RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
DENND3-202ENST00000424248 GORABQ5T7V8 394 aa17.3■□□□□ 0.36
DENND3-202ENST00000424248 VSIG10Q8N0Z9 540 aa17.3■□□□□ 0.36
DENND3-202ENST00000424248 MRE11P49959 708 aa17.29■□□□□ 0.36
DENND3-202ENST00000424248 GNL2Q13823 731 aaKnown RBP17.29■□□□□ 0.36
DENND3-202ENST00000424248 PRG4Q92954 1404 aaPredicted RBP17.29■□□□□ 0.36
DENND3-202ENST00000424248 LTV1Q96GA3 475 aaPredicted RBP17.29■□□□□ 0.36
DENND3-202ENST00000424248 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
DENND3-202ENST00000424248 API5Q9BZZ5 524 aaKnown RBP17.28■□□□□ 0.36
DENND3-202ENST00000424248 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
DENND3-202ENST00000424248 ZNF330Q9Y3S2 320 aaPredicted RBP17.28■□□□□ 0.36
DENND3-202ENST00000424248 NESP48681 1621 aa17.27■□□□□ 0.36
DENND3-202ENST00000424248 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.36
DENND3-202ENST00000424248 BCL2L13Q9BXK5 485 aa17.27■□□□□ 0.36
DENND3-202ENST00000424248 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
DENND3-202ENST00000424248 HECW1Q76N89 1606 aa17.27■□□□□ 0.36
DENND3-202ENST00000424248 BACH2Q9BYV9 841 aa17.27■□□□□ 0.35
DENND3-202ENST00000424248 TAF7LQ5H9L4 462 aa17.26■□□□□ 0.35
DENND3-202ENST00000424248 C9orf84Q5VXU9 1444 aa17.26■□□□□ 0.35
DENND3-202ENST00000424248 TPM4P67936 248 aa17.25■□□□□ 0.35
DENND3-202ENST00000424248 DZIP1LQ8IYY4 767 aaKnown RBP17.25■□□□□ 0.35
DENND3-202ENST00000424248 FAM43AQ8N2R8 423 aa17.25■□□□□ 0.35
DENND3-202ENST00000424248 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
DENND3-202ENST00000424248 ELL2O00472 640 aaPredicted RBP17.25■□□□□ 0.35
DENND3-202ENST00000424248 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
DENND3-202ENST00000424248 RIPK4P57078 832 aa17.24■□□□□ 0.35
DENND3-202ENST00000424248 ISY1Q9ULR0 285 aaKnown RBP17.24■□□□□ 0.35
DENND3-202ENST00000424248 TEFQ10587 303 aa17.24■□□□□ 0.35
DENND3-202ENST00000424248 CHMP3Q9Y3E7 222 aa17.24■□□□□ 0.35
DENND3-202ENST00000424248 C1orf141Q5JVX7 400 aa17.24■□□□□ 0.35
DENND3-202ENST00000424248 ANKRD45Q5TZF3 282 aa17.24■□□□□ 0.35
DENND3-202ENST00000424248 ROCK1Q13464 1354 aa17.24■□□□□ 0.35
DENND3-202ENST00000424248 NUCB2P80303 420 aa17.23■□□□□ 0.35
DENND3-202ENST00000424248 AFAP1Q8N556 730 aa17.23■□□□□ 0.35
DENND3-202ENST00000424248 FOXD4L1Q9NU39 408 aa17.23■□□□□ 0.35
DENND3-202ENST00000424248 MAP7D2Q96T17 732 aa17.23■□□□□ 0.35
DENND3-202ENST00000424248 KIF3AQ9Y496 699 aa17.23■□□□□ 0.35
DENND3-202ENST00000424248 REC8O95072 547 aa17.22■□□□□ 0.35
DENND3-202ENST00000424248 FAM69CQ0P6D2 419 aa17.22■□□□□ 0.35
DENND3-202ENST00000424248 GNAI1P63096 354 aa17.22■□□□□ 0.35
DENND3-202ENST00000424248 MTERF4Q7Z6M4 381 aaKnown RBP17.22■□□□□ 0.35
DENND3-202ENST00000424248 CCDC34Q96HJ3 373 aa17.22■□□□□ 0.35
DENND3-202ENST00000424248 C22orf23Q9BZE7 217 aa17.21■□□□□ 0.35
DENND3-202ENST00000424248 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.35
DENND3-202ENST00000424248 CHMP4CQ96CF2 233 aa17.21■□□□□ 0.35
DENND3-202ENST00000424248 SCAPERQ9BY12 1400 aa17.2■□□□□ 0.34
DENND3-202ENST00000424248 KIAA0586Q9BVV6 1533 aa17.19■□□□□ 0.34
DENND3-202ENST00000424248 PNISRQ8TF01 805 aaKnown RBP17.19■□□□□ 0.34
DENND3-202ENST00000424248 SUPT6HQ7KZ85 1726 aaKnown RBP17.19■□□□□ 0.34
DENND3-202ENST00000424248 WDR97A6NE52 1622 aa17.19■□□□□ 0.34
DENND3-202ENST00000424248 PDE3AQ14432 1141 aa17.18■□□□□ 0.34
DENND3-202ENST00000424248 ARID3AQ99856 593 aa17.18■□□□□ 0.34
DENND3-202ENST00000424248 DAPK1P53355 1430 aa17.18■□□□□ 0.34
DENND3-202ENST00000424248 AKNAQ7Z591 1439 aa17.17■□□□□ 0.34
DENND3-202ENST00000424248 NEXNQ0ZGT2 675 aa17.17■□□□□ 0.34
DENND3-202ENST00000424248 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
DENND3-202ENST00000424248 NINLQ9Y2I6 1382 aa17.17■□□□□ 0.34
DENND3-202ENST00000424248 CFAP70Q5T0N1 1121 aa17.16■□□□□ 0.34
DENND3-202ENST00000424248 HSP90B1P14625 803 aaKnown RBP17.16■□□□□ 0.34
DENND3-202ENST00000424248 TPM2P07951 284 aa17.15■□□□□ 0.34
DENND3-202ENST00000424248 ADAMTS8Q9UP79 889 aa17.15■□□□□ 0.34
DENND3-202ENST00000424248 MAP3K1Q13233 1512 aa17.15■□□□□ 0.34
DENND3-202ENST00000424248 TNNT3P45378 269 aaPredicted RBP17.15■□□□□ 0.34
DENND3-202ENST00000424248 RUFY2Q8WXA3 655 aa17.14■□□□□ 0.33
DENND3-202ENST00000424248 EPRSP07814 1512 aaKnown RBP17.14■□□□□ 0.33
DENND3-202ENST00000424248 NBPF8Q3BBV2 869 aa17.14■□□□□ 0.33
DENND3-202ENST00000424248 TRAK2O60296 914 aa17.13■□□□□ 0.33
DENND3-202ENST00000424248 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
DENND3-202ENST00000424248 PPP2R1AP30153 589 aa17.13■□□□□ 0.33
DENND3-202ENST00000424248 LRRFIP1Q32MZ4 808 aaKnown RBP17.13■□□□□ 0.33
DENND3-202ENST00000424248 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
DENND3-202ENST00000424248 RILPL2Q969X0 211 aa17.13■□□□□ 0.33
DENND3-202ENST00000424248 GGNBP2Q9H3C7 697 aa17.13■□□□□ 0.33
DENND3-202ENST00000424248 BRPF3Q9ULD4 1205 aa17.13■□□□□ 0.33
DENND3-202ENST00000424248 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
DENND3-202ENST00000424248 DDX58O95786 925 aaKnown RBP17.12■□□□□ 0.33
DENND3-202ENST00000424248 MTHFSP49914 203 aa17.12■□□□□ 0.33
DENND3-202ENST00000424248 TMEM132EQ6IEE7 984 aa17.12■□□□□ 0.33
DENND3-202ENST00000424248 CCDC9Q9Y3X0 531 aaKnown RBP17.12■□□□□ 0.33
DENND3-202ENST00000424248 NAIPQ13075 1403 aa17.12■□□□□ 0.33
DENND3-202ENST00000424248 IL27Q8NEV9 243 aa17.12■□□□□ 0.33
DENND3-202ENST00000424248 SLC52A1Q9NWF4 448 aa17.12■□□□□ 0.33
DENND3-202ENST00000424248 PSME1Q06323 249 aa17.12■□□□□ 0.33
DENND3-202ENST00000424248 CABP2Q9NPB3 220 aa17.12■□□□□ 0.33
DENND3-202ENST00000424248 MSH5O43196 834 aa17.11■□□□□ 0.33
DENND3-202ENST00000424248 C9orf78Q9NZ63 289 aaPredicted RBP17.11■□□□□ 0.33
DENND3-202ENST00000424248 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
DENND3-202ENST00000424248 NBPF1Q3BBV0 1214 aa17.11■□□□□ 0.33
DENND3-202ENST00000424248 INTS3Q68E01 1043 aaKnown RBP17.11■□□□□ 0.33
DENND3-202ENST00000424248 TULP1O00294 542 aaPredicted RBP17.1■□□□□ 0.33
DENND3-202ENST00000424248 CDCA7LQ96GN5 454 aa17.1■□□□□ 0.33
DENND3-202ENST00000424248 DIAPH3Q9NSV4 1193 aa17.1■□□□□ 0.33
DENND3-202ENST00000424248 TCP11L2Q8N4U5 519 aa17.1■□□□□ 0.33
DENND3-202ENST00000424248 NASPP49321 788 aaPredicted RBP17.1■□□□□ 0.33
DENND3-202ENST00000424248 HSP90AB4PQ58FF6 505 aa17.1■□□□□ 0.33
DENND3-202ENST00000424248 CUL7Q14999 1698 aa17.1■□□□□ 0.33
DENND3-202ENST00000424248 FAM13BQ9NYF5 915 aa17.09■□□□□ 0.33
DENND3-202ENST00000424248 FKBP5Q13451 457 aaPredicted RBP17.09■□□□□ 0.33
DENND3-202ENST00000424248 NOL8Q76FK4 1167 aaKnown RBP17.09■□□□□ 0.33
DENND3-202ENST00000424248 RPGRIP1LQ68CZ1 1315 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms