RNA–Protein interactions for RNA: ENST00000423108.5

RPUSD3-203, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-203ENST00000423108 UBR1Q8IWV7 1749 aa18.18■□□□□ 0.5
RPUSD3-203ENST00000423108 CEP170BQ9Y4F5 1589 aaPredicted RBP18.18■□□□□ 0.5
RPUSD3-203ENST00000423108 RIMS2Q9UQ26 1411 aa18.18■□□□□ 0.5
RPUSD3-203ENST00000423108 LTKP29376 864 aa18.18■□□□□ 0.5
RPUSD3-203ENST00000423108 LMTK3Q96Q04 1460 aa18.18■□□□□ 0.5
RPUSD3-203ENST00000423108 ZFYVE9O95405 1425 aa18.16■□□□□ 0.5
RPUSD3-203ENST00000423108 NEXMIFQ5QGS0 1516 aa18.16■□□□□ 0.5
RPUSD3-203ENST00000423108 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.5
RPUSD3-203ENST00000423108 HSPA2P54652 639 aa18.14■□□□□ 0.49
RPUSD3-203ENST00000423108 TXNDC2Q86VQ3 553 aa18.14■□□□□ 0.49
RPUSD3-203ENST00000423108 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
RPUSD3-203ENST00000423108 KDM5AP29375 1690 aaKnown RBP18.14■□□□□ 0.49
RPUSD3-203ENST00000423108 ZNF142P52746 1687 aaPredicted RBP18.13■□□□□ 0.49
RPUSD3-203ENST00000423108 VGFO15240 615 aaPredicted RBP18.13■□□□□ 0.49
RPUSD3-203ENST00000423108 STAC3Q96MF2 364 aa18.13■□□□□ 0.49
RPUSD3-203ENST00000423108 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.12■□□□□ 0.49
RPUSD3-203ENST00000423108 SLIT1O75093 1534 aa18.12■□□□□ 0.49
RPUSD3-203ENST00000423108 PRAG1Q86YV5 1406 aa18.11■□□□□ 0.49
RPUSD3-203ENST00000423108 PPLO60437 1756 aa18.1■□□□□ 0.49
RPUSD3-203ENST00000423108 MYOM2P54296 1465 aa18.1■□□□□ 0.49
RPUSD3-203ENST00000423108 NRXN1Q9ULB1 1477 aa18.1■□□□□ 0.49
RPUSD3-203ENST00000423108 HDGFP51858 240 aaKnown RBP18.1■□□□□ 0.49
RPUSD3-203ENST00000423108 IFT172Q9UG01 1749 aa18.09■□□□□ 0.49
RPUSD3-203ENST00000423108 NCKAP5LQ9HCH0 1330 aa18.09■□□□□ 0.49
RPUSD3-203ENST00000423108 CFAP70Q5T0N1 1121 aa18.09■□□□□ 0.49
RPUSD3-203ENST00000423108 ANKLE2Q86XL3 938 aa18.09■□□□□ 0.49
RPUSD3-203ENST00000423108 EID1Q9Y6B2 187 aa18.09■□□□□ 0.49
RPUSD3-203ENST00000423108 NBPF1Q3BBV0 1214 aa18.08■□□□□ 0.48
RPUSD3-203ENST00000423108 C14orf93Q9H972 538 aaKnown RBP18.07■□□□□ 0.48
RPUSD3-203ENST00000423108 SCAF11Q99590 1463 aaKnown RBP18.06■□□□□ 0.48
RPUSD3-203ENST00000423108 PIK3C2GO75747 1445 aa18.06■□□□□ 0.48
RPUSD3-203ENST00000423108 PLEKHG1Q9ULL1 1385 aa18.04■□□□□ 0.48
RPUSD3-203ENST00000423108 ADAMTS13Q76LX8 1427 aa18.02■□□□□ 0.48
RPUSD3-203ENST00000423108 BCANQ96GW7 911 aa18.02■□□□□ 0.48
RPUSD3-203ENST00000423108 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
RPUSD3-203ENST00000423108 SLC26A8Q96RN1 970 aa18.01■□□□□ 0.47
RPUSD3-203ENST00000423108 MED14O60244 1454 aa17.99■□□□□ 0.47
RPUSD3-203ENST00000423108 RALGAPBQ86X10 1494 aa17.99■□□□□ 0.47
RPUSD3-203ENST00000423108 NPHP4O75161 1426 aaPredicted RBP17.98■□□□□ 0.47
RPUSD3-203ENST00000423108 ALKQ9UM73 1620 aa17.98■□□□□ 0.47
RPUSD3-203ENST00000423108 NRXN3Q9Y4C0 1643 aa17.98■□□□□ 0.47
RPUSD3-203ENST00000423108 TBX22Q9Y458 520 aa17.98■□□□□ 0.47
RPUSD3-203ENST00000423108 SETBP1Q9Y6X0 1596 aa17.98■□□□□ 0.47
RPUSD3-203ENST00000423108 METP08581 1390 aa17.97■□□□□ 0.47
RPUSD3-203ENST00000423108 ROCK2O75116 1388 aaKnown RBP17.96■□□□□ 0.47
RPUSD3-203ENST00000423108 GPRASP1Q5JY77 1395 aa17.96■□□□□ 0.47
RPUSD3-203ENST00000423108 TRPM1Q7Z4N2 1603 aa17.96■□□□□ 0.47
RPUSD3-203ENST00000423108 CARD11Q9BXL7 1154 aa17.95■□□□□ 0.46
RPUSD3-203ENST00000423108 ASXL1Q8IXJ9 1541 aa17.94■□□□□ 0.46
RPUSD3-203ENST00000423108 ADGRB1O14514 1584 aa17.94■□□□□ 0.46
RPUSD3-203ENST00000423108 STRCQ7RTU9 1775 aa17.94■□□□□ 0.46
RPUSD3-203ENST00000423108 IQGAP1P46940 1657 aa17.93■□□□□ 0.46
RPUSD3-203ENST00000423108 STK26Q9P289 416 aa17.92■□□□□ 0.46
RPUSD3-203ENST00000423108 KIAA1210Q9ULL0 1709 aa17.92■□□□□ 0.46
RPUSD3-203ENST00000423108 PTPRUQ92729 1446 aa17.91■□□□□ 0.46
RPUSD3-203ENST00000423108 SETD1AO15047 1707 aaKnown RBP17.91■□□□□ 0.46
RPUSD3-203ENST00000423108 TRAK1Q9UPV9 953 aa17.9■□□□□ 0.46
RPUSD3-203ENST00000423108 POLR1AO95602 1720 aaPredicted RBP17.89■□□□□ 0.46
RPUSD3-203ENST00000423108 HSPA5P11021 654 aaKnown RBP17.89■□□□□ 0.45
RPUSD3-203ENST00000423108 HIRIP3Q9BW71 556 aaPredicted RBP17.89■□□□□ 0.45
RPUSD3-203ENST00000423108 LRPPRCP42704 1394 aaKnown RBP17.89■□□□□ 0.45
RPUSD3-203ENST00000423108 YTHDC2Q9H6S0 1430 aaKnown RBP17.89■□□□□ 0.45
RPUSD3-203ENST00000423108 AMOTL2Q9Y2J4 779 aa17.88■□□□□ 0.45
RPUSD3-203ENST00000423108 ABCC11Q96J66 1382 aa17.87■□□□□ 0.45
RPUSD3-203ENST00000423108 LAMC1P11047 1609 aa17.87■□□□□ 0.45
RPUSD3-203ENST00000423108 USP47Q96K76 1375 aa17.86■□□□□ 0.45
RPUSD3-203ENST00000423108 ST20-MTHFSA0A0A6YYL1 179 aa17.85■□□□□ 0.45
RPUSD3-203ENST00000423108 EIF4G2P78344 907 aaKnown RBP eCLIP17.85■□□□□ 0.45
RPUSD3-203ENST00000423108 DIP2AQ14689 1571 aa17.85■□□□□ 0.45
RPUSD3-203ENST00000423108 PIK3R4Q99570 1358 aa17.85■□□□□ 0.45
RPUSD3-203ENST00000423108 KCNA6P17658 529 aa17.84■□□□□ 0.45
RPUSD3-203ENST00000423108 WAPLQ7Z5K2 1190 aa17.84■□□□□ 0.45
RPUSD3-203ENST00000423108 DMRT2Q9Y5R5 561 aa17.83■□□□□ 0.44
RPUSD3-203ENST00000423108 ROBO2Q9HCK4 1378 aa17.82■□□□□ 0.44
RPUSD3-203ENST00000423108 PLEKHH1Q9ULM0 1364 aa17.82■□□□□ 0.44
RPUSD3-203ENST00000423108 SIRT1Q96EB6 747 aa17.82■□□□□ 0.44
RPUSD3-203ENST00000423108 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
RPUSD3-203ENST00000423108 TECPR2O15040 1411 aa17.81■□□□□ 0.44
RPUSD3-203ENST00000423108 SAFB2Q14151 953 aaKnown RBP eCLIP17.8■□□□□ 0.44
RPUSD3-203ENST00000423108 TESK2Q96S53 571 aa17.8■□□□□ 0.44
RPUSD3-203ENST00000423108 ZNF335Q9H4Z2 1342 aaPredicted RBP17.79■□□□□ 0.44
RPUSD3-203ENST00000423108 DLC1Q96QB1 1528 aa17.78■□□□□ 0.44
RPUSD3-203ENST00000423108 CENPJQ9HC77 1338 aaPredicted RBP17.78■□□□□ 0.44
RPUSD3-203ENST00000423108 C11orf95C9JLR9 678 aaPredicted RBP17.78■□□□□ 0.44
RPUSD3-203ENST00000423108 RBM33Q96EV2 1170 aaKnown RBP17.78■□□□□ 0.44
RPUSD3-203ENST00000423108 POGKQ9P215 609 aa17.78■□□□□ 0.44
RPUSD3-203ENST00000423108 CHD2O14647 1828 aaKnown RBP17.77■□□□□ 0.44
RPUSD3-203ENST00000423108 XRN1Q8IZH2 1706 aaKnown RBP17.76■□□□□ 0.43
RPUSD3-203ENST00000423108 FAM135BQ49AJ0 1406 aa17.76■□□□□ 0.43
RPUSD3-203ENST00000423108 EIF3AQ14152 1382 aaKnown RBP17.76■□□□□ 0.43
RPUSD3-203ENST00000423108 PROSER2Q86WR7 435 aaPredicted RBP17.75■□□□□ 0.43
RPUSD3-203ENST00000423108 PTCH1Q13635 1447 aa17.74■□□□□ 0.43
RPUSD3-203ENST00000423108 CPS1P31327 1500 aa17.74■□□□□ 0.43
RPUSD3-203ENST00000423108 ARHGEF28Q8N1W1 1705 aaKnown RBP17.74■□□□□ 0.43
RPUSD3-203ENST00000423108 NWD1Q149M9 1564 aa17.74■□□□□ 0.43
RPUSD3-203ENST00000423108 STRCP1A6NGW2 1772 aa17.74■□□□□ 0.43
RPUSD3-203ENST00000423108 MINK1Q8N4C8 1332 aaPredicted RBP17.73■□□□□ 0.43
RPUSD3-203ENST00000423108 KNDC1Q76NI1 1749 aa17.72■□□□□ 0.43
RPUSD3-203ENST00000423108 ZNF316A6NFI3 1004 aaPredicted RBP17.72■□□□□ 0.43
RPUSD3-203ENST00000423108 DISP3Q9P2K9 1392 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms