RNA–Protein interactions for RNA: ENST00000421736.1

PLOD3-203, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-203ENST00000421736 SENP3Q9H4L4 574 aaPredicted RBP25.41■■□□□ 1.66
PLOD3-203ENST00000421736 NUTM2DQ5VT03 806 aaPredicted RBP25.4■■□□□ 1.66
PLOD3-203ENST00000421736 STRCP1A6NGW2 1772 aa25.39■■□□□ 1.66
PLOD3-203ENST00000421736 HRCP23327 699 aa25.38■■□□□ 1.65
PLOD3-203ENST00000421736 CERKQ8TCT0 537 aa25.38■■□□□ 1.65
PLOD3-203ENST00000421736 PPP1R15AO75807 674 aaPredicted RBP25.35■■□□□ 1.65
PLOD3-203ENST00000421736 ZNF326Q5BKZ1 582 aaKnown RBP25.35■■□□□ 1.65
PLOD3-203ENST00000421736 NEXMIFQ5QGS0 1516 aa25.35■■□□□ 1.65
PLOD3-203ENST00000421736 CCDC144AA2RUR9 1427 aa25.35■■□□□ 1.65
PLOD3-203ENST00000421736 PLEKHG1Q9ULL1 1385 aa25.34■■□□□ 1.65
PLOD3-203ENST00000421736 SLC26A8Q96RN1 970 aa25.33■■□□□ 1.65
PLOD3-203ENST00000421736 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.31■■□□□ 1.64
PLOD3-203ENST00000421736 HDGFP51858 240 aaKnown RBP25.29■■□□□ 1.64
PLOD3-203ENST00000421736 TRIM26Q12899 539 aaPredicted RBP25.29■■□□□ 1.64
PLOD3-203ENST00000421736 BCANQ96GW7 911 aa25.29■■□□□ 1.64
PLOD3-203ENST00000421736 NRXN3Q9Y4C0 1643 aa25.29■■□□□ 1.64
PLOD3-203ENST00000421736 PPLO60437 1756 aa25.28■■□□□ 1.64
PLOD3-203ENST00000421736 CPS1P31327 1500 aa25.28■■□□□ 1.64
PLOD3-203ENST00000421736 SPATA31E1Q6ZUB1 1445 aa25.27■■□□□ 1.64
PLOD3-203ENST00000421736 ADAMTS13Q76LX8 1427 aa25.27■■□□□ 1.64
PLOD3-203ENST00000421736 ANKRD30BQ9BXX2 1392 aa25.26■■□□□ 1.63
PLOD3-203ENST00000421736 IFT172Q9UG01 1749 aa25.23■■□□□ 1.63
PLOD3-203ENST00000421736 SETBP1Q9Y6X0 1596 aa25.23■■□□□ 1.63
PLOD3-203ENST00000421736 ILDR1Q86SU0 546 aaPredicted RBP25.22■■□□□ 1.63
PLOD3-203ENST00000421736 DIP2AQ14689 1571 aa25.22■■□□□ 1.63
PLOD3-203ENST00000421736 IQSEC2Q5JU85 1478 aa25.21■■□□□ 1.63
PLOD3-203ENST00000421736 RGL3Q3MIN7 710 aa25.21■■□□□ 1.63
PLOD3-203ENST00000421736 NWD1Q149M9 1564 aa25.21■■□□□ 1.63
PLOD3-203ENST00000421736 LRRC7Q96NW7 1537 aa25.21■■□□□ 1.63
PLOD3-203ENST00000421736 CHD2O14647 1828 aaKnown RBP25.21■■□□□ 1.63
PLOD3-203ENST00000421736 FBXO41Q8TF61 875 aa25.2■■□□□ 1.62
PLOD3-203ENST00000421736 XIRP1Q702N8 1843 aaKnown RBP25.19■■□□□ 1.62
PLOD3-203ENST00000421736 TBX22Q9Y458 520 aa25.18■■□□□ 1.62
PLOD3-203ENST00000421736 RPGRIP1LQ68CZ1 1315 aa25.17■■□□□ 1.62
PLOD3-203ENST00000421736 KCNA6P17658 529 aa25.16■■□□□ 1.62
PLOD3-203ENST00000421736 SETD1AO15047 1707 aaKnown RBP25.15■■□□□ 1.62
PLOD3-203ENST00000421736 PTPRUQ92729 1446 aa25.13■■□□□ 1.61
PLOD3-203ENST00000421736 VGFO15240 615 aaPredicted RBP25.13■■□□□ 1.61
PLOD3-203ENST00000421736 NKTRP30414 1462 aaKnown RBP25.12■■□□□ 1.61
PLOD3-203ENST00000421736 ADGRF5Q8IZF2 1346 aa25.12■■□□□ 1.61
PLOD3-203ENST00000421736 METP08581 1390 aa25.11■■□□□ 1.61
PLOD3-203ENST00000421736 RBM33Q96EV2 1170 aaKnown RBP25.1■■□□□ 1.61
PLOD3-203ENST00000421736 ALKQ9UM73 1620 aa25.1■■□□□ 1.61
PLOD3-203ENST00000421736 XRN1Q8IZH2 1706 aaKnown RBP25.09■■□□□ 1.61
PLOD3-203ENST00000421736 PIK3R4Q99570 1358 aa25.08■■□□□ 1.61
PLOD3-203ENST00000421736 TMEM94Q12767 1356 aa25.07■■□□□ 1.6
PLOD3-203ENST00000421736 DHX57Q6P158 1386 aaKnown RBP25.06■■□□□ 1.6
PLOD3-203ENST00000421736 PROSER2Q86WR7 435 aaPredicted RBP25.06■■□□□ 1.6
PLOD3-203ENST00000421736 UBAP1LF5GYI3 381 aa25.05■■□□□ 1.6
PLOD3-203ENST00000421736 PIK3C2GO75747 1445 aa25.04■■□□□ 1.6
PLOD3-203ENST00000421736 MYOM2P54296 1465 aa25.04■■□□□ 1.6
PLOD3-203ENST00000421736 AMOTL2Q9Y2J4 779 aa25.04■■□□□ 1.6
PLOD3-203ENST00000421736 NRXN1Q9ULB1 1477 aa25.02■■□□□ 1.6
PLOD3-203ENST00000421736 ASXL1Q8IXJ9 1541 aa25■■□□□ 1.59
PLOD3-203ENST00000421736 PCGF6Q9BYE7 350 aa24.97■■□□□ 1.59
PLOD3-203ENST00000421736 DCAF11Q8TEB1 546 aa24.96■■□□□ 1.59
PLOD3-203ENST00000421736 SIN3AQ96ST3 1273 aa24.96■■□□□ 1.59
PLOD3-203ENST00000421736 KDM2AQ9Y2K7 1162 aa24.95■■□□□ 1.58
PLOD3-203ENST00000421736 TOM1O60784 492 aa24.94■■□□□ 1.58
PLOD3-203ENST00000421736 PIP4K2BP78356 416 aa24.94■■□□□ 1.58
PLOD3-203ENST00000421736 LAMC1P11047 1609 aa24.94■■□□□ 1.58
PLOD3-203ENST00000421736 SCAF1Q9H7N4 1312 aaKnown RBP24.92■■□□□ 1.58
PLOD3-203ENST00000421736 TMEM132EQ6IEE7 984 aa24.92■■□□□ 1.58
PLOD3-203ENST00000421736 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.92■■□□□ 1.58
PLOD3-203ENST00000421736 ROBO2Q9HCK4 1378 aa24.92■■□□□ 1.58
PLOD3-203ENST00000421736 CFAP70Q5T0N1 1121 aa24.91■■□□□ 1.58
PLOD3-203ENST00000421736 MSH6P52701 1360 aa24.91■■□□□ 1.58
PLOD3-203ENST00000421736 NALCNQ8IZF0 1738 aa24.9■■□□□ 1.58
PLOD3-203ENST00000421736 PTCH1Q13635 1447 aa24.9■■□□□ 1.58
PLOD3-203ENST00000421736 NCOA3Q9Y6Q9 1424 aa24.9■■□□□ 1.58
PLOD3-203ENST00000421736 C14orf93Q9H972 538 aaKnown RBP24.9■■□□□ 1.58
PLOD3-203ENST00000421736 PRAG1Q86YV5 1406 aa24.89■■□□□ 1.58
PLOD3-203ENST00000421736 NEUROD1Q13562 356 aa24.88■■□□□ 1.57
PLOD3-203ENST00000421736 C14orf37Q86TY3 774 aa24.88■■□□□ 1.57
PLOD3-203ENST00000421736 KNDC1Q76NI1 1749 aa24.88■■□□□ 1.57
PLOD3-203ENST00000421736 LRPPRCP42704 1394 aaKnown RBP24.86■■□□□ 1.57
PLOD3-203ENST00000421736 STK26Q9P289 416 aa24.86■■□□□ 1.57
PLOD3-203ENST00000421736 YTHDC2Q9H6S0 1430 aaKnown RBP24.86■■□□□ 1.57
PLOD3-203ENST00000421736 ADGRB1O14514 1584 aa24.85■■□□□ 1.57
PLOD3-203ENST00000421736 TECPR2O15040 1411 aa24.84■■□□□ 1.57
PLOD3-203ENST00000421736 ADGRL3Q9HAR2 1447 aa24.83■■□□□ 1.57
PLOD3-203ENST00000421736 L3MBTL2Q969R5 705 aa24.82■■□□□ 1.56
PLOD3-203ENST00000421736 C19orf44Q9H6X5 657 aa24.82■■□□□ 1.56
PLOD3-203ENST00000421736 ROBO1Q9Y6N7 1651 aa24.81■■□□□ 1.56
PLOD3-203ENST00000421736 STAC3Q96MF2 364 aa24.81■■□□□ 1.56
PLOD3-203ENST00000421736 ABCC11Q96J66 1382 aa24.8■■□□□ 1.56
PLOD3-203ENST00000421736 PLEKHH1Q9ULM0 1364 aa24.8■■□□□ 1.56
PLOD3-203ENST00000421736 WAPLQ7Z5K2 1190 aa24.78■■□□□ 1.56
PLOD3-203ENST00000421736 DCCP43146 1447 aa24.78■■□□□ 1.56
PLOD3-203ENST00000421736 HSPA1LP34931 641 aa24.77■■□□□ 1.56
PLOD3-203ENST00000421736 SLAIN2Q9P270 581 aa24.77■■□□□ 1.56
PLOD3-203ENST00000421736 KIAA1210Q9ULL0 1709 aa24.76■■□□□ 1.55
PLOD3-203ENST00000421736 ATF3P18847 181 aa24.76■■□□□ 1.55
PLOD3-203ENST00000421736 FAM135BQ49AJ0 1406 aa24.76■■□□□ 1.55
PLOD3-203ENST00000421736 CADPS2Q86UW7 1296 aa24.75■■□□□ 1.55
PLOD3-203ENST00000421736 MST1RQ04912 1400 aa24.73■■□□□ 1.55
PLOD3-203ENST00000421736 DLC1Q96QB1 1528 aa24.72■■□□□ 1.55
PLOD3-203ENST00000421736 CDC42BPGQ6DT37 1551 aa24.71■■□□□ 1.55
PLOD3-203ENST00000421736 ARHGEF28Q8N1W1 1705 aaKnown RBP24.7■■□□□ 1.54
PLOD3-203ENST00000421736 TRAK1Q9UPV9 953 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms