RNA–Protein interactions for RNA: ENST00000428274.5

PHF1-205, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-205ENST00000428274 LRRC7Q96NW7 1537 aa19.78■□□□□ 0.76
PHF1-205ENST00000428274 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
PHF1-205ENST00000428274 SPHKAPQ2M3C7 1700 aa19.77■□□□□ 0.76
PHF1-205ENST00000428274 TOM1O60784 492 aa19.77■□□□□ 0.76
PHF1-205ENST00000428274 SLC26A8Q96RN1 970 aa19.75■□□□□ 0.75
PHF1-205ENST00000428274 RIMS2Q9UQ26 1411 aa19.74■□□□□ 0.75
PHF1-205ENST00000428274 HDGFP51858 240 aaKnown RBP19.72■□□□□ 0.75
PHF1-205ENST00000428274 RBM33Q96EV2 1170 aaKnown RBP19.72■□□□□ 0.75
PHF1-205ENST00000428274 CHGAP10645 457 aaKnown RBP19.71■□□□□ 0.75
PHF1-205ENST00000428274 TRIM52Q96A61 297 aa19.71■□□□□ 0.75
PHF1-205ENST00000428274 PLEKHG1Q9ULL1 1385 aa19.7■□□□□ 0.74
PHF1-205ENST00000428274 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.69■□□□□ 0.74
PHF1-205ENST00000428274 TRPM2O94759 1503 aa19.69■□□□□ 0.74
PHF1-205ENST00000428274 XIRP1Q702N8 1843 aaKnown RBP19.67■□□□□ 0.74
PHF1-205ENST00000428274 CLTCL1P53675 1640 aa19.67■□□□□ 0.74
PHF1-205ENST00000428274 KCNA6P17658 529 aa19.67■□□□□ 0.74
PHF1-205ENST00000428274 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
PHF1-205ENST00000428274 SLC4A1APQ9BWU0 796 aaKnown RBP19.67■□□□□ 0.74
PHF1-205ENST00000428274 PPP1R15AO75807 674 aaPredicted RBP19.66■□□□□ 0.74
PHF1-205ENST00000428274 TBX22Q9Y458 520 aa19.64■□□□□ 0.73
PHF1-205ENST00000428274 TMEM94Q12767 1356 aa19.64■□□□□ 0.73
PHF1-205ENST00000428274 CHD2O14647 1828 aaKnown RBP19.64■□□□□ 0.73
PHF1-205ENST00000428274 KIF1BO60333 1816 aa19.64■□□□□ 0.73
PHF1-205ENST00000428274 NWD1Q149M9 1564 aa19.63■□□□□ 0.73
PHF1-205ENST00000428274 BCANQ96GW7 911 aa19.63■□□□□ 0.73
PHF1-205ENST00000428274 ADAMTS13Q76LX8 1427 aa19.62■□□□□ 0.73
PHF1-205ENST00000428274 SETD5Q9C0A6 1442 aa19.62■□□□□ 0.73
PHF1-205ENST00000428274 PROSER2Q86WR7 435 aaPredicted RBP19.61■□□□□ 0.73
PHF1-205ENST00000428274 ACIN1Q9UKV3 1341 aaKnown RBP19.6■□□□□ 0.73
PHF1-205ENST00000428274 NKTRP30414 1462 aaKnown RBP19.6■□□□□ 0.73
PHF1-205ENST00000428274 DIP2AQ14689 1571 aa19.59■□□□□ 0.73
PHF1-205ENST00000428274 MPHOSPH9Q99550 1183 aa19.59■□□□□ 0.73
PHF1-205ENST00000428274 FOXD1Q16676 465 aa19.58■□□□□ 0.72
PHF1-205ENST00000428274 ZNF326Q5BKZ1 582 aaKnown RBP19.58■□□□□ 0.72
PHF1-205ENST00000428274 NEXMIFQ5QGS0 1516 aa19.57■□□□□ 0.72
PHF1-205ENST00000428274 NRXN3Q9Y4C0 1643 aa19.57■□□□□ 0.72
PHF1-205ENST00000428274 PIK3R4Q99570 1358 aa19.57■□□□□ 0.72
PHF1-205ENST00000428274 SOCS7O14512 581 aa19.56■□□□□ 0.72
PHF1-205ENST00000428274 SETBP1Q9Y6X0 1596 aa19.56■□□□□ 0.72
PHF1-205ENST00000428274 RAB3GAP2Q9H2M9 1393 aa19.54■□□□□ 0.72
PHF1-205ENST00000428274 MED1Q15648 1581 aaPredicted RBP19.53■□□□□ 0.72
PHF1-205ENST00000428274 RPGRIP1LQ68CZ1 1315 aa19.51■□□□□ 0.71
PHF1-205ENST00000428274 FAM135BQ49AJ0 1406 aa19.51■□□□□ 0.71
PHF1-205ENST00000428274 PTPRUQ92729 1446 aa19.51■□□□□ 0.71
PHF1-205ENST00000428274 CCDC144AA2RUR9 1427 aa19.5■□□□□ 0.71
PHF1-205ENST00000428274 PPLO60437 1756 aa19.49■□□□□ 0.71
PHF1-205ENST00000428274 NCOA3Q9Y6Q9 1424 aa19.49■□□□□ 0.71
PHF1-205ENST00000428274 VGFO15240 615 aaPredicted RBP19.48■□□□□ 0.71
PHF1-205ENST00000428274 HRCP23327 699 aa19.48■□□□□ 0.71
PHF1-205ENST00000428274 AMOTL2Q9Y2J4 779 aa19.48■□□□□ 0.71
PHF1-205ENST00000428274 SPATA31E1Q6ZUB1 1445 aa19.48■□□□□ 0.71
PHF1-205ENST00000428274 METP08581 1390 aa19.47■□□□□ 0.71
PHF1-205ENST00000428274 XRN1Q8IZH2 1706 aaKnown RBP19.46■□□□□ 0.71
PHF1-205ENST00000428274 SLAIN2Q9P270 581 aa19.45■□□□□ 0.7
PHF1-205ENST00000428274 MSH6P52701 1360 aa19.44■□□□□ 0.7
PHF1-205ENST00000428274 RGS17Q9UGC6 210 aaPredicted RBP19.44■□□□□ 0.7
PHF1-205ENST00000428274 SETD1AO15047 1707 aaKnown RBP19.44■□□□□ 0.7
PHF1-205ENST00000428274 IFT172Q9UG01 1749 aa19.42■□□□□ 0.7
PHF1-205ENST00000428274 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.4■□□□□ 0.7
PHF1-205ENST00000428274 RGL3Q3MIN7 710 aa19.4■□□□□ 0.7
PHF1-205ENST00000428274 C19orf44Q9H6X5 657 aa19.4■□□□□ 0.7
PHF1-205ENST00000428274 C14orf37Q86TY3 774 aa19.39■□□□□ 0.69
PHF1-205ENST00000428274 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
PHF1-205ENST00000428274 ANKRD30BQ9BXX2 1392 aa19.39■□□□□ 0.69
PHF1-205ENST00000428274 ROBO1Q9Y6N7 1651 aa19.39■□□□□ 0.69
PHF1-205ENST00000428274 ADGRF5Q8IZF2 1346 aa19.38■□□□□ 0.69
PHF1-205ENST00000428274 PRAG1Q86YV5 1406 aa19.35■□□□□ 0.69
PHF1-205ENST00000428274 CADPS2Q86UW7 1296 aa19.35■□□□□ 0.69
PHF1-205ENST00000428274 DCCP43146 1447 aa19.34■□□□□ 0.69
PHF1-205ENST00000428274 ATF3P18847 181 aa19.33■□□□□ 0.68
PHF1-205ENST00000428274 PTCH1Q13635 1447 aa19.33■□□□□ 0.68
PHF1-205ENST00000428274 PIK3C2GO75747 1445 aa19.32■□□□□ 0.68
PHF1-205ENST00000428274 ADGRL3Q9HAR2 1447 aa19.31■□□□□ 0.68
PHF1-205ENST00000428274 ROBO2Q9HCK4 1378 aa19.31■□□□□ 0.68
PHF1-205ENST00000428274 NRXN1Q9ULB1 1477 aa19.3■□□□□ 0.68
PHF1-205ENST00000428274 POTEAQ6S8J7 498 aa19.3■□□□□ 0.68
PHF1-205ENST00000428274 BRINP3Q76B58 766 aa19.3■□□□□ 0.68
PHF1-205ENST00000428274 NALCNQ8IZF0 1738 aa19.29■□□□□ 0.68
PHF1-205ENST00000428274 MYOM2P54296 1465 aa19.28■□□□□ 0.68
PHF1-205ENST00000428274 ASXL1Q8IXJ9 1541 aa19.27■□□□□ 0.68
PHF1-205ENST00000428274 TECPR2O15040 1411 aa19.26■□□□□ 0.67
PHF1-205ENST00000428274 MST1RQ04912 1400 aa19.26■□□□□ 0.67
PHF1-205ENST00000428274 PHLPP1O60346 1717 aa19.26■□□□□ 0.67
PHF1-205ENST00000428274 DDX17Q92841 729 aaKnown RBP19.26■□□□□ 0.67
PHF1-205ENST00000428274 C14orf93Q9H972 538 aaKnown RBP19.26■□□□□ 0.67
PHF1-205ENST00000428274 JCADQ9P266 1359 aa19.26■□□□□ 0.67
PHF1-205ENST00000428274 LRPPRCP42704 1394 aaKnown RBP19.25■□□□□ 0.67
PHF1-205ENST00000428274 ABCC11Q96J66 1382 aa19.24■□□□□ 0.67
PHF1-205ENST00000428274 TMEM132EQ6IEE7 984 aa19.24■□□□□ 0.67
PHF1-205ENST00000428274 COL16A1Q07092 1604 aaPredicted RBP19.24■□□□□ 0.67
PHF1-205ENST00000428274 AHDC1Q5TGY3 1603 aaPredicted RBP19.23■□□□□ 0.67
PHF1-205ENST00000428274 KNDC1Q76NI1 1749 aa19.22■□□□□ 0.67
PHF1-205ENST00000428274 LRP6O75581 1613 aa19.22■□□□□ 0.67
PHF1-205ENST00000428274 LAMC1P11047 1609 aa19.22■□□□□ 0.67
PHF1-205ENST00000428274 CFAP70Q5T0N1 1121 aa19.21■□□□□ 0.67
PHF1-205ENST00000428274 YTHDC2Q9H6S0 1430 aaKnown RBP19.21■□□□□ 0.67
PHF1-205ENST00000428274 STK26Q9P289 416 aa19.21■□□□□ 0.67
PHF1-205ENST00000428274 STAC3Q96MF2 364 aa19.2■□□□□ 0.66
PHF1-205ENST00000428274 DHX57Q6P158 1386 aaKnown RBP19.19■□□□□ 0.66
PHF1-205ENST00000428274 C1orf167Q5SNV9 1468 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms