RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 BCANQ96GW7 911 aa26.34■■□□□ 1.81
PSMD4-203ENST00000427779 ANKRD50Q9ULJ7 1429 aa26.32■■□□□ 1.8
PSMD4-203ENST00000427779 MYO5BQ9ULV0 1848 aa26.32■■□□□ 1.8
PSMD4-203ENST00000427779 MSH6P52701 1360 aa26.32■■□□□ 1.8
PSMD4-203ENST00000427779 GCC2Q8IWJ2 1684 aa26.31■■□□□ 1.8
PSMD4-203ENST00000427779 HDGFP51858 240 aaKnown RBP26.29■■□□□ 1.8
PSMD4-203ENST00000427779 FAM50AQ14320 339 aaKnown RBP26.29■■□□□ 1.8
PSMD4-203ENST00000427779 RBM33Q96EV2 1170 aaKnown RBP26.29■■□□□ 1.8
PSMD4-203ENST00000427779 CHD2O14647 1828 aaKnown RBP26.29■■□□□ 1.8
PSMD4-203ENST00000427779 PLEKHG1Q9ULL1 1385 aa26.28■■□□□ 1.8
PSMD4-203ENST00000427779 ZFYVE9O95405 1425 aa26.28■■□□□ 1.8
PSMD4-203ENST00000427779 PPP1R15AO75807 674 aaPredicted RBP26.26■■□□□ 1.79
PSMD4-203ENST00000427779 PHLPP1O60346 1717 aa26.25■■□□□ 1.79
PSMD4-203ENST00000427779 TMEM131LA2VDJ0 1609 aa26.25■■□□□ 1.79
PSMD4-203ENST00000427779 RIMS2Q9UQ26 1411 aa26.25■■□□□ 1.79
PSMD4-203ENST00000427779 UNC13BO14795 1591 aa26.23■■□□□ 1.79
PSMD4-203ENST00000427779 SLAIN2Q9P270 581 aa26.22■■□□□ 1.79
PSMD4-203ENST00000427779 POTEAQ6S8J7 498 aa26.2■■□□□ 1.78
PSMD4-203ENST00000427779 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.2■■□□□ 1.78
PSMD4-203ENST00000427779 NCOA3Q9Y6Q9 1424 aa26.19■■□□□ 1.78
PSMD4-203ENST00000427779 JCADQ9P266 1359 aa26.19■■□□□ 1.78
PSMD4-203ENST00000427779 TBX22Q9Y458 520 aa26.18■■□□□ 1.78
PSMD4-203ENST00000427779 DIP2AQ14689 1571 aa26.17■■□□□ 1.78
PSMD4-203ENST00000427779 E9PCH4 1651 aa26.17■■□□□ 1.78
PSMD4-203ENST00000427779 CHGAP10645 457 aaKnown RBP26.15■■□□□ 1.78
PSMD4-203ENST00000427779 COL16A1Q07092 1604 aaPredicted RBP26.14■■□□□ 1.77
PSMD4-203ENST00000427779 C14orf37Q86TY3 774 aa26.13■■□□□ 1.77
PSMD4-203ENST00000427779 IQGAP3Q86VI3 1631 aa26.13■■□□□ 1.77
PSMD4-203ENST00000427779 PIK3R4Q99570 1358 aa26.12■■□□□ 1.77
PSMD4-203ENST00000427779 ADAMTS13Q76LX8 1427 aa26.11■■□□□ 1.77
PSMD4-203ENST00000427779 ROCK1Q13464 1354 aa26.1■■□□□ 1.77
PSMD4-203ENST00000427779 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.1■■□□□ 1.77
PSMD4-203ENST00000427779 CADPS2Q86UW7 1296 aa26.09■■□□□ 1.77
PSMD4-203ENST00000427779 TRPM2O94759 1503 aa26.08■■□□□ 1.77
PSMD4-203ENST00000427779 ATF3P18847 181 aa26.06■■□□□ 1.76
PSMD4-203ENST00000427779 NUTM2DQ5VT03 806 aaPredicted RBP26.06■■□□□ 1.76
PSMD4-203ENST00000427779 C19orf44Q9H6X5 657 aa26.06■■□□□ 1.76
PSMD4-203ENST00000427779 SPATA31A6Q5VVP1 1343 aa26.06■■□□□ 1.76
PSMD4-203ENST00000427779 AHDC1Q5TGY3 1603 aaPredicted RBP26.06■■□□□ 1.76
PSMD4-203ENST00000427779 SETD1AO15047 1707 aaKnown RBP26.05■■□□□ 1.76
PSMD4-203ENST00000427779 SHPRHQ149N8 1683 aa26.03■■□□□ 1.76
PSMD4-203ENST00000427779 NUP155O75694 1391 aa26.02■■□□□ 1.76
PSMD4-203ENST00000427779 LRP6O75581 1613 aa26■■□□□ 1.75
PSMD4-203ENST00000427779 MEX3CQ5U5Q3 659 aaKnown RBP26■■□□□ 1.75
PSMD4-203ENST00000427779 AMOTL2Q9Y2J4 779 aa25.99■■□□□ 1.75
PSMD4-203ENST00000427779 ZNF772Q68DY9 489 aaPredicted RBP25.98■■□□□ 1.75
PSMD4-203ENST00000427779 DCCP43146 1447 aa25.97■■□□□ 1.75
PSMD4-203ENST00000427779 SPHKAPQ2M3C7 1700 aa25.97■■□□□ 1.75
PSMD4-203ENST00000427779 PTPRUQ92729 1446 aa25.96■■□□□ 1.75
PSMD4-203ENST00000427779 XRN1Q8IZH2 1706 aaKnown RBP25.95■■□□□ 1.74
PSMD4-203ENST00000427779 SETBP1Q9Y6X0 1596 aa25.95■■□□□ 1.74
PSMD4-203ENST00000427779 NRXN3Q9Y4C0 1643 aa25.94■■□□□ 1.74
PSMD4-203ENST00000427779 BRINP3Q76B58 766 aa25.92■■□□□ 1.74
PSMD4-203ENST00000427779 ITGAEP38570 1179 aa25.91■■□□□ 1.74
PSMD4-203ENST00000427779 ASXL1Q8IXJ9 1541 aa25.89■■□□□ 1.74
PSMD4-203ENST00000427779 ZNF326Q5BKZ1 582 aaKnown RBP25.88■■□□□ 1.73
PSMD4-203ENST00000427779 NHSL1Q5SYE7 1610 aa25.88■■□□□ 1.73
PSMD4-203ENST00000427779 MST1RQ04912 1400 aa25.86■■□□□ 1.73
PSMD4-203ENST00000427779 TRIM52Q96A61 297 aa25.85■■□□□ 1.73
PSMD4-203ENST00000427779 SETD5Q9C0A6 1442 aa25.85■■□□□ 1.73
PSMD4-203ENST00000427779 NUTM2BA6NNL0 878 aaPredicted RBP25.83■■□□□ 1.73
PSMD4-203ENST00000427779 NUTM2EB1AL46 878 aaPredicted RBP25.83■■□□□ 1.73
PSMD4-203ENST00000427779 RXRBP28702 533 aa25.83■■□□□ 1.73
PSMD4-203ENST00000427779 NUTM2AQ8IVF1 878 aaPredicted RBP25.83■■□□□ 1.73
PSMD4-203ENST00000427779 METP08581 1390 aa25.82■■□□□ 1.72
PSMD4-203ENST00000427779 ADGRL3Q9HAR2 1447 aa25.81■■□□□ 1.72
PSMD4-203ENST00000427779 CDK12Q9NYV4 1490 aaPredicted RBP25.81■■□□□ 1.72
PSMD4-203ENST00000427779 KIF1BO60333 1816 aa25.81■■□□□ 1.72
PSMD4-203ENST00000427779 NEXMIFQ5QGS0 1516 aa25.8■■□□□ 1.72
PSMD4-203ENST00000427779 UPF1Q92900 1129 aaKnown RBP eCLIP25.8■■□□□ 1.72
PSMD4-203ENST00000427779 LRRC59Q96AG4 307 aaKnown RBP25.8■■□□□ 1.72
PSMD4-203ENST00000427779 CLTCL1P53675 1640 aa25.8■■□□□ 1.72
PSMD4-203ENST00000427779 NALCNQ8IZF0 1738 aa25.79■■□□□ 1.72
PSMD4-203ENST00000427779 AFF2P51816 1311 aa25.77■■□□□ 1.72
PSMD4-203ENST00000427779 PNPLA6Q8IY17 1366 aa25.71■■□□□ 1.71
PSMD4-203ENST00000427779 PTCH1Q13635 1447 aa25.71■■□□□ 1.71
PSMD4-203ENST00000427779 PPARGC1BQ86YN6 1023 aaKnown RBP25.69■■□□□ 1.7
PSMD4-203ENST00000427779 C8orf37Q96NL8 207 aa25.69■■□□□ 1.7
PSMD4-203ENST00000427779 LAMC1P11047 1609 aa25.69■■□□□ 1.7
PSMD4-203ENST00000427779 C1orf167Q5SNV9 1468 aa25.68■■□□□ 1.7
PSMD4-203ENST00000427779 VGFO15240 615 aaPredicted RBP25.67■■□□□ 1.7
PSMD4-203ENST00000427779 DDX17Q92841 729 aaKnown RBP25.67■■□□□ 1.7
PSMD4-203ENST00000427779 RBM6P78332 1123 aaKnown RBP25.66■■□□□ 1.7
PSMD4-203ENST00000427779 NAIPQ13075 1403 aa25.65■■□□□ 1.7
PSMD4-203ENST00000427779 QTRT2Q9H974 415 aaKnown RBP25.65■■□□□ 1.7
PSMD4-203ENST00000427779 RRBP1Q9P2E9 1410 aaKnown RBP25.64■■□□□ 1.7
PSMD4-203ENST00000427779 RGS12O14924 1447 aa25.63■■□□□ 1.69
PSMD4-203ENST00000427779 PRAG1Q86YV5 1406 aa25.63■■□□□ 1.69
PSMD4-203ENST00000427779 RPGRIP1LQ68CZ1 1315 aa25.62■■□□□ 1.69
PSMD4-203ENST00000427779 ROBO2Q9HCK4 1378 aa25.61■■□□□ 1.69
PSMD4-203ENST00000427779 PPLO60437 1756 aa25.6■■□□□ 1.69
PSMD4-203ENST00000427779 NGLY1Q96IV0 654 aa25.6■■□□□ 1.69
PSMD4-203ENST00000427779 SOS2Q07890 1332 aaPredicted RBP25.6■■□□□ 1.69
PSMD4-203ENST00000427779 ADAMTS2O95450 1211 aa25.59■■□□□ 1.69
PSMD4-203ENST00000427779 HFM1A2PYH4 1435 aa25.59■■□□□ 1.69
PSMD4-203ENST00000427779 ORAI2Q96SN7 254 aa25.56■■□□□ 1.68
PSMD4-203ENST00000427779 COL22A1Q8NFW1 1626 aaPredicted RBP25.55■■□□□ 1.68
PSMD4-203ENST00000427779 SLC4A1APQ9BWU0 796 aaKnown RBP25.53■■□□□ 1.68
PSMD4-203ENST00000427779 CDC42BPGQ6DT37 1551 aa25.52■■□□□ 1.68
PSMD4-203ENST00000427779 USP21Q9UK80 565 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms