RNA–Protein interactions for RNA: ENST00000422447.7

LDHA-205, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 2,416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-205ENST00000422447 CFAP70Q5T0N1 1121 aa17.2■□□□□ 0.34
LDHA-205ENST00000422447 IRX6P78412 446 aaPredicted RBP17.2■□□□□ 0.34
LDHA-205ENST00000422447 SCAF11Q99590 1463 aaKnown RBP17.19■□□□□ 0.34
LDHA-205ENST00000422447 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
LDHA-205ENST00000422447 NPATQ14207 1427 aa17.19■□□□□ 0.34
LDHA-205ENST00000422447 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
LDHA-205ENST00000422447 PARD3Q8TEW0 1356 aa17.19■□□□□ 0.34
LDHA-205ENST00000422447 CHGAP10645 457 aaKnown RBP17.18■□□□□ 0.34
LDHA-205ENST00000422447 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
LDHA-205ENST00000422447 CFAP65Q6ZU64 1925 aaKnown RBP17.18■□□□□ 0.34
LDHA-205ENST00000422447 NEURL4Q96JN8 1562 aa17.17■□□□□ 0.34
LDHA-205ENST00000422447 IQGAP1P46940 1657 aa17.16■□□□□ 0.34
LDHA-205ENST00000422447 SIGLEC1Q9BZZ2 1709 aa17.16■□□□□ 0.34
LDHA-205ENST00000422447 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
LDHA-205ENST00000422447 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
LDHA-205ENST00000422447 MYOM2P54296 1465 aa17.14■□□□□ 0.33
LDHA-205ENST00000422447 ABCC3O15438 1527 aa17.14■□□□□ 0.33
LDHA-205ENST00000422447 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
LDHA-205ENST00000422447 NOS1P29475 1434 aa17.12■□□□□ 0.33
LDHA-205ENST00000422447 MROH2AA6NES4 1674 aa17.12■□□□□ 0.33
LDHA-205ENST00000422447 KIF1BO60333 1816 aa17.11■□□□□ 0.33
LDHA-205ENST00000422447 DNAJC5Q9H3Z4 198 aa17.11■□□□□ 0.33
LDHA-205ENST00000422447 ADGRB3O60242 1522 aa17.1■□□□□ 0.33
LDHA-205ENST00000422447 EIF3AQ14152 1382 aaKnown RBP17.1■□□□□ 0.33
LDHA-205ENST00000422447 CDCA8Q53HL2 280 aa17.1■□□□□ 0.33
LDHA-205ENST00000422447 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
LDHA-205ENST00000422447 CAMSAP1Q5T5Y3 1602 aa17.1■□□□□ 0.33
LDHA-205ENST00000422447 NRXN1Q9ULB1 1477 aa17.09■□□□□ 0.33
LDHA-205ENST00000422447 KIAA1210Q9ULL0 1709 aa17.09■□□□□ 0.33
LDHA-205ENST00000422447 SMG6Q86US8 1419 aaKnown RBP17.08■□□□□ 0.32
LDHA-205ENST00000422447 ARHGEF40Q8TER5 1519 aa17.08■□□□□ 0.32
LDHA-205ENST00000422447 KNSTRNQ9Y448 316 aa17.08■□□□□ 0.32
LDHA-205ENST00000422447 NUDCQ9Y266 331 aa17.07■□□□□ 0.32
LDHA-205ENST00000422447 IFT172Q9UG01 1749 aa17.06■□□□□ 0.32
LDHA-205ENST00000422447 MLECQ14165 292 aa17.06■□□□□ 0.32
LDHA-205ENST00000422447 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
LDHA-205ENST00000422447 NUTM2DQ5VT03 806 aaPredicted RBP17.05■□□□□ 0.32
LDHA-205ENST00000422447 C14orf93Q9H972 538 aaKnown RBP17.05■□□□□ 0.32
LDHA-205ENST00000422447 REREQ9P2R6 1566 aa17.04■□□□□ 0.32
LDHA-205ENST00000422447 TMEM132EQ6IEE7 984 aa17.04■□□□□ 0.32
LDHA-205ENST00000422447 SALL2Q9Y467 1007 aaPredicted RBP17.04■□□□□ 0.32
LDHA-205ENST00000422447 PIK3C2GO75747 1445 aa17.03■□□□□ 0.32
LDHA-205ENST00000422447 TRAK1Q9UPV9 953 aa17.03■□□□□ 0.32
LDHA-205ENST00000422447 RPGRIP1LQ68CZ1 1315 aa17.03■□□□□ 0.32
LDHA-205ENST00000422447 ERVK-7P63135 1459 aa17.03■□□□□ 0.32
LDHA-205ENST00000422447 IDI1Q13907 227 aa17.02■□□□□ 0.32
LDHA-205ENST00000422447 ZC3H13Q5T200 1668 aaKnown RBP17.02■□□□□ 0.32
LDHA-205ENST00000422447 ERICH6BQ5W0A0 696 aa17.02■□□□□ 0.32
LDHA-205ENST00000422447 AGLP35573 1532 aa17.02■□□□□ 0.31
LDHA-205ENST00000422447 SYNMO15061 1565 aa17.01■□□□□ 0.31
LDHA-205ENST00000422447 ARHGAP31Q2M1Z3 1444 aa17.01■□□□□ 0.31
LDHA-205ENST00000422447 SLC24A1O60721 1099 aa17■□□□□ 0.31
LDHA-205ENST00000422447 CENPJQ9HC77 1338 aaPredicted RBP17■□□□□ 0.31
LDHA-205ENST00000422447 PPP2R1AP30153 589 aa17■□□□□ 0.31
LDHA-205ENST00000422447 PPP4R2Q9NY27 417 aa16.99■□□□□ 0.31
LDHA-205ENST00000422447 PPLO60437 1756 aa16.98■□□□□ 0.31
LDHA-205ENST00000422447 FBXO31Q5XUX0 539 aaPredicted RBP16.98■□□□□ 0.31
LDHA-205ENST00000422447 MYOM1P52179 1685 aa16.98■□□□□ 0.31
LDHA-205ENST00000422447 CLTCQ00610 1675 aaKnown RBP16.98■□□□□ 0.31
LDHA-205ENST00000422447 ADGRB1O14514 1584 aa16.97■□□□□ 0.31
LDHA-205ENST00000422447 SETBP1Q9Y6X0 1596 aa16.97■□□□□ 0.31
LDHA-205ENST00000422447 VGFO15240 615 aaPredicted RBP16.97■□□□□ 0.31
LDHA-205ENST00000422447 CARD14Q9BXL6 1004 aa16.97■□□□□ 0.31
LDHA-205ENST00000422447 SBNO2Q9Y2G9 1366 aa16.97■□□□□ 0.31
LDHA-205ENST00000422447 ASXL1Q8IXJ9 1541 aa16.97■□□□□ 0.31
LDHA-205ENST00000422447 PIK3C2BO00750 1634 aa16.97■□□□□ 0.31
LDHA-205ENST00000422447 RNF123Q5XPI4 1314 aa16.96■□□□□ 0.31
LDHA-205ENST00000422447 SLC52A1Q9NWF4 448 aa16.96■□□□□ 0.31
LDHA-205ENST00000422447 KDM5AP29375 1690 aaKnown RBP16.96■□□□□ 0.31
LDHA-205ENST00000422447 PREX1Q8TCU6 1659 aa16.96■□□□□ 0.31
LDHA-205ENST00000422447 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.3
LDHA-205ENST00000422447 ADAMTS8Q9UP79 889 aa16.95■□□□□ 0.3
LDHA-205ENST00000422447 NPC1L1Q9UHC9 1359 aa16.94■□□□□ 0.3
LDHA-205ENST00000422447 NEXMIFQ5QGS0 1516 aa16.94■□□□□ 0.3
LDHA-205ENST00000422447 BLMP54132 1417 aaPredicted RBP16.94■□□□□ 0.3
LDHA-205ENST00000422447 MYO3AQ8NEV4 1616 aa16.93■□□□□ 0.3
LDHA-205ENST00000422447 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
LDHA-205ENST00000422447 CDCA7LQ96GN5 454 aa16.92■□□□□ 0.3
LDHA-205ENST00000422447 INSRP06213 1382 aa16.92■□□□□ 0.3
LDHA-205ENST00000422447 SLC12A5Q9H2X9 1139 aa16.91■□□□□ 0.3
LDHA-205ENST00000422447 PDE3BQ13370 1112 aa16.9■□□□□ 0.3
LDHA-205ENST00000422447 MYO5BQ9ULV0 1848 aa16.9■□□□□ 0.3
LDHA-205ENST00000422447 WDR43Q15061 677 aaKnown RBP eCLIP16.89■□□□□ 0.295e-7■□□□□ 10.4
LDHA-205ENST00000422447 ZFYVE9O95405 1425 aa16.87■□□□□ 0.29
LDHA-205ENST00000422447 SAFB2Q14151 953 aaKnown RBP eCLIP16.87■□□□□ 0.29
LDHA-205ENST00000422447 STK26Q9P289 416 aa16.87■□□□□ 0.29
LDHA-205ENST00000422447 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
LDHA-205ENST00000422447 RCAN3Q9UKA8 241 aa16.86■□□□□ 0.29
LDHA-205ENST00000422447 QRICH2Q9H0J4 1663 aa16.86■□□□□ 0.29
LDHA-205ENST00000422447 TMEM131LA2VDJ0 1609 aa16.85■□□□□ 0.29
LDHA-205ENST00000422447 ZMYM3Q14202 1370 aa16.84■□□□□ 0.29
LDHA-205ENST00000422447 NSD3Q9BZ95 1437 aa16.84■□□□□ 0.29
LDHA-205ENST00000422447 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
LDHA-205ENST00000422447 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
LDHA-205ENST00000422447 EVC2Q86UK5 1308 aa16.83■□□□□ 0.29
LDHA-205ENST00000422447 RRP1P56182 461 aaKnown RBP16.83■□□□□ 0.28
LDHA-205ENST00000422447 SPATA31D1Q6ZQQ2 1576 aa16.83■□□□□ 0.28
LDHA-205ENST00000422447 CABP2Q9NPB3 220 aa16.82■□□□□ 0.28
LDHA-205ENST00000422447 STAG3Q9UJ98 1225 aa16.82■□□□□ 0.28
LDHA-205ENST00000422447 PLEKHH1Q9ULM0 1364 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms