33■■■□□ 2.77
PTPN18-205ENST00000428843 PIK3C2GO75747 1445 aa32.32■■■□□ 2.76
PTPN18-205ENST00000428843 SETD1AO15047 1707 aaKnown RBP32.31■■■□□ 2.76
PTPN18-205ENST00000428843 CCER1Q8TC90 406 aaPredicted RBP32.3■■■□□ 2.76
PTPN18-205ENST00000428843 CHD2O14647 1828 aaKnown RBP32.3■■■□□ 2.76
PTPN18-205ENST00000428843 STAC3Q96MF2 364 aa32.29■■■□□ 2.76
PTPN18-205ENST00000428843 CLSPNQ9HAW4 1339 aa32.28■■■□□ 2.76
PTPN18-205ENST00000428843 L3MBTL2Q969R5 705 aa32.28■■■□□ 2.76
PTPN18-205ENST00000428843 METP08581 1390 aa32.27■■■□□ 2.76
PTPN18-205ENST00000428843 KCNA6P17658 529 aa32.26■■■□□ 2.75
PTPN18-205ENST00000428843 PIK3R4Q99570 1358 aa32.26■■■□□ 2.75
PTPN18-205ENST00000428843 NWD1Q149M9 1564 aa32.26■■■□□ 2.75
PTPN18-205ENST00000428843 CPS1P31327 1500 aa32.26■■■□□ 2.75
PTPN18-205ENST00000428843 PTPRUQ92729 1446 aa32.23■■■□□ 2.75
PTPN18-205ENST00000428843 LAMC1P11047 1609 aa32.21■■■□□ 2.75
PTPN18-205ENST00000428843 TONSLQ96HA7 1378 aa32.2■■■□□ 2.75
PTPN18-205ENST00000428843 C14orf93Q9H972 538 aaKnown RBP32.2■■■□□ 2.75
PTPN18-205ENST00000428843 CFAP70Q5T0N1 1121 aa32.19■■■□□ 2.74
PTPN18-205ENST00000428843 XRN1Q8IZH2 1706 aaKnown RBP32.17■■■□□ 2.74
PTPN18-205ENST00000428843 CERKQ8TCT0 537 aa32.17■■■□□ 2.74
PTPN18-205ENST00000428843 AMOTL2Q9Y2J4 779 aa32.17■■■□□ 2.74
PTPN18-205ENST00000428843 NKTRP30414 1462 aaKnown RBP32.16■■■□□ 2.74
PTPN18-205ENST00000428843 ASXL1Q8IXJ9 1541 aa32.16■■■□□ 2.74
PTPN18-205ENST00000428843 PRAG1Q86YV5 1406 aa32.16■■■□□ 2.74
PTPN18-205ENST00000428843 LRRC7Q96NW7 1537 aa32.16■■■□□ 2.74
PTPN18-205ENST00000428843 TMEM132EQ6IEE7 984 aa32.13■■■□□ 2.73
PTPN18-205ENST00000428843 PROSER2Q86WR7 435 aaPredicted RBP32.11■■■□□ 2.73
PTPN18-205ENST00000428843 XIRP1Q702N8 1843 aaKnown RBP32.1■■■□□ 2.73
PTPN18-205ENST00000428843 KIAA1210Q9ULL0 1709 aa32.09■■■□□ 2.73
PTPN18-205ENST00000428843 IQSEC2Q5JU85 1478 aa32.07■■■□□ 2.72
PTPN18-205ENST00000428843 ADGRB1O14514 1584 aa32.07■■■□□ 2.72
PTPN18-205ENST00000428843 LRPPRCP42704 1394 aaKnown RBP32.07■■■□□ 2.72
PTPN18-205ENST00000428843 RBM33Q96EV2 1170 aaKnown RBP32.06■■■□□ 2.72
PTPN18-205ENST00000428843 TMEM94Q12767 1356 aa32.06■■■□□ 2.72
PTPN18-205ENST00000428843 YTHDC2Q9H6S0 1430 aaKnown RBP32.05■■■□□ 2.72
PTPN18-205ENST00000428843 STK26Q9P289 416 aa32.04■■■□□ 2.72
PTPN18-205ENST00000428843 KNDC1Q76NI1 1749 aa32.03■■■□□ 2.72
PTPN18-205ENST00000428843 PTCH1Q13635 1447 aa32.02■■■□□ 2.72
PTPN18-205ENST00000428843 TRPM1Q7Z4N2 1603 aa32.01■■■□□ 2.72
PTPN18-205ENST00000428843 NBPF8Q3BBV2 869 aa32.01■■■□□ 2.71
PTPN18-205ENST00000428843 ABCC11Q96J66 1382 aa32.01■■■□□ 2.71
PTPN18-205ENST00000428843 ROBO2Q9HCK4 1378 aa32.01■■■□□ 2.71
PTPN18-205ENST00000428843 TIMELESSQ9UNS1 1208 aa32■■■□□ 2.71
PTPN18-205ENST00000428843 TECPR2O15040 1411 aa32■■■□□ 2.71
PTPN18-205ENST00000428843 NBPF1Q3BBV0 1214 aa31.98■■■□□ 2.71
PTPN18-205ENST00000428843 NCOA3Q9Y6Q9 1424 aa31.96■■■□□ 2.71
PTPN18-205ENST00000428843 TRAK1Q9UPV9 953 aa31.92■■■□□ 2.7
PTPN18-205ENST00000428843 DLC1Q96QB1 1528 aa31.91■■■□□ 2.7
PTPN18-205ENST00000428843 C14orf37Q86TY3 774 aa31.91■■■□□ 2.7
PTPN18-205ENST00000428843 WAPLQ7Z5K2 1190 aa31.9■■■□□ 2.7
PTPN18-205ENST00000428843 SIRT1Q96EB6 747 aa31.89■■■□□ 2.7
PTPN18-205ENST00000428843 ROCK2O75116 1388 aaKnown RBP31.89■■■□□ 2.7
PTPN18-205ENST00000428843 MSH6P52701 1360 aa31.89■■■□□ 2.7
PTPN18-205ENST00000428843 FAM135BQ49AJ0 1406 aa31.89■■■□□ 2.7
PTPN18-205ENST00000428843 NALCNQ8IZF0 1738 aa31.89■■■□□ 2.69
PTPN18-205ENST00000428843 PLEKHH1Q9ULM0 1364 aa31.88■■■□□ 2.69
PTPN18-205ENST00000428843 RALGAPBQ86X10 1494 aa31.88■■■□□ 2.69
PTPN18-205ENST00000428843 ARHGEF28Q8N1W1 1705 aaKnown RBP31.87■■■□□ 2.69
PTPN18-205ENST00000428843 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.87■■■□□ 2.69
PTPN18-205ENST00000428843 ADGRL3Q9HAR2 1447 aa31.85■■■□□ 2.69
PTPN18-205ENST00000428843 UBAP1LF5GYI3 381 aa31.85■■■□□ 2.69
PTPN18-205ENST00000428843 C19orf44Q9H6X5 657 aa31.85■■■□□ 2.69
PTPN18-205ENST00000428843 PRAM1Q96QH2 718 aa31.84■■■□□ 2.69
PTPN18-205ENST00000428843 GPRASP1Q5JY77 1395 aa31.82■■■□□ 2.69
PTPN18-205ENST00000428843 TOM1O60784 492 aa31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms