RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 RAPGEF4Q8WZA2 1011 aa12.64□□□□□ -0.39
SP1-202ENST00000426431 ISY1Q9ULR0 285 aaKnown RBP12.64□□□□□ -0.39
SP1-202ENST00000426431 GNAI1P63096 354 aa12.64□□□□□ -0.39
SP1-202ENST00000426431 SLC4A10Q6U841 1118 aa12.64□□□□□ -0.39
SP1-202ENST00000426431 RUNDC1Q96C34 613 aa12.64□□□□□ -0.39
SP1-202ENST00000426431 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
SP1-202ENST00000426431 PPP6R1Q9UPN7 881 aa12.63□□□□□ -0.39
SP1-202ENST00000426431 MAP3K1Q13233 1512 aa12.63□□□□□ -0.39
SP1-202ENST00000426431 ZNF644Q9H582 1327 aaPredicted RBP12.63□□□□□ -0.39
SP1-202ENST00000426431 DAPK1P53355 1430 aa12.63□□□□□ -0.39
SP1-202ENST00000426431 CHAF1AQ13111 956 aaPredicted RBP12.63□□□□□ -0.39
SP1-202ENST00000426431 KIF16BQ96L93 1317 aa12.63□□□□□ -0.39
SP1-202ENST00000426431 HSP90AB4PQ58FF6 505 aa12.63□□□□□ -0.39
SP1-202ENST00000426431 CENPQQ7L2Z9 268 aaPredicted RBP12.62□□□□□ -0.39
SP1-202ENST00000426431 AFAP1Q8N556 730 aa12.62□□□□□ -0.39
SP1-202ENST00000426431 NUTM2FA1L443 756 aa12.62□□□□□ -0.39
SP1-202ENST00000426431 MEX3CQ5U5Q3 659 aaKnown RBP12.62□□□□□ -0.39
SP1-202ENST00000426431 DDX19BQ9UMR2 479 aa12.62□□□□□ -0.39
SP1-202ENST00000426431 SMG6Q86US8 1419 aaKnown RBP12.62□□□□□ -0.39
SP1-202ENST00000426431 DNTTIP2Q5QJE6 756 aaKnown RBP12.62□□□□□ -0.39
SP1-202ENST00000426431 TRIM6-TRIM34B2RNG4 842 aa12.61□□□□□ -0.39
SP1-202ENST00000426431 TPM4P67936 248 aa12.61□□□□□ -0.39
SP1-202ENST00000426431 TXNDC2Q86VQ3 553 aa12.61□□□□□ -0.39
SP1-202ENST00000426431 ST18O60284 1047 aa12.61□□□□□ -0.39
SP1-202ENST00000426431 AMOTL1Q8IY63 956 aa12.61□□□□□ -0.39
SP1-202ENST00000426431 CCDC146Q8IYE0 955 aa12.61□□□□□ -0.39
SP1-202ENST00000426431 RUFY2Q8WXA3 655 aa12.61□□□□□ -0.39
SP1-202ENST00000426431 FRAT2O75474 233 aaPredicted RBP12.61□□□□□ -0.39
SP1-202ENST00000426431 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
SP1-202ENST00000426431 CCDC7Q96M83 1385 aa12.61□□□□□ -0.39
SP1-202ENST00000426431 GRIN2AQ12879 1464 aa12.6□□□□□ -0.39
SP1-202ENST00000426431 CCDC141Q6ZP82 1450 aa12.6□□□□□ -0.39
SP1-202ENST00000426431 KIF14Q15058 1648 aa12.6□□□□□ -0.39
SP1-202ENST00000426431 NOL10Q9BSC4 688 aaKnown RBP12.6□□□□□ -0.39
SP1-202ENST00000426431 BRD4O60885 1362 aaPredicted RBP12.6□□□□□ -0.39
SP1-202ENST00000426431 APBB1O00213 710 aa12.6□□□□□ -0.39
SP1-202ENST00000426431 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
SP1-202ENST00000426431 ANKLE2Q86XL3 938 aa12.59□□□□□ -0.39
SP1-202ENST00000426431 KIAA2012Q0VF49 1180 aa12.57□□□□□ -0.4
SP1-202ENST00000426431 C9orf78Q9NZ63 289 aaPredicted RBP12.57□□□□□ -0.4
SP1-202ENST00000426431 ATAD2Q6PL18 1390 aa12.57□□□□□ -0.4
SP1-202ENST00000426431 ATP6V1DQ9Y5K8 247 aa12.56□□□□□ -0.4
SP1-202ENST00000426431 CPLX2Q6PUV4 134 aaKnown RBP12.56□□□□□ -0.4
SP1-202ENST00000426431 RIPK4P57078 832 aa12.56□□□□□ -0.4
SP1-202ENST00000426431 PROSER2Q86WR7 435 aaPredicted RBP12.56□□□□□ -0.4
SP1-202ENST00000426431 PLCB2Q00722 1185 aa12.55□□□□□ -0.4
SP1-202ENST00000426431 PHF14O94880 888 aa12.55□□□□□ -0.4
SP1-202ENST00000426431 CD109Q6YHK3 1445 aa12.55□□□□□ -0.4
SP1-202ENST00000426431 REC8O95072 547 aa12.55□□□□□ -0.4
SP1-202ENST00000426431 PLEKHO1Q53GL0 409 aaPredicted RBP12.55□□□□□ -0.4
SP1-202ENST00000426431 NLRP6P59044 892 aa12.54□□□□□ -0.4
SP1-202ENST00000426431 PNISRQ8TF01 805 aaKnown RBP12.54□□□□□ -0.4
SP1-202ENST00000426431 SYNE3Q6ZMZ3 975 aa12.53□□□□□ -0.4
SP1-202ENST00000426431 BIVM-ERCC5R4GMW8 1640 aa12.53□□□□□ -0.4
SP1-202ENST00000426431 CLUAP1Q96AJ1 413 aa12.53□□□□□ -0.4
SP1-202ENST00000426431 KIF7Q2M1P5 1343 aa12.53□□□□□ -0.4
SP1-202ENST00000426431 APAF1O14727 1248 aa12.52□□□□□ -0.41
SP1-202ENST00000426431 DZIP1LQ8IYY4 767 aaKnown RBP12.52□□□□□ -0.41
SP1-202ENST00000426431 CT47B1P0C2W7 299 aaPredicted RBP12.52□□□□□ -0.41
SP1-202ENST00000426431 PLB1Q6P1J6 1458 aa12.52□□□□□ -0.41
SP1-202ENST00000426431 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.41
SP1-202ENST00000426431 TSPYL4Q9UJ04 414 aa12.52□□□□□ -0.41
SP1-202ENST00000426431 DIAPH3Q9NSV4 1193 aa12.51□□□□□ -0.41
SP1-202ENST00000426431 RNF20Q5VTR2 975 aa12.51□□□□□ -0.41
SP1-202ENST00000426431 G3BP1Q13283 466 aaKnown RBP eCLIP12.51□□□□□ -0.417e-7■□□□□ 10.1
SP1-202ENST00000426431 TULP1O00294 542 aaPredicted RBP12.51□□□□□ -0.41
SP1-202ENST00000426431 AKAP17AQ02040 695 aaKnown RBP12.51□□□□□ -0.41
SP1-202ENST00000426431 ERC2O15083 957 aa12.51□□□□□ -0.41
SP1-202ENST00000426431 ZKSCAN1P17029 563 aaPredicted RBP12.51□□□□□ -0.41
SP1-202ENST00000426431 THOC2Q8NI27 1593 aaKnown RBP12.51□□□□□ -0.41
SP1-202ENST00000426431 RRP7AQ9Y3A4 280 aaKnown RBP12.51□□□□□ -0.41
SP1-202ENST00000426431 NLRP2Q9NX02 1062 aa12.51□□□□□ -0.41
SP1-202ENST00000426431 TAOK2Q9UL54 1235 aa12.5□□□□□ -0.41
SP1-202ENST00000426431 DRC7Q8IY82 874 aa12.5□□□□□ -0.41
SP1-202ENST00000426431 MSNP26038 577 aaKnown RBP12.5□□□□□ -0.41
SP1-202ENST00000426431 MFAP1P55081 439 aaKnown RBP12.5□□□□□ -0.41
SP1-202ENST00000426431 ABTB2Q8N961 1025 aa12.5□□□□□ -0.41
SP1-202ENST00000426431 IFIT2P09913 472 aaKnown RBP12.5□□□□□ -0.41
SP1-202ENST00000426431 TRIM34Q9BYJ4 488 aa12.5□□□□□ -0.41
SP1-202ENST00000426431 ADGRL1O94910 1474 aa12.49□□□□□ -0.41
SP1-202ENST00000426431 ERBINQ96RT1 1412 aa12.49□□□□□ -0.41
SP1-202ENST00000426431 RTEL1-TNFRSF6BF6WH68 1400 aa12.49□□□□□ -0.41
SP1-202ENST00000426431 AKNAQ7Z591 1439 aa12.49□□□□□ -0.41
SP1-202ENST00000426431 FKBP5Q13451 457 aaPredicted RBP12.49□□□□□ -0.41
SP1-202ENST00000426431 CFAP70Q5T0N1 1121 aa12.49□□□□□ -0.41
SP1-202ENST00000426431 CCDC30Q5VVM6 783 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 NINLQ9Y2I6 1382 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 CLSTN1O94985 981 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
SP1-202ENST00000426431 FAM161AQ3B820 660 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 TPRNQ4KMQ1 711 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 TOMM22Q9NS69 142 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 TEX14Q8IWB6 1497 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 GNAI3P08754 354 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 ESCO1Q5FWF5 840 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 ANKRD45Q5TZF3 282 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 VPS37DQ86XT2 251 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 PRAM1Q96QH2 718 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
SP1-202ENST00000426431 EIF2S2P20042 333 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms