RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
POLR2J4-202ENST00000427076 ANO2Q9NQ90 1003 aa13.85□□□□□ -0.19
POLR2J4-202ENST00000427076 ATP6V1DQ9Y5K8 247 aa13.85□□□□□ -0.19
POLR2J4-202ENST00000427076 DHX16O60231 1041 aaKnown RBP13.84□□□□□ -0.19
POLR2J4-202ENST00000427076 ODF2Q5BJF6 829 aa13.84□□□□□ -0.19
POLR2J4-202ENST00000427076 ACBD3Q9H3P7 528 aa13.84□□□□□ -0.19
POLR2J4-202ENST00000427076 ELL2O00472 640 aaPredicted RBP13.84□□□□□ -0.19
POLR2J4-202ENST00000427076 TRIM29Q14134 588 aa13.84□□□□□ -0.19
POLR2J4-202ENST00000427076 ROCK2O75116 1388 aaKnown RBP13.84□□□□□ -0.19
POLR2J4-202ENST00000427076 CBX1P83916 185 aa13.84□□□□□ -0.19
POLR2J4-202ENST00000427076 SYNE3Q6ZMZ3 975 aa13.84□□□□□ -0.19
POLR2J4-202ENST00000427076 CTDP1Q9Y5B0 961 aaPredicted RBP13.84□□□□□ -0.19
POLR2J4-202ENST00000427076 SPC24Q8NBT2 197 aa13.83□□□□□ -0.2
POLR2J4-202ENST00000427076 FAM193AP78312 1265 aa13.83□□□□□ -0.2
POLR2J4-202ENST00000427076 TRIM34Q9BYJ4 488 aa13.83□□□□□ -0.2
POLR2J4-202ENST00000427076 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
POLR2J4-202ENST00000427076 NUTM2FA1L443 756 aa13.82□□□□□ -0.2
POLR2J4-202ENST00000427076 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.82□□□□□ -0.2
POLR2J4-202ENST00000427076 CWC15Q9P013 229 aaKnown RBP13.82□□□□□ -0.2
POLR2J4-202ENST00000427076 CCDC66A2RUB6 948 aa13.82□□□□□ -0.2
POLR2J4-202ENST00000427076 SASS6Q6UVJ0 657 aa13.82□□□□□ -0.2
POLR2J4-202ENST00000427076 VPS37CA5D8V6 355 aaPredicted RBP13.82□□□□□ -0.2
POLR2J4-202ENST00000427076 DCTN1Q14203 1278 aa13.82□□□□□ -0.2
POLR2J4-202ENST00000427076 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
POLR2J4-202ENST00000427076 NGDNQ8NEJ9 315 aaKnown RBP13.82□□□□□ -0.2
POLR2J4-202ENST00000427076 CCDC47Q96A33 483 aaKnown RBP13.81□□□□□ -0.2
POLR2J4-202ENST00000427076 UQCRHLA0A096LP55 91 aa13.81□□□□□ -0.2
POLR2J4-202ENST00000427076 UQCRHP07919 91 aa13.81□□□□□ -0.2
POLR2J4-202ENST00000427076 NGEFQ8N5V2 710 aa13.81□□□□□ -0.2
POLR2J4-202ENST00000427076 AMPHP49418 695 aa13.81□□□□□ -0.2
POLR2J4-202ENST00000427076 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.81□□□□□ -0.2
POLR2J4-202ENST00000427076 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
POLR2J4-202ENST00000427076 AXDND1Q5T1B0 1012 aaPredicted RBP13.8□□□□□ -0.2
POLR2J4-202ENST00000427076 NFKBIBQ15653 356 aa13.8□□□□□ -0.2
POLR2J4-202ENST00000427076 LEKR1Q6ZMV7 388 aa13.8□□□□□ -0.2
POLR2J4-202ENST00000427076 DIAPH3Q9NSV4 1193 aa13.8□□□□□ -0.2
POLR2J4-202ENST00000427076 RSPH4AQ5TD94 716 aa13.79□□□□□ -0.2
POLR2J4-202ENST00000427076 CWC22Q9HCG8 908 aaKnown RBP13.79□□□□□ -0.2
POLR2J4-202ENST00000427076 EVA1CP58658 441 aa13.79□□□□□ -0.2
POLR2J4-202ENST00000427076 ANKRD62A6NC57 917 aa13.78□□□□□ -0.2
POLR2J4-202ENST00000427076 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
POLR2J4-202ENST00000427076 CPLX1O14810 134 aa13.78□□□□□ -0.2
POLR2J4-202ENST00000427076 DYDC1Q8WWB3 177 aa13.78□□□□□ -0.2
POLR2J4-202ENST00000427076 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
POLR2J4-202ENST00000427076 NFXL1Q6ZNB6 911 aa13.78□□□□□ -0.2
POLR2J4-202ENST00000427076 EXOC6Q8TAG9 804 aa13.77□□□□□ -0.2
POLR2J4-202ENST00000427076 CGNQ9P2M7 1197 aaKnown RBP13.77□□□□□ -0.2
POLR2J4-202ENST00000427076 PKD2Q13563 968 aa13.77□□□□□ -0.21
POLR2J4-202ENST00000427076 CCDC43Q96MW1 224 aaKnown RBP13.77□□□□□ -0.21
POLR2J4-202ENST00000427076 ZBTB9Q96C00 473 aa13.77□□□□□ -0.21
POLR2J4-202ENST00000427076 HOOK1Q9UJC3 728 aaKnown RBP13.76□□□□□ -0.21
POLR2J4-202ENST00000427076 CRBNQ96SW2 442 aa13.76□□□□□ -0.21
POLR2J4-202ENST00000427076 EPS15P42566 896 aa13.76□□□□□ -0.21
POLR2J4-202ENST00000427076 FAM177A1Q8N128 213 aaPredicted RBP13.76□□□□□ -0.21
POLR2J4-202ENST00000427076 WRNQ14191 1432 aaPredicted RBP eCLIP13.76□□□□□ -0.21
POLR2J4-202ENST00000427076 NEFHP12036 1026 aa13.75□□□□□ -0.21
POLR2J4-202ENST00000427076 NASPP49321 788 aaPredicted RBP13.75□□□□□ -0.21
POLR2J4-202ENST00000427076 RALBP1Q15311 655 aa13.75□□□□□ -0.21
POLR2J4-202ENST00000427076 NECTIN2Q92692 538 aa13.75□□□□□ -0.21
POLR2J4-202ENST00000427076 ZMYND15Q9H091 742 aa13.75□□□□□ -0.21
POLR2J4-202ENST00000427076 CCAR1Q8IX12 1150 aaKnown RBP13.75□□□□□ -0.21
POLR2J4-202ENST00000427076 NOL10Q9BSC4 688 aaKnown RBP13.75□□□□□ -0.21
POLR2J4-202ENST00000427076 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
POLR2J4-202ENST00000427076 PAXIP1Q6ZW49 1069 aaPredicted RBP13.75□□□□□ -0.21
POLR2J4-202ENST00000427076 MTMR7Q9Y216 660 aa13.74□□□□□ -0.21
POLR2J4-202ENST00000427076 OFD1O75665 1012 aa13.74□□□□□ -0.21
POLR2J4-202ENST00000427076 HDAC5Q9UQL6 1122 aa13.74□□□□□ -0.21
POLR2J4-202ENST00000427076 GIMAP7Q8NHV1 300 aa13.74□□□□□ -0.21
POLR2J4-202ENST00000427076 EIF3AQ14152 1382 aaKnown RBP13.74□□□□□ -0.21
POLR2J4-202ENST00000427076 TAF3Q5VWG9 929 aa13.74□□□□□ -0.21
POLR2J4-202ENST00000427076 CCDC180Q9P1Z9 1646 aa13.74□□□□□ -0.21
POLR2J4-202ENST00000427076 CENPQQ7L2Z9 268 aaPredicted RBP13.74□□□□□ -0.21
POLR2J4-202ENST00000427076 CCDC173Q0VFZ6 552 aa13.73□□□□□ -0.21
POLR2J4-202ENST00000427076 CCDC27Q2M243 656 aa13.73□□□□□ -0.21
POLR2J4-202ENST00000427076 BBXQ8WY36 941 aaPredicted RBP13.73□□□□□ -0.21
POLR2J4-202ENST00000427076 CEP164Q9UPV0 1460 aa13.73□□□□□ -0.21
POLR2J4-202ENST00000427076 LMOD3Q0VAK6 560 aa13.73□□□□□ -0.21
POLR2J4-202ENST00000427076 AMOTL1Q8IY63 956 aa13.73□□□□□ -0.21
POLR2J4-202ENST00000427076 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
POLR2J4-202ENST00000427076 COG6Q9Y2V7 657 aa13.73□□□□□ -0.21
POLR2J4-202ENST00000427076 CCDC39Q9UFE4 941 aa13.73□□□□□ -0.21
POLR2J4-202ENST00000427076 EEA1Q15075 1411 aa13.73□□□□□ -0.21
POLR2J4-202ENST00000427076 BRPF1P55201 1214 aaPredicted RBP13.72□□□□□ -0.21
POLR2J4-202ENST00000427076 DNAJC2Q99543 621 aaKnown RBP13.72□□□□□ -0.21
POLR2J4-202ENST00000427076 SMC3Q9UQE7 1217 aa13.72□□□□□ -0.21
POLR2J4-202ENST00000427076 SMC2O95347 1197 aa13.72□□□□□ -0.21
POLR2J4-202ENST00000427076 ENOX2Q16206 610 aaKnown RBP13.72□□□□□ -0.21
POLR2J4-202ENST00000427076 C1orf141Q5JVX7 400 aa13.72□□□□□ -0.21
POLR2J4-202ENST00000427076 CT47B1P0C2W7 299 aaPredicted RBP13.71□□□□□ -0.21
POLR2J4-202ENST00000427076 PAF1Q8N7H5 531 aa13.71□□□□□ -0.21
POLR2J4-202ENST00000427076 ERCC4Q92889 916 aaPredicted RBP13.71□□□□□ -0.21
POLR2J4-202ENST00000427076 ZKSCAN1P17029 563 aaPredicted RBP13.71□□□□□ -0.21
POLR2J4-202ENST00000427076 FYB1O15117 783 aa13.71□□□□□ -0.21
POLR2J4-202ENST00000427076 CCDC73Q6ZRK6 1079 aa13.71□□□□□ -0.21
POLR2J4-202ENST00000427076 OLFM4Q6UX06 510 aa13.71□□□□□ -0.22
POLR2J4-202ENST00000427076 TERF2IPQ9NYB0 399 aa13.71□□□□□ -0.22
POLR2J4-202ENST00000427076 CHMP5Q9NZZ3 219 aa13.71□□□□□ -0.22
POLR2J4-202ENST00000427076 EIF2S2P20042 333 aaKnown RBP13.7□□□□□ -0.22
POLR2J4-202ENST00000427076 BCCIPQ9P287 314 aaKnown RBP eCLIP13.7□□□□□ -0.22
POLR2J4-202ENST00000427076 CAVIN1Q6NZI2 390 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms