RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 USP19O94966 1318 aa16.49■□□□□ 0.23
CTCFL-204ENST00000422869 SLFN5Q08AF3 891 aa16.49■□□□□ 0.23
CTCFL-204ENST00000422869 WDR43Q15061 677 aaKnown RBP eCLIP16.49■□□□□ 0.23
CTCFL-204ENST00000422869 TRMT2AQ8IZ69 625 aaKnown RBP16.48■□□□□ 0.23
CTCFL-204ENST00000422869 PKNOX2Q96KN3 472 aa16.48■□□□□ 0.23
CTCFL-204ENST00000422869 IQGAP3Q86VI3 1631 aa16.47■□□□□ 0.23
CTCFL-204ENST00000422869 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
CTCFL-204ENST00000422869 PREX2Q70Z35 1606 aa16.47■□□□□ 0.23
CTCFL-204ENST00000422869 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
CTCFL-204ENST00000422869 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
CTCFL-204ENST00000422869 IQGAP1P46940 1657 aa16.45■□□□□ 0.22
CTCFL-204ENST00000422869 NKTRP30414 1462 aaKnown RBP16.45■□□□□ 0.22
CTCFL-204ENST00000422869 SYNMO15061 1565 aa16.45■□□□□ 0.22
CTCFL-204ENST00000422869 KNSTRNQ9Y448 316 aa16.44■□□□□ 0.22
CTCFL-204ENST00000422869 PIK3C2GO75747 1445 aa16.44■□□□□ 0.22
CTCFL-204ENST00000422869 IGHDP01880 384 aa16.44■□□□□ 0.22
CTCFL-204ENST00000422869 JPH4Q96JJ6 628 aa16.44■□□□□ 0.22
CTCFL-204ENST00000422869 ATP10AO60312 1499 aa16.43■□□□□ 0.22
CTCFL-204ENST00000422869 BCAR3O75815 825 aa16.43■□□□□ 0.22
CTCFL-204ENST00000422869 MAST1Q9Y2H9 1570 aa16.43■□□□□ 0.22
CTCFL-204ENST00000422869 MYOM1P52179 1685 aa16.43■□□□□ 0.22
CTCFL-204ENST00000422869 NLRP1Q9C000 1473 aa16.43■□□□□ 0.22
CTCFL-204ENST00000422869 ABCC2Q92887 1545 aa16.43■□□□□ 0.22
CTCFL-204ENST00000422869 ASXL1Q8IXJ9 1541 aa16.42■□□□□ 0.22
CTCFL-204ENST00000422869 CHMP7Q8WUX9 453 aaPredicted RBP16.42■□□□□ 0.22
CTCFL-204ENST00000422869 POGKQ9P215 609 aa16.42■□□□□ 0.22
CTCFL-204ENST00000422869 SYCP2Q9BX26 1530 aa16.41■□□□□ 0.22
CTCFL-204ENST00000422869 SEC24BO95487 1268 aa16.41■□□□□ 0.22
CTCFL-204ENST00000422869 CCDC146Q8IYE0 955 aa16.41■□□□□ 0.22
CTCFL-204ENST00000422869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.41■□□□□ 0.221e-10■□□□□ 8.3
CTCFL-204ENST00000422869 MADDQ8WXG6 1647 aa16.41■□□□□ 0.22
CTCFL-204ENST00000422869 RSPH6AQ9H0K4 717 aa16.4■□□□□ 0.22
CTCFL-204ENST00000422869 RSPH4AQ5TD94 716 aa16.39■□□□□ 0.21
CTCFL-204ENST00000422869 PLXNC1O60486 1568 aa16.39■□□□□ 0.21
CTCFL-204ENST00000422869 APAF1O14727 1248 aa16.38■□□□□ 0.21
CTCFL-204ENST00000422869 DMRT2Q9Y5R5 561 aa16.37■□□□□ 0.21
CTCFL-204ENST00000422869 NPC1L1Q9UHC9 1359 aa16.36■□□□□ 0.21
CTCFL-204ENST00000422869 MAPK8IP3Q9UPT6 1336 aa16.36■□□□□ 0.21
CTCFL-204ENST00000422869 E9PSI1 815 aa16.35■□□□□ 0.21
CTCFL-204ENST00000422869 ANTXR1Q9H6X2 564 aa16.35■□□□□ 0.21
CTCFL-204ENST00000422869 CGNL1Q0VF96 1302 aa16.35■□□□□ 0.21
CTCFL-204ENST00000422869 FBLN2P98095 1184 aa16.35■□□□□ 0.21
CTCFL-204ENST00000422869 SLKQ9H2G2 1235 aaPredicted RBP16.35■□□□□ 0.21
CTCFL-204ENST00000422869 PDE3AQ14432 1141 aa16.34■□□□□ 0.21
CTCFL-204ENST00000422869 CLUAP1Q96AJ1 413 aa16.34■□□□□ 0.21
CTCFL-204ENST00000422869 SPHKAPQ2M3C7 1700 aa16.34■□□□□ 0.21
CTCFL-204ENST00000422869 BECN1Q14457 450 aa16.34■□□□□ 0.21
CTCFL-204ENST00000422869 TTC37Q6PGP7 1564 aa16.33■□□□□ 0.21
CTCFL-204ENST00000422869 RRAGDQ9NQL2 400 aaPredicted RBP16.33■□□□□ 0.2
CTCFL-204ENST00000422869 SCAF11Q99590 1463 aaKnown RBP16.32■□□□□ 0.2
CTCFL-204ENST00000422869 NINLQ9Y2I6 1382 aa16.32■□□□□ 0.2
CTCFL-204ENST00000422869 DUOX2Q9NRD8 1548 aa16.32■□□□□ 0.2
CTCFL-204ENST00000422869 CDCA8Q53HL2 280 aa16.32■□□□□ 0.2
CTCFL-204ENST00000422869 PANK1Q8TE04 598 aa16.32■□□□□ 0.2
CTCFL-204ENST00000422869 ARHGAP5Q13017 1502 aa16.31■□□□□ 0.2
CTCFL-204ENST00000422869 COG6Q9Y2V7 657 aa16.31■□□□□ 0.2
CTCFL-204ENST00000422869 KDM5AP29375 1690 aaKnown RBP16.31■□□□□ 0.2
CTCFL-204ENST00000422869 CEP152O94986 1710 aa16.31■□□□□ 0.2
CTCFL-204ENST00000422869 CENPJQ9HC77 1338 aaPredicted RBP16.29■□□□□ 0.2
CTCFL-204ENST00000422869 SCAPERQ9BY12 1400 aa16.29■□□□□ 0.2
CTCFL-204ENST00000422869 L1TD1Q5T7N2 865 aaKnown RBP16.29■□□□□ 0.2
CTCFL-204ENST00000422869 TBC1D32Q96NH3 1257 aa16.28■□□□□ 0.2
CTCFL-204ENST00000422869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.28■□□□□ 0.23e-12■■■■■ 30.2
CTCFL-204ENST00000422869 TBC1D2Q9BYX2 928 aa16.27■□□□□ 0.19
CTCFL-204ENST00000422869 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
CTCFL-204ENST00000422869 NGEFQ8N5V2 710 aa16.26■□□□□ 0.19
CTCFL-204ENST00000422869 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
CTCFL-204ENST00000422869 ZMYM3Q14202 1370 aa16.26■□□□□ 0.19
CTCFL-204ENST00000422869 WWC1Q8IX03 1113 aa16.26■□□□□ 0.19
CTCFL-204ENST00000422869 CANXP27824 592 aaKnown RBP16.26■□□□□ 0.19
CTCFL-204ENST00000422869 TRPM2O94759 1503 aa16.25■□□□□ 0.19
CTCFL-204ENST00000422869 PCDHB15Q9Y5E8 787 aa16.24■□□□□ 0.19
CTCFL-204ENST00000422869 SHPRHQ149N8 1683 aa16.24■□□□□ 0.19
CTCFL-204ENST00000422869 CLTCL1P53675 1640 aa16.23■□□□□ 0.19
CTCFL-204ENST00000422869 FSD2A1L4K1 749 aa16.23■□□□□ 0.19
CTCFL-204ENST00000422869 XRCC6P12956 609 aaKnown RBP eCLIP16.23■□□□□ 0.19
CTCFL-204ENST00000422869 KIAA1210Q9ULL0 1709 aa16.23■□□□□ 0.19
CTCFL-204ENST00000422869 PMFBP1Q8TBY8 1022 aa16.23■□□□□ 0.19
CTCFL-204ENST00000422869 CARD14Q9BXL6 1004 aa16.23■□□□□ 0.19
CTCFL-204ENST00000422869 RLBP1P12271 317 aa16.22■□□□□ 0.19
CTCFL-204ENST00000422869 UPF2Q9HAU5 1272 aaKnown RBP16.22■□□□□ 0.19
CTCFL-204ENST00000422869 ERVK-7P63135 1459 aa16.22■□□□□ 0.19
CTCFL-204ENST00000422869 RARSP54136 660 aaKnown RBP16.22■□□□□ 0.19
CTCFL-204ENST00000422869 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.19
CTCFL-204ENST00000422869 TNNQ9UQP3 1299 aa16.21■□□□□ 0.19
CTCFL-204ENST00000422869 POLR3AO14802 1390 aaPredicted RBP16.21■□□□□ 0.18
CTCFL-204ENST00000422869 AAMPQ13685 434 aa16.2■□□□□ 0.18
CTCFL-204ENST00000422869 RTEL1-TNFRSF6BF6WH68 1400 aa16.19■□□□□ 0.18
CTCFL-204ENST00000422869 IQSEC2Q5JU85 1478 aa16.19■□□□□ 0.18
CTCFL-204ENST00000422869 GOLGA6L3A6NEY3 463 aa16.19■□□□□ 0.18
CTCFL-204ENST00000422869 MCM4P33991 863 aa16.19■□□□□ 0.18
CTCFL-204ENST00000422869 ARXQ96QS3 562 aa16.19■□□□□ 0.18
CTCFL-204ENST00000422869 PANK2Q9BZ23 570 aa16.19■□□□□ 0.18
CTCFL-204ENST00000422869 PTPRTO14522 1441 aa16.19■□□□□ 0.18
CTCFL-204ENST00000422869 STAC3Q96MF2 364 aa16.18■□□□□ 0.18
CTCFL-204ENST00000422869 SPRYD3Q8NCJ5 442 aa16.17■□□□□ 0.18
CTCFL-204ENST00000422869 PHF23Q9BUL5 403 aaPredicted RBP16.17■□□□□ 0.18
CTCFL-204ENST00000422869 GZF1Q9H116 711 aaPredicted RBP16.16■□□□□ 0.18
CTCFL-204ENST00000422869 ABCA6Q8N139 1617 aa16.15■□□□□ 0.18
CTCFL-204ENST00000422869 RRP7AQ9Y3A4 280 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms