RNA–Protein interactions for RNA: ENST00000419642.1

ZDHHC3-204, Transcript of zinc finger DHHC-type containing 3, humanhuman

TSL 5

Gene ZDHHC3, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-204ENST00000419642 NOS1P29475 1434 aa21.8■■□□□ 1.08
ZDHHC3-204ENST00000419642 DAPK1P53355 1430 aa21.78■■□□□ 1.08
ZDHHC3-204ENST00000419642 SHPRHQ149N8 1683 aa21.78■■□□□ 1.08
ZDHHC3-204ENST00000419642 GCC2Q8IWJ2 1684 aa21.78■■□□□ 1.08
ZDHHC3-204ENST00000419642 BCANQ96GW7 911 aa21.77■■□□□ 1.08
ZDHHC3-204ENST00000419642 LRP6O75581 1613 aa21.76■■□□□ 1.07
ZDHHC3-204ENST00000419642 FGD6Q6ZV73 1430 aa21.75■■□□□ 1.07
ZDHHC3-204ENST00000419642 SLC52A1Q9NWF4 448 aa21.74■■□□□ 1.07
ZDHHC3-204ENST00000419642 SPATA31A6Q5VVP1 1343 aa21.74■■□□□ 1.07
ZDHHC3-204ENST00000419642 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.73■■□□□ 1.07
ZDHHC3-204ENST00000419642 AHDC1Q5TGY3 1603 aaPredicted RBP21.73■■□□□ 1.07
ZDHHC3-204ENST00000419642 PLEKHG1Q9ULL1 1385 aa21.73■■□□□ 1.07
ZDHHC3-204ENST00000419642 ZFYVE9O95405 1425 aa21.72■■□□□ 1.07
ZDHHC3-204ENST00000419642 ZNF772Q68DY9 489 aaPredicted RBP21.72■■□□□ 1.07
ZDHHC3-204ENST00000419642 UPF1Q92900 1129 aaKnown RBP eCLIP21.72■■□□□ 1.07
ZDHHC3-204ENST00000419642 ANKRD30AQ9BXX3 1397 aa21.72■■□□□ 1.07
ZDHHC3-204ENST00000419642 NCOA3Q9Y6Q9 1424 aa21.72■■□□□ 1.07
ZDHHC3-204ENST00000419642 MEX3CQ5U5Q3 659 aaKnown RBP21.71■■□□□ 1.07
ZDHHC3-204ENST00000419642 TMEM131LA2VDJ0 1609 aa21.7■■□□□ 1.06
ZDHHC3-204ENST00000419642 RPRD2Q5VT52 1461 aaKnown RBP21.7■■□□□ 1.06
ZDHHC3-204ENST00000419642 TRIM52Q96A61 297 aa21.68■■□□□ 1.06
ZDHHC3-204ENST00000419642 RIMS2Q9UQ26 1411 aa21.67■■□□□ 1.06
ZDHHC3-204ENST00000419642 PPP1R15AO75807 674 aaPredicted RBP21.66■■□□□ 1.06
ZDHHC3-204ENST00000419642 HDGFP51858 240 aaKnown RBP21.66■■□□□ 1.06
ZDHHC3-204ENST00000419642 DIP2AQ14689 1571 aa21.65■■□□□ 1.06
ZDHHC3-204ENST00000419642 CHIC2Q9UKJ5 165 aa21.65■■□□□ 1.06
ZDHHC3-204ENST00000419642 C14orf37Q86TY3 774 aa21.64■■□□□ 1.05
ZDHHC3-204ENST00000419642 TBX22Q9Y458 520 aa21.64■■□□□ 1.05
ZDHHC3-204ENST00000419642 CDK12Q9NYV4 1490 aaPredicted RBP21.64■■□□□ 1.05
ZDHHC3-204ENST00000419642 CADPS2Q86UW7 1296 aa21.63■■□□□ 1.05
ZDHHC3-204ENST00000419642 ADGRL2O95490 1459 aa21.61■■□□□ 1.05
ZDHHC3-204ENST00000419642 RXRBP28702 533 aa21.61■■□□□ 1.05
ZDHHC3-204ENST00000419642 ATF3P18847 181 aa21.6■■□□□ 1.05
ZDHHC3-204ENST00000419642 C19orf44Q9H6X5 657 aa21.6■■□□□ 1.05
ZDHHC3-204ENST00000419642 ADAMTS13Q76LX8 1427 aa21.59■■□□□ 1.05
ZDHHC3-204ENST00000419642 PIK3R4Q99570 1358 aa21.59■■□□□ 1.05
ZDHHC3-204ENST00000419642 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.58■■□□□ 1.05
ZDHHC3-204ENST00000419642 TRPM2O94759 1503 aa21.57■■□□□ 1.04
ZDHHC3-204ENST00000419642 NHSL1Q5SYE7 1610 aa21.57■■□□□ 1.04
ZDHHC3-204ENST00000419642 E9PCH4 1651 aa21.56■■□□□ 1.04
ZDHHC3-204ENST00000419642 UNC13BO14795 1591 aa21.55■■□□□ 1.04
ZDHHC3-204ENST00000419642 ANKRD50Q9ULJ7 1429 aa21.55■■□□□ 1.04
ZDHHC3-204ENST00000419642 NUTM2BA6NNL0 878 aaPredicted RBP21.54■■□□□ 1.04
ZDHHC3-204ENST00000419642 NUTM2EB1AL46 878 aaPredicted RBP21.54■■□□□ 1.04
ZDHHC3-204ENST00000419642 APLP2Q06481 763 aa21.54■■□□□ 1.04
ZDHHC3-204ENST00000419642 NUTM2AQ8IVF1 878 aaPredicted RBP21.54■■□□□ 1.04
ZDHHC3-204ENST00000419642 ASXL1Q8IXJ9 1541 aa21.54■■□□□ 1.04
ZDHHC3-204ENST00000419642 BRINP3Q76B58 766 aa21.53■■□□□ 1.04
ZDHHC3-204ENST00000419642 DCCP43146 1447 aa21.53■■□□□ 1.04
ZDHHC3-204ENST00000419642 CHGAP10645 457 aaKnown RBP21.52■■□□□ 1.04
ZDHHC3-204ENST00000419642 AFF2P51816 1311 aa21.52■■□□□ 1.03
ZDHHC3-204ENST00000419642 LOC105371045A0A1W2PR82 267 aa21.51■■□□□ 1.03
ZDHHC3-204ENST00000419642 SETD5Q9C0A6 1442 aa21.51■■□□□ 1.03
ZDHHC3-204ENST00000419642 XRN1Q8IZH2 1706 aaKnown RBP21.51■■□□□ 1.03
ZDHHC3-204ENST00000419642 NUTM2DQ5VT03 806 aaPredicted RBP21.5■■□□□ 1.03
ZDHHC3-204ENST00000419642 PTPRUQ92729 1446 aa21.48■■□□□ 1.03
ZDHHC3-204ENST00000419642 AMOTL2Q9Y2J4 779 aa21.48■■□□□ 1.03
ZDHHC3-204ENST00000419642 RGS12O14924 1447 aa21.47■■□□□ 1.03
ZDHHC3-204ENST00000419642 IQGAP3Q86VI3 1631 aa21.47■■□□□ 1.03
ZDHHC3-204ENST00000419642 NRXN3Q9Y4C0 1643 aa21.47■■□□□ 1.03
ZDHHC3-204ENST00000419642 MST1RQ04912 1400 aa21.46■■□□□ 1.03
ZDHHC3-204ENST00000419642 RBM6P78332 1123 aaKnown RBP21.44■■□□□ 1.02
ZDHHC3-204ENST00000419642 LRRC59Q96AG4 307 aaKnown RBP21.43■■□□□ 1.02
ZDHHC3-204ENST00000419642 SETBP1Q9Y6X0 1596 aa21.43■■□□□ 1.02
ZDHHC3-204ENST00000419642 C8orf37Q96NL8 207 aa21.42■■□□□ 1.02
ZDHHC3-204ENST00000419642 NALCNQ8IZF0 1738 aa21.41■■□□□ 1.02
ZDHHC3-204ENST00000419642 FAM50AQ14320 339 aaKnown RBP21.41■■□□□ 1.02
ZDHHC3-204ENST00000419642 QTRT2Q9H974 415 aaKnown RBP21.41■■□□□ 1.02
ZDHHC3-204ENST00000419642 PNPLA6Q8IY17 1366 aa21.4■■□□□ 1.02
ZDHHC3-204ENST00000419642 SPHKAPQ2M3C7 1700 aa21.38■■□□□ 1.01
ZDHHC3-204ENST00000419642 LAMC1P11047 1609 aa21.37■■□□□ 1.01
ZDHHC3-204ENST00000419642 ADGRL3Q9HAR2 1447 aa21.37■■□□□ 1.01
ZDHHC3-204ENST00000419642 NGLY1Q96IV0 654 aa21.35■■□□□ 1.01
ZDHHC3-204ENST00000419642 ATAD2Q6PL18 1390 aa21.35■■□□□ 1.01
ZDHHC3-204ENST00000419642 DDX17Q92841 729 aaKnown RBP21.33■■□□□ 1.01
ZDHHC3-204ENST00000419642 METP08581 1390 aa21.32■■□□□ 1
ZDHHC3-204ENST00000419642 ADAMTS2O95450 1211 aa21.3■■□□□ 1
ZDHHC3-204ENST00000419642 FOXD1Q16676 465 aa21.3■■□□□ 1
ZDHHC3-204ENST00000419642 ROCK1Q13464 1354 aa21.3■■□□□ 1
ZDHHC3-204ENST00000419642 NUP155O75694 1391 aa21.29■■□□□ 1
ZDHHC3-204ENST00000419642 MARF1Q9Y4F3 1742 aaKnown RBP21.29■■□□□ 1
ZDHHC3-204ENST00000419642 C1orf167Q5SNV9 1468 aa21.28■■□□□ 1
ZDHHC3-204ENST00000419642 COL22A1Q8NFW1 1626 aaPredicted RBP21.28■■□□□ 1
ZDHHC3-204ENST00000419642 KIF1BO60333 1816 aa21.27■■□□□ 1
ZDHHC3-204ENST00000419642 NEXMIFQ5QGS0 1516 aa21.26■□□□□ 0.99
ZDHHC3-204ENST00000419642 ZRANB1Q9UGI0 708 aa21.26■□□□□ 0.99
ZDHHC3-204ENST00000419642 USP21Q9UK80 565 aa21.26■□□□□ 0.99
ZDHHC3-204ENST00000419642 TRPC5Q9UL62 973 aaPredicted RBP21.26■□□□□ 0.99
ZDHHC3-204ENST00000419642 PTCH1Q13635 1447 aa21.26■□□□□ 0.99
ZDHHC3-204ENST00000419642 ZNF326Q5BKZ1 582 aaKnown RBP21.25■□□□□ 0.99
ZDHHC3-204ENST00000419642 ATRNO75882 1429 aa21.23■□□□□ 0.99
ZDHHC3-204ENST00000419642 SOS2Q07890 1332 aaPredicted RBP21.23■□□□□ 0.99
ZDHHC3-204ENST00000419642 CLTCL1P53675 1640 aa21.22■□□□□ 0.99
ZDHHC3-204ENST00000419642 FNBP4Q8N3X1 1017 aaPredicted RBP21.22■□□□□ 0.99
ZDHHC3-204ENST00000419642 CCDC125Q86Z20 511 aa21.18■□□□□ 0.98
ZDHHC3-204ENST00000419642 ORAI2Q96SN7 254 aa21.18■□□□□ 0.98
ZDHHC3-204ENST00000419642 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.18■□□□□ 0.98
ZDHHC3-204ENST00000419642 MYOM2P54296 1465 aa21.15■□□□□ 0.98
ZDHHC3-204ENST00000419642 PRAG1Q86YV5 1406 aa21.14■□□□□ 0.98
ZDHHC3-204ENST00000419642 ROBO2Q9HCK4 1378 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms