RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 MYO5BQ9ULV0 1848 aa23.26■■□□□ 1.31
ATG4B-209ENST00000425239 PROSER2Q86WR7 435 aaPredicted RBP23.25■■□□□ 1.31
ATG4B-209ENST00000425239 TMEM131LA2VDJ0 1609 aa23.25■■□□□ 1.31
ATG4B-209ENST00000425239 UNC13BO14795 1591 aa23.23■■□□□ 1.31
ATG4B-209ENST00000425239 PHF23Q9BUL5 403 aaPredicted RBP23.23■■□□□ 1.31
ATG4B-209ENST00000425239 PLEKHG1Q9ULL1 1385 aa23.23■■□□□ 1.31
ATG4B-209ENST00000425239 NKTRP30414 1462 aaKnown RBP23.22■■□□□ 1.31
ATG4B-209ENST00000425239 GCC2Q8IWJ2 1684 aa23.21■■□□□ 1.31
ATG4B-209ENST00000425239 CHD2O14647 1828 aaKnown RBP23.21■■□□□ 1.31
ATG4B-209ENST00000425239 RIMS2Q9UQ26 1411 aa23.2■■□□□ 1.3
ATG4B-209ENST00000425239 ROCK1Q13464 1354 aa23.2■■□□□ 1.3
ATG4B-209ENST00000425239 E9PCH4 1651 aa23.19■■□□□ 1.3
ATG4B-209ENST00000425239 ROBO1Q9Y6N7 1651 aa23.19■■□□□ 1.3
ATG4B-209ENST00000425239 TBX22Q9Y458 520 aa23.18■■□□□ 1.3
ATG4B-209ENST00000425239 ADAMTS13Q76LX8 1427 aa23.15■■□□□ 1.3
ATG4B-209ENST00000425239 IQGAP3Q86VI3 1631 aa23.15■■□□□ 1.3
ATG4B-209ENST00000425239 HDGFP51858 240 aaKnown RBP23.14■■□□□ 1.29
ATG4B-209ENST00000425239 SLAIN2Q9P270 581 aa23.14■■□□□ 1.29
ATG4B-209ENST00000425239 BCANQ96GW7 911 aa23.13■■□□□ 1.29
ATG4B-209ENST00000425239 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.11■■□□□ 1.29
ATG4B-209ENST00000425239 MSH6P52701 1360 aa23.11■■□□□ 1.29
ATG4B-209ENST00000425239 NCOA3Q9Y6Q9 1424 aa23.1■■□□□ 1.29
ATG4B-209ENST00000425239 NUTM2DQ5VT03 806 aaPredicted RBP23.09■■□□□ 1.29
ATG4B-209ENST00000425239 POTEAQ6S8J7 498 aa23.09■■□□□ 1.29
ATG4B-209ENST00000425239 PPP1R15AO75807 674 aaPredicted RBP23.08■■□□□ 1.29
ATG4B-209ENST00000425239 NUP155O75694 1391 aa23.08■■□□□ 1.29
ATG4B-209ENST00000425239 CHGAP10645 457 aaKnown RBP23.06■■□□□ 1.28
ATG4B-209ENST00000425239 PIK3R4Q99570 1358 aa23.05■■□□□ 1.28
ATG4B-209ENST00000425239 PTPRUQ92729 1446 aa23.04■■□□□ 1.28
ATG4B-209ENST00000425239 DIP2AQ14689 1571 aa23.03■■□□□ 1.28
ATG4B-209ENST00000425239 PHLPP1O60346 1717 aa23.02■■□□□ 1.28
ATG4B-209ENST00000425239 COL16A1Q07092 1604 aaPredicted RBP23.01■■□□□ 1.27
ATG4B-209ENST00000425239 ITGAEP38570 1179 aa23.01■■□□□ 1.27
ATG4B-209ENST00000425239 C19orf44Q9H6X5 657 aa23.01■■□□□ 1.27
ATG4B-209ENST00000425239 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.01■■□□□ 1.27
ATG4B-209ENST00000425239 PPARGC1BQ86YN6 1023 aaKnown RBP23■■□□□ 1.27
ATG4B-209ENST00000425239 JCADQ9P266 1359 aa23■■□□□ 1.27
ATG4B-209ENST00000425239 AMOTL2Q9Y2J4 779 aa22.99■■□□□ 1.27
ATG4B-209ENST00000425239 NRXN3Q9Y4C0 1643 aa22.99■■□□□ 1.27
ATG4B-209ENST00000425239 CADPS2Q86UW7 1296 aa22.96■■□□□ 1.27
ATG4B-209ENST00000425239 TRPM2O94759 1503 aa22.96■■□□□ 1.27
ATG4B-209ENST00000425239 SPHKAPQ2M3C7 1700 aa22.94■■□□□ 1.26
ATG4B-209ENST00000425239 SETBP1Q9Y6X0 1596 aa22.94■■□□□ 1.26
ATG4B-209ENST00000425239 AHDC1Q5TGY3 1603 aaPredicted RBP22.93■■□□□ 1.26
ATG4B-209ENST00000425239 LRP6O75581 1613 aa22.93■■□□□ 1.26
ATG4B-209ENST00000425239 XRN1Q8IZH2 1706 aaKnown RBP22.92■■□□□ 1.26
ATG4B-209ENST00000425239 METP08581 1390 aa22.91■■□□□ 1.26
ATG4B-209ENST00000425239 ATF3P18847 181 aa22.91■■□□□ 1.26
ATG4B-209ENST00000425239 BRINP3Q76B58 766 aa22.91■■□□□ 1.26
ATG4B-209ENST00000425239 C14orf37Q86TY3 774 aa22.91■■□□□ 1.26
ATG4B-209ENST00000425239 SPATA31A6Q5VVP1 1343 aa22.89■■□□□ 1.26
ATG4B-209ENST00000425239 RRBP1Q9P2E9 1410 aaKnown RBP22.89■■□□□ 1.25
ATG4B-209ENST00000425239 DCCP43146 1447 aa22.88■■□□□ 1.25
ATG4B-209ENST00000425239 NAIPQ13075 1403 aa22.88■■□□□ 1.25
ATG4B-209ENST00000425239 CLTCL1P53675 1640 aa22.87■■□□□ 1.25
ATG4B-209ENST00000425239 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
ATG4B-209ENST00000425239 SHPRHQ149N8 1683 aa22.87■■□□□ 1.25
ATG4B-209ENST00000425239 MST1RQ04912 1400 aa22.84■■□□□ 1.25
ATG4B-209ENST00000425239 ZNF326Q5BKZ1 582 aaKnown RBP22.84■■□□□ 1.25
ATG4B-209ENST00000425239 SETD1AO15047 1707 aaKnown RBP22.81■■□□□ 1.24
ATG4B-209ENST00000425239 ASXL1Q8IXJ9 1541 aa22.81■■□□□ 1.24
ATG4B-209ENST00000425239 SETD5Q9C0A6 1442 aa22.8■■□□□ 1.24
ATG4B-209ENST00000425239 NHSL1Q5SYE7 1610 aa22.79■■□□□ 1.24
ATG4B-209ENST00000425239 ADGRL3Q9HAR2 1447 aa22.77■■□□□ 1.24
ATG4B-209ENST00000425239 KIF1BO60333 1816 aa22.77■■□□□ 1.24
ATG4B-209ENST00000425239 ZNF772Q68DY9 489 aaPredicted RBP22.76■■□□□ 1.23
ATG4B-209ENST00000425239 NALCNQ8IZF0 1738 aa22.75■■□□□ 1.23
ATG4B-209ENST00000425239 DDX17Q92841 729 aaKnown RBP22.74■■□□□ 1.23
ATG4B-209ENST00000425239 HFM1A2PYH4 1435 aa22.74■■□□□ 1.23
ATG4B-209ENST00000425239 MEX3CQ5U5Q3 659 aaKnown RBP22.72■■□□□ 1.23
ATG4B-209ENST00000425239 LRRC59Q96AG4 307 aaKnown RBP22.72■■□□□ 1.23
ATG4B-209ENST00000425239 PRAG1Q86YV5 1406 aa22.72■■□□□ 1.23
ATG4B-209ENST00000425239 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
ATG4B-209ENST00000425239 ROBO2Q9HCK4 1378 aa22.71■■□□□ 1.23
ATG4B-209ENST00000425239 NUTM2BA6NNL0 878 aaPredicted RBP22.7■■□□□ 1.22
ATG4B-209ENST00000425239 NUTM2EB1AL46 878 aaPredicted RBP22.7■■□□□ 1.22
ATG4B-209ENST00000425239 NUTM2AQ8IVF1 878 aaPredicted RBP22.7■■□□□ 1.22
ATG4B-209ENST00000425239 PTCH1Q13635 1447 aa22.7■■□□□ 1.22
ATG4B-209ENST00000425239 LAMC1P11047 1609 aa22.69■■□□□ 1.22
ATG4B-209ENST00000425239 C1orf167Q5SNV9 1468 aa22.69■■□□□ 1.22
ATG4B-209ENST00000425239 RPGRIP1LQ68CZ1 1315 aa22.69■■□□□ 1.22
ATG4B-209ENST00000425239 UPF1Q92900 1129 aaKnown RBP eCLIP22.69■■□□□ 1.22
ATG4B-209ENST00000425239 PNPLA6Q8IY17 1366 aa22.68■■□□□ 1.22
ATG4B-209ENST00000425239 TRIM52Q96A61 297 aa22.67■■□□□ 1.22
ATG4B-209ENST00000425239 AFF2P51816 1311 aa22.66■■□□□ 1.22
ATG4B-209ENST00000425239 RXRBP28702 533 aa22.66■■□□□ 1.22
ATG4B-209ENST00000425239 SLC4A1APQ9BWU0 796 aaKnown RBP22.66■■□□□ 1.22
ATG4B-209ENST00000425239 ORAI2Q96SN7 254 aa22.65■■□□□ 1.22
ATG4B-209ENST00000425239 PPLO60437 1756 aa22.65■■□□□ 1.22
ATG4B-209ENST00000425239 SOS2Q07890 1332 aaPredicted RBP22.64■■□□□ 1.22
ATG4B-209ENST00000425239 CDK12Q9NYV4 1490 aaPredicted RBP22.64■■□□□ 1.21
ATG4B-209ENST00000425239 FOXD1Q16676 465 aa22.61■■□□□ 1.21
ATG4B-209ENST00000425239 ADGRF5Q8IZF2 1346 aa22.58■■□□□ 1.21
ATG4B-209ENST00000425239 QTRT2Q9H974 415 aaKnown RBP22.58■■□□□ 1.21
ATG4B-209ENST00000425239 SPATA31E1Q6ZUB1 1445 aa22.57■■□□□ 1.2
ATG4B-209ENST00000425239 C8orf37Q96NL8 207 aa22.57■■□□□ 1.2
ATG4B-209ENST00000425239 RBM6P78332 1123 aaKnown RBP22.54■■□□□ 1.2
ATG4B-209ENST00000425239 RGS12O14924 1447 aa22.53■■□□□ 1.2
ATG4B-209ENST00000425239 TECPR2O15040 1411 aa22.52■■□□□ 1.2
ATG4B-209ENST00000425239 ADAMTS2O95450 1211 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms