RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
LINC01399-201ENST00000423311 ZFYVE9O95405 1425 aa12.94□□□□□ -0.34
LINC01399-201ENST00000423311 A2ML1A8K2U0 1454 aa12.93□□□□□ -0.34
LINC01399-201ENST00000423311 MYO3AQ8NEV4 1616 aa12.92□□□□□ -0.34
LINC01399-201ENST00000423311 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
LINC01399-201ENST00000423311 ZNF326Q5BKZ1 582 aaKnown RBP12.92□□□□□ -0.34
LINC01399-201ENST00000423311 VGFO15240 615 aaPredicted RBP12.91□□□□□ -0.34
LINC01399-201ENST00000423311 ZNF142P52746 1687 aaPredicted RBP12.91□□□□□ -0.34
LINC01399-201ENST00000423311 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
LINC01399-201ENST00000423311 CEBPAP49715 358 aaPredicted RBP12.9□□□□□ -0.34
LINC01399-201ENST00000423311 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
LINC01399-201ENST00000423311 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
LINC01399-201ENST00000423311 PTPRMP28827 1452 aa12.89□□□□□ -0.35
LINC01399-201ENST00000423311 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
LINC01399-201ENST00000423311 SETBP1Q9Y6X0 1596 aa12.88□□□□□ -0.35
LINC01399-201ENST00000423311 CEP170BQ9Y4F5 1589 aaPredicted RBP12.87□□□□□ -0.35
LINC01399-201ENST00000423311 ROCK2O75116 1388 aaKnown RBP12.87□□□□□ -0.35
LINC01399-201ENST00000423311 HDGFP51858 240 aaKnown RBP12.87□□□□□ -0.35
LINC01399-201ENST00000423311 EIF4G2P78344 907 aaKnown RBP eCLIP12.87□□□□□ -0.359e-13■■■■■ 53.7
LINC01399-201ENST00000423311 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC01399-201ENST00000423311 SLIT1O75093 1534 aa12.86□□□□□ -0.35
LINC01399-201ENST00000423311 RIMS2Q9UQ26 1411 aa12.86□□□□□ -0.35
LINC01399-201ENST00000423311 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
LINC01399-201ENST00000423311 ADGRF5Q8IZF2 1346 aa12.86□□□□□ -0.35
LINC01399-201ENST00000423311 POLR1AO95602 1720 aaPredicted RBP12.85□□□□□ -0.35
LINC01399-201ENST00000423311 CARD11Q9BXL7 1154 aa12.85□□□□□ -0.35
LINC01399-201ENST00000423311 TMEM2Q9UHN6 1383 aa12.84□□□□□ -0.35
LINC01399-201ENST00000423311 ARHGAP23Q9P227 1491 aa12.84□□□□□ -0.35
LINC01399-201ENST00000423311 THEMISQ8N1K5 641 aaPredicted RBP12.83□□□□□ -0.36
LINC01399-201ENST00000423311 C14orf93Q9H972 538 aaKnown RBP12.83□□□□□ -0.36
LINC01399-201ENST00000423311 USP47Q96K76 1375 aa12.82□□□□□ -0.36
LINC01399-201ENST00000423311 ADGRB1O14514 1584 aa12.81□□□□□ -0.36
LINC01399-201ENST00000423311 SCAF11Q99590 1463 aaKnown RBP12.81□□□□□ -0.36
LINC01399-201ENST00000423311 HSPA5P11021 654 aaKnown RBP12.81□□□□□ -0.36
LINC01399-201ENST00000423311 NBPF1Q3BBV0 1214 aa12.81□□□□□ -0.36
LINC01399-201ENST00000423311 SETD1AO15047 1707 aaKnown RBP12.81□□□□□ -0.36
LINC01399-201ENST00000423311 ALKQ9UM73 1620 aa12.8□□□□□ -0.36
LINC01399-201ENST00000423311 CFAP70Q5T0N1 1121 aa12.8□□□□□ -0.36
LINC01399-201ENST00000423311 NRXN3Q9Y4C0 1643 aa12.8□□□□□ -0.36
LINC01399-201ENST00000423311 PLPPR3Q6T4P5 718 aa12.79□□□□□ -0.36
LINC01399-201ENST00000423311 EID1Q9Y6B2 187 aa12.79□□□□□ -0.36
LINC01399-201ENST00000423311 EIF3AQ14152 1382 aaKnown RBP12.79□□□□□ -0.36
LINC01399-201ENST00000423311 PLEKHG1Q9ULL1 1385 aa12.78□□□□□ -0.36
LINC01399-201ENST00000423311 KDM4FA0A1W2PPD8 638 aa12.77□□□□□ -0.37
LINC01399-201ENST00000423311 NUTM2DQ5VT03 806 aaPredicted RBP12.77□□□□□ -0.37
LINC01399-201ENST00000423311 DIP2AQ14689 1571 aa12.77□□□□□ -0.37
LINC01399-201ENST00000423311 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
LINC01399-201ENST00000423311 ARHGEF28Q8N1W1 1705 aaKnown RBP12.76□□□□□ -0.37
LINC01399-201ENST00000423311 TXNDC2Q86VQ3 553 aa12.75□□□□□ -0.37
LINC01399-201ENST00000423311 ASXL1Q8IXJ9 1541 aa12.75□□□□□ -0.37
LINC01399-201ENST00000423311 KNDC1Q76NI1 1749 aa12.74□□□□□ -0.37
LINC01399-201ENST00000423311 MED14O60244 1454 aa12.74□□□□□ -0.37
LINC01399-201ENST00000423311 ST20-MTHFSA0A0A6YYL1 179 aa12.74□□□□□ -0.37
LINC01399-201ENST00000423311 LTKP29376 864 aa12.74□□□□□ -0.37
LINC01399-201ENST00000423311 SBNO2Q9Y2G9 1366 aa12.73□□□□□ -0.37
LINC01399-201ENST00000423311 HIRIP3Q9BW71 556 aaPredicted RBP12.73□□□□□ -0.37
LINC01399-201ENST00000423311 DLC1Q96QB1 1528 aa12.72□□□□□ -0.37
LINC01399-201ENST00000423311 ADAMTS13Q76LX8 1427 aa12.72□□□□□ -0.37
LINC01399-201ENST00000423311 YTHDC2Q9H6S0 1430 aaKnown RBP12.72□□□□□ -0.37
LINC01399-201ENST00000423311 ANKLE2Q86XL3 938 aa12.72□□□□□ -0.37
LINC01399-201ENST00000423311 QRICH2Q9H0J4 1663 aa12.72□□□□□ -0.37
LINC01399-201ENST00000423311 TMEM132EQ6IEE7 984 aa12.7□□□□□ -0.38
LINC01399-201ENST00000423311 TESK2Q96S53 571 aa12.7□□□□□ -0.38
LINC01399-201ENST00000423311 TBX22Q9Y458 520 aa12.7□□□□□ -0.38
LINC01399-201ENST00000423311 TECPR2O15040 1411 aa12.7□□□□□ -0.38
LINC01399-201ENST00000423311 LRPPRCP42704 1394 aaKnown RBP12.69□□□□□ -0.38
LINC01399-201ENST00000423311 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
LINC01399-201ENST00000423311 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
LINC01399-201ENST00000423311 WASHC2AQ641Q2 1341 aa12.69□□□□□ -0.38
LINC01399-201ENST00000423311 PIK3R4Q99570 1358 aa12.69□□□□□ -0.38
LINC01399-201ENST00000423311 CPS1P31327 1500 aa12.68□□□□□ -0.38
LINC01399-201ENST00000423311 CENPJQ9HC77 1338 aaPredicted RBP12.68□□□□□ -0.38
LINC01399-201ENST00000423311 TMF1P82094 1093 aa12.68□□□□□ -0.38
LINC01399-201ENST00000423311 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
LINC01399-201ENST00000423311 SIRT1Q96EB6 747 aa12.68□□□□□ -0.38
LINC01399-201ENST00000423311 BCANQ96GW7 911 aa12.68□□□□□ -0.38
LINC01399-201ENST00000423311 TRAK1Q9UPV9 953 aa12.68□□□□□ -0.38
LINC01399-201ENST00000423311 METP08581 1390 aa12.68□□□□□ -0.38
LINC01399-201ENST00000423311 KIF7Q2M1P5 1343 aa12.67□□□□□ -0.38
LINC01399-201ENST00000423311 C11orf95C9JLR9 678 aaPredicted RBP12.67□□□□□ -0.38
LINC01399-201ENST00000423311 CDCA8Q53HL2 280 aa12.67□□□□□ -0.38
LINC01399-201ENST00000423311 FAM135BQ49AJ0 1406 aa12.67□□□□□ -0.38
LINC01399-201ENST00000423311 CHD2O14647 1828 aaKnown RBP12.67□□□□□ -0.38
LINC01399-201ENST00000423311 LMTK3Q96Q04 1460 aa12.66□□□□□ -0.38
LINC01399-201ENST00000423311 XRN1Q8IZH2 1706 aaKnown RBP12.65□□□□□ -0.38
LINC01399-201ENST00000423311 NPHP4O75161 1426 aaPredicted RBP12.65□□□□□ -0.38
LINC01399-201ENST00000423311 PUS7Q96PZ0 661 aaKnown RBP12.63□□□□□ -0.39
LINC01399-201ENST00000423311 SLC26A8Q96RN1 970 aa12.63□□□□□ -0.39
LINC01399-201ENST00000423311 STK26Q9P289 416 aa12.63□□□□□ -0.39
LINC01399-201ENST00000423311 DISP3Q9P2K9 1392 aa12.63□□□□□ -0.39
LINC01399-201ENST00000423311 PTCH1Q13635 1447 aa12.62□□□□□ -0.39
LINC01399-201ENST00000423311 DDX10Q13206 875 aaKnown RBP12.62□□□□□ -0.39
LINC01399-201ENST00000423311 SENP3Q9H4L4 574 aaPredicted RBP12.62□□□□□ -0.39
LINC01399-201ENST00000423311 PTPRUQ92729 1446 aa12.62□□□□□ -0.39
LINC01399-201ENST00000423311 STRCQ7RTU9 1775 aa12.61□□□□□ -0.39
LINC01399-201ENST00000423311 PRAM1Q96QH2 718 aa12.61□□□□□ -0.39
LINC01399-201ENST00000423311 POGKQ9P215 609 aa12.61□□□□□ -0.39
LINC01399-201ENST00000423311 EVC2Q86UK5 1308 aa12.61□□□□□ -0.39
LINC01399-201ENST00000423311 MYOM1P52179 1685 aa12.61□□□□□ -0.39
LINC01399-201ENST00000423311 ADGRB2O60241 1585 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms