RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 PHF23Q9BUL5 403 aaPredicted RBP15.75■□□□□ 0.11
HDLBP-213ENST00000427007 TMEM131LA2VDJ0 1609 aa15.75■□□□□ 0.11
HDLBP-213ENST00000427007 KCNA6P17658 529 aa15.74■□□□□ 0.11
HDLBP-213ENST00000427007 NWD1Q149M9 1564 aa15.74■□□□□ 0.11
HDLBP-213ENST00000427007 IQGAP3Q86VI3 1631 aa15.72■□□□□ 0.11
HDLBP-213ENST00000427007 ZFYVE9O95405 1425 aa15.72■□□□□ 0.11
HDLBP-213ENST00000427007 ITGAEP38570 1179 aa15.72■□□□□ 0.11
HDLBP-213ENST00000427007 PROSER2Q86WR7 435 aaPredicted RBP15.72■□□□□ 0.11
HDLBP-213ENST00000427007 PPARGC1BQ86YN6 1023 aaKnown RBP15.72■□□□□ 0.11
HDLBP-213ENST00000427007 RIMS2Q9UQ26 1411 aa15.71■□□□□ 0.11
HDLBP-213ENST00000427007 ROBO1Q9Y6N7 1651 aa15.71■□□□□ 0.11
HDLBP-213ENST00000427007 CHGAP10645 457 aaKnown RBP15.71■□□□□ 0.11
HDLBP-213ENST00000427007 ROCK1Q13464 1354 aa15.71■□□□□ 0.11
HDLBP-213ENST00000427007 NKTRP30414 1462 aaKnown RBP15.71■□□□□ 0.1
HDLBP-213ENST00000427007 PPP1R15AO75807 674 aaPredicted RBP15.7■□□□□ 0.1
HDLBP-213ENST00000427007 CHD2O14647 1828 aaKnown RBP15.7■□□□□ 0.1
HDLBP-213ENST00000427007 PLEKHG1Q9ULL1 1385 aa15.69■□□□□ 0.1
HDLBP-213ENST00000427007 FAM135BQ49AJ0 1406 aa15.68■□□□□ 0.1
HDLBP-213ENST00000427007 NUTM2DQ5VT03 806 aaPredicted RBP15.68■□□□□ 0.1
HDLBP-213ENST00000427007 NUP155O75694 1391 aa15.66■□□□□ 0.1
HDLBP-213ENST00000427007 HDGFP51858 240 aaKnown RBP15.66■□□□□ 0.1
HDLBP-213ENST00000427007 MSH6P52701 1360 aa15.65■□□□□ 0.1
HDLBP-213ENST00000427007 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.63■□□□□ 0.09
HDLBP-213ENST00000427007 PHLPP1O60346 1717 aa15.63■□□□□ 0.09
HDLBP-213ENST00000427007 SPHKAPQ2M3C7 1700 aa15.63■□□□□ 0.09
HDLBP-213ENST00000427007 ADAMTS13Q76LX8 1427 aa15.62■□□□□ 0.09
HDLBP-213ENST00000427007 DIP2AQ14689 1571 aa15.62■□□□□ 0.09
HDLBP-213ENST00000427007 RGS17Q9UGC6 210 aaPredicted RBP15.61■□□□□ 0.09
HDLBP-213ENST00000427007 TBX22Q9Y458 520 aa15.61■□□□□ 0.09
HDLBP-213ENST00000427007 SLAIN2Q9P270 581 aa15.6■□□□□ 0.09
HDLBP-213ENST00000427007 TRPM2O94759 1503 aa15.58■□□□□ 0.09
HDLBP-213ENST00000427007 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.58■□□□□ 0.08
HDLBP-213ENST00000427007 C14orf37Q86TY3 774 aa15.58■□□□□ 0.08
HDLBP-213ENST00000427007 NRXN3Q9Y4C0 1643 aa15.57■□□□□ 0.08
HDLBP-213ENST00000427007 PIK3R4Q99570 1358 aa15.56■□□□□ 0.08
HDLBP-213ENST00000427007 CLTCL1P53675 1640 aa15.55■□□□□ 0.08
HDLBP-213ENST00000427007 COL16A1Q07092 1604 aaPredicted RBP15.55■□□□□ 0.08
HDLBP-213ENST00000427007 PTPRUQ92729 1446 aa15.55■□□□□ 0.08
HDLBP-213ENST00000427007 NCOA3Q9Y6Q9 1424 aa15.55■□□□□ 0.08
HDLBP-213ENST00000427007 ZNF326Q5BKZ1 582 aaKnown RBP15.54■□□□□ 0.08
HDLBP-213ENST00000427007 AMOTL2Q9Y2J4 779 aa15.54■□□□□ 0.08
HDLBP-213ENST00000427007 RRBP1Q9P2E9 1410 aaKnown RBP15.53■□□□□ 0.08
HDLBP-213ENST00000427007 XRN1Q8IZH2 1706 aaKnown RBP15.53■□□□□ 0.08
HDLBP-213ENST00000427007 SETBP1Q9Y6X0 1596 aa15.53■□□□□ 0.08
HDLBP-213ENST00000427007 JCADQ9P266 1359 aa15.52■□□□□ 0.08
HDLBP-213ENST00000427007 POTEAQ6S8J7 498 aa15.52■□□□□ 0.08
HDLBP-213ENST00000427007 ATF3P18847 181 aa15.51■□□□□ 0.07
HDLBP-213ENST00000427007 CADPS2Q86UW7 1296 aa15.51■□□□□ 0.07
HDLBP-213ENST00000427007 C19orf44Q9H6X5 657 aa15.51■□□□□ 0.07
HDLBP-213ENST00000427007 KIF1BO60333 1816 aa15.51■□□□□ 0.07
HDLBP-213ENST00000427007 NAIPQ13075 1403 aa15.51■□□□□ 0.07
HDLBP-213ENST00000427007 NEXMIFQ5QGS0 1516 aa15.5■□□□□ 0.07
HDLBP-213ENST00000427007 AHDC1Q5TGY3 1603 aaPredicted RBP15.5■□□□□ 0.07
HDLBP-213ENST00000427007 METP08581 1390 aa15.48■□□□□ 0.07
HDLBP-213ENST00000427007 SHPRHQ149N8 1683 aa15.48■□□□□ 0.07
HDLBP-213ENST00000427007 LRP6O75581 1613 aa15.47■□□□□ 0.07
HDLBP-213ENST00000427007 SETD1AO15047 1707 aaKnown RBP15.47■□□□□ 0.07
HDLBP-213ENST00000427007 NALCNQ8IZF0 1738 aa15.46■□□□□ 0.06
HDLBP-213ENST00000427007 DCCP43146 1447 aa15.45■□□□□ 0.06
HDLBP-213ENST00000427007 BRINP3Q76B58 766 aa15.45■□□□□ 0.06
HDLBP-213ENST00000427007 TRIM52Q96A61 297 aa15.45■□□□□ 0.06
HDLBP-213ENST00000427007 ASXL1Q8IXJ9 1541 aa15.44■□□□□ 0.06
HDLBP-213ENST00000427007 SPATA31A6Q5VVP1 1343 aa15.43■□□□□ 0.06
HDLBP-213ENST00000427007 MST1RQ04912 1400 aa15.43■□□□□ 0.06
HDLBP-213ENST00000427007 NHSL1Q5SYE7 1610 aa15.43■□□□□ 0.06
HDLBP-213ENST00000427007 MEX3CQ5U5Q3 659 aaKnown RBP15.43■□□□□ 0.06
HDLBP-213ENST00000427007 HFM1A2PYH4 1435 aa15.43■□□□□ 0.06
HDLBP-213ENST00000427007 ADGRL3Q9HAR2 1447 aa15.41■□□□□ 0.06
HDLBP-213ENST00000427007 PPLO60437 1756 aa15.4■□□□□ 0.06
HDLBP-213ENST00000427007 SLC4A1APQ9BWU0 796 aaKnown RBP15.4■□□□□ 0.06
HDLBP-213ENST00000427007 NUTM2BA6NNL0 878 aaPredicted RBP15.39■□□□□ 0.05
HDLBP-213ENST00000427007 NUTM2EB1AL46 878 aaPredicted RBP15.39■□□□□ 0.05
HDLBP-213ENST00000427007 NUTM2AQ8IVF1 878 aaPredicted RBP15.39■□□□□ 0.05
HDLBP-213ENST00000427007 DDX17Q92841 729 aaKnown RBP15.38■□□□□ 0.05
HDLBP-213ENST00000427007 VGFO15240 615 aaPredicted RBP15.37■□□□□ 0.05
HDLBP-213ENST00000427007 SETD5Q9C0A6 1442 aa15.36■□□□□ 0.05
HDLBP-213ENST00000427007 FOXD1Q16676 465 aa15.36■□□□□ 0.05
HDLBP-213ENST00000427007 ZNF772Q68DY9 489 aaPredicted RBP15.36■□□□□ 0.05
HDLBP-213ENST00000427007 PTCH1Q13635 1447 aa15.35■□□□□ 0.05
HDLBP-213ENST00000427007 ROBO2Q9HCK4 1378 aa15.35■□□□□ 0.05
HDLBP-213ENST00000427007 C1orf167Q5SNV9 1468 aa15.33■□□□□ 0.05
HDLBP-213ENST00000427007 LRRC59Q96AG4 307 aaKnown RBP15.33■□□□□ 0.04
HDLBP-213ENST00000427007 RPGRIP1LQ68CZ1 1315 aa15.33■□□□□ 0.04
HDLBP-213ENST00000427007 AFF2P51816 1311 aa15.31■□□□□ 0.04
HDLBP-213ENST00000427007 PNPLA6Q8IY17 1366 aa15.31■□□□□ 0.04
HDLBP-213ENST00000427007 IFT172Q9UG01 1749 aa15.31■□□□□ 0.04
HDLBP-213ENST00000427007 CCDC144AA2RUR9 1427 aa15.3■□□□□ 0.04
HDLBP-213ENST00000427007 LAMC1P11047 1609 aa15.3■□□□□ 0.04
HDLBP-213ENST00000427007 PRAG1Q86YV5 1406 aa15.3■□□□□ 0.04
HDLBP-213ENST00000427007 ORAI2Q96SN7 254 aa15.3■□□□□ 0.04
HDLBP-213ENST00000427007 RXRBP28702 533 aa15.29■□□□□ 0.04
HDLBP-213ENST00000427007 RGL3Q3MIN7 710 aa15.29■□□□□ 0.04
HDLBP-213ENST00000427007 C8orf37Q96NL8 207 aa15.29■□□□□ 0.04
HDLBP-213ENST00000427007 ADGRF5Q8IZF2 1346 aa15.28■□□□□ 0.04
HDLBP-213ENST00000427007 MPHOSPH9Q99550 1183 aa15.27■□□□□ 0.04
HDLBP-213ENST00000427007 CDC42BPGQ6DT37 1551 aa15.26■□□□□ 0.03
HDLBP-213ENST00000427007 SPATA31E1Q6ZUB1 1445 aa15.26■□□□□ 0.03
HDLBP-213ENST00000427007 ADAMTS2O95450 1211 aa15.25■□□□□ 0.03
HDLBP-213ENST00000427007 UPF1Q92900 1129 aaKnown RBP eCLIP15.25■□□□□ 0.03
HDLBP-213ENST00000427007 STK26Q9P289 416 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms