RNA–Protein interactions for RNA: ENST00000424022.2

LBR-204, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-204ENST00000424022 PNMA3Q9UL41 463 aa11.61□□□□□ -0.55
LBR-204ENST00000424022 VPS9D1Q9Y2B5 631 aa11.61□□□□□ -0.55
LBR-204ENST00000424022 SSTR3P32745 418 aaPredicted RBP11.6□□□□□ -0.55
LBR-204ENST00000424022 NUDT18Q6ZVK8 323 aa11.6□□□□□ -0.55
LBR-204ENST00000424022 FAM217BQ9NTX9 383 aaPredicted RBP11.6□□□□□ -0.55
LBR-204ENST00000424022 PLEKHG3A1L390 1219 aa11.59□□□□□ -0.55
LBR-204ENST00000424022 RCCD1A6NED2 376 aa11.59□□□□□ -0.55
LBR-204ENST00000424022 RABGEF1Q9UJ41 708 aa11.59□□□□□ -0.55
LBR-204ENST00000424022 PROX2Q3B8N5 592 aa11.58□□□□□ -0.56
LBR-204ENST00000424022 SULF1Q8IWU6 871 aa11.56□□□□□ -0.56
LBR-204ENST00000424022 KIAA1468Q9P260 1216 aa11.56□□□□□ -0.56
LBR-204ENST00000424022 RSPH6AQ9H0K4 717 aa11.55□□□□□ -0.56
LBR-204ENST00000424022 TMEM134Q9H6X4 195 aa11.55□□□□□ -0.56
LBR-204ENST00000424022 DIXDC1Q155Q3 683 aa11.54□□□□□ -0.56
LBR-204ENST00000424022 SH3D19Q5HYK7 790 aa11.53□□□□□ -0.56
LBR-204ENST00000424022 NLRP7Q8WX94 980 aa11.53□□□□□ -0.56
LBR-204ENST00000424022 STAC3Q96MF2 364 aa11.53□□□□□ -0.56
LBR-204ENST00000424022 BEGAINQ9BUH8 593 aa11.53□□□□□ -0.56
LBR-204ENST00000424022 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
LBR-204ENST00000424022 C3orf80F5H4A9 247 aa11.51□□□□□ -0.57
LBR-204ENST00000424022 NBPF3Q9H094 633 aa11.51□□□□□ -0.57
LBR-204ENST00000424022 LAPTM4BQ86VI4 370 aa11.5□□□□□ -0.57
LBR-204ENST00000424022 CD46P15529 392 aa11.49□□□□□ -0.57
LBR-204ENST00000424022 FAM98CQ17RN3 349 aaKnown RBP11.49□□□□□ -0.57
LBR-204ENST00000424022 RSPH4AQ5TD94 716 aa11.49□□□□□ -0.57
LBR-204ENST00000424022 PCMTD1Q96MG8 357 aaPredicted RBP11.49□□□□□ -0.57
LBR-204ENST00000424022 RB1CC1Q8TDY2 1594 aa11.49□□□□□ -0.57
LBR-204ENST00000424022 SMAPO00193 183 aa11.48□□□□□ -0.57
LBR-204ENST00000424022 SLC4A3P48751 1232 aa11.48□□□□□ -0.57
LBR-204ENST00000424022 HDGFP51858 240 aaKnown RBP11.48□□□□□ -0.57
LBR-204ENST00000424022 SKIV2LQ15477 1246 aaKnown RBP11.47□□□□□ -0.57
LBR-204ENST00000424022 MRPL50Q8N5N7 158 aaKnown RBP11.46□□□□□ -0.57
LBR-204ENST00000424022 KCTD12Q96CX2 325 aaKnown RBP11.45□□□□□ -0.58
LBR-204ENST00000424022 DDX11L8A8MPP1 907 aa11.44□□□□□ -0.58
LBR-204ENST00000424022 NACADO15069 1562 aa11.43□□□□□ -0.58
LBR-204ENST00000424022 SEPT9Q9UHD8 586 aaPredicted RBP11.43□□□□□ -0.58
LBR-204ENST00000424022 SLF2Q8IX21 1173 aa11.42□□□□□ -0.58
LBR-204ENST00000424022 TBC1D2Q9BYX2 928 aa11.42□□□□□ -0.58
LBR-204ENST00000424022 GOLGA8CPA6NN73 597 aa11.41□□□□□ -0.58
LBR-204ENST00000424022 SWT1Q5T5J6 900 aaKnown RBP11.41□□□□□ -0.58
LBR-204ENST00000424022 MYSM1Q5VVJ2 828 aa11.41□□□□□ -0.58
LBR-204ENST00000424022 NUTM1Q86Y26 1132 aa11.41□□□□□ -0.58
LBR-204ENST00000424022 NECTIN2Q92692 538 aa11.41□□□□□ -0.58
LBR-204ENST00000424022 RDH13Q8NBN7 331 aa11.4□□□□□ -0.58
LBR-204ENST00000424022 GJA5P36382 358 aa11.39□□□□□ -0.59
LBR-204ENST00000424022 USP46P62068 366 aa11.39□□□□□ -0.59
LBR-204ENST00000424022 TUSC1Q2TAM9 212 aa11.39□□□□□ -0.59
LBR-204ENST00000424022 C14orf37Q86TY3 774 aa11.39□□□□□ -0.59
LBR-204ENST00000424022 SPIRE2Q8WWL2 714 aa11.39□□□□□ -0.59
LBR-204ENST00000424022 TIMELESSQ9UNS1 1208 aa11.39□□□□□ -0.59
LBR-204ENST00000424022 CLK2P49760 499 aaKnown RBP11.38□□□□□ -0.59
LBR-204ENST00000424022 WNT2BQ93097 391 aa11.38□□□□□ -0.59
LBR-204ENST00000424022 HCSTQ9UBK5 93 aa11.37□□□□□ -0.59
LBR-204ENST00000424022 GCGRP47871 477 aa11.36□□□□□ -0.59
LBR-204ENST00000424022 PTPN5P54829 565 aa11.36□□□□□ -0.59
LBR-204ENST00000424022 ZFRQ96KR1 1074 aaKnown RBP11.36□□□□□ -0.59
LBR-204ENST00000424022 KDM4AO75164 1064 aa11.35□□□□□ -0.59
LBR-204ENST00000424022 SAMD7Q7Z3H4 446 aa11.35□□□□□ -0.59
LBR-204ENST00000424022 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.35□□□□□ -0.59
LBR-204ENST00000424022 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
LBR-204ENST00000424022 SPTLC1O15269 473 aa11.34□□□□□ -0.59
LBR-204ENST00000424022 SLC10A3P09131 477 aa11.34□□□□□ -0.59
LBR-204ENST00000424022 FLIIQ13045 1269 aa11.34□□□□□ -0.59
LBR-204ENST00000424022 THSD4Q6ZMP0 1018 aa11.34□□□□□ -0.59
LBR-204ENST00000424022 POLR3EQ9NVU0 708 aa11.34□□□□□ -0.59
LBR-204ENST00000424022 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
LBR-204ENST00000424022 RSBN1LQ6PCB5 846 aaPredicted RBP11.32□□□□□ -0.6
LBR-204ENST00000424022 LRCH3Q96II8 777 aa11.32□□□□□ -0.6
LBR-204ENST00000424022 ATP1B4Q9UN42 357 aaPredicted RBP11.31□□□□□ -0.6
LBR-204ENST00000424022 KMT5BQ4FZB7 885 aa11.3□□□□□ -0.6
LBR-204ENST00000424022 GRIPAP1Q4V328 841 aa11.3□□□□□ -0.6
LBR-204ENST00000424022 PROCA1Q8NCQ7 364 aaPredicted RBP11.3□□□□□ -0.6
LBR-204ENST00000424022 ANKK1Q8NFD2 765 aa11.3□□□□□ -0.6
LBR-204ENST00000424022 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
LBR-204ENST00000424022 BCAMP50895 628 aa11.29□□□□□ -0.6
LBR-204ENST00000424022 PPP2R2DQ66LE6 453 aa11.29□□□□□ -0.6
LBR-204ENST00000424022 PRR14Q9BWN1 585 aa11.29□□□□□ -0.6
LBR-204ENST00000424022 MOXD2PA6NHM9 499 aa11.28□□□□□ -0.6
LBR-204ENST00000424022 HOXA2O43364 376 aa11.28□□□□□ -0.6
LBR-204ENST00000424022 LIMD1Q9UGP4 676 aa11.28□□□□□ -0.6
LBR-204ENST00000424022 CFHP08603 1231 aa11.27□□□□□ -0.61
LBR-204ENST00000424022 PRPF38BQ5VTL8 546 aaKnown RBP11.27□□□□□ -0.61
LBR-204ENST00000424022 SOWAHBA6NEL2 793 aa11.26□□□□□ -0.61
LBR-204ENST00000424022 RNF40O75150 1001 aa11.26□□□□□ -0.61
LBR-204ENST00000424022 FDX1P10109 184 aa11.24□□□□□ -0.61
LBR-204ENST00000424022 TMEM259Q4ZIN3 620 aa11.24□□□□□ -0.61
LBR-204ENST00000424022 BANK1Q8NDB2 785 aa11.24□□□□□ -0.61
LBR-204ENST00000424022 NDUFV2P19404 249 aa11.23□□□□□ -0.61
LBR-204ENST00000424022 ATP6V1AP38606 617 aa11.23□□□□□ -0.61
LBR-204ENST00000424022 ACTN4O43707 911 aaKnown RBP11.22□□□□□ -0.61
LBR-204ENST00000424022 LILRB3O75022 631 aa11.22□□□□□ -0.61
LBR-204ENST00000424022 RFC5P40937 340 aa11.22□□□□□ -0.61
LBR-204ENST00000424022 ZBTB3Q9H5J0 574 aa11.22□□□□□ -0.61
LBR-204ENST00000424022 FUT2Q10981 343 aa11.21□□□□□ -0.61
LBR-204ENST00000424022 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
LBR-204ENST00000424022 TSR3Q9UJK0 312 aaKnown RBP11.21□□□□□ -0.61
LBR-204ENST00000424022 PPP4CP60510 307 aa11.2□□□□□ -0.62
LBR-204ENST00000424022 WBP1LQ9NX94 342 aa11.2□□□□□ -0.62
LBR-204ENST00000424022 SPDYE5A6NIY4 337 aa11.19□□□□□ -0.62
LBR-204ENST00000424022 SOCS7O14512 581 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms