RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 PPM1GO15355 546 aaPredicted RBP18.31■□□□□ 0.52
CCT6P3-201ENST00000419314 GPRASP1Q5JY77 1395 aa18.29■□□□□ 0.52
CCT6P3-201ENST00000419314 RCAN3Q9UKA8 241 aa18.29■□□□□ 0.52
CCT6P3-201ENST00000419314 SCAF11Q99590 1463 aaKnown RBP18.29■□□□□ 0.52
CCT6P3-201ENST00000419314 UNC13BO14795 1591 aa18.29■□□□□ 0.52
CCT6P3-201ENST00000419314 IQGAP3Q86VI3 1631 aa18.28■□□□□ 0.52
CCT6P3-201ENST00000419314 ERICH6Q7L0X2 663 aa18.28■□□□□ 0.52
CCT6P3-201ENST00000419314 SLC52A1Q9NWF4 448 aa18.28■□□□□ 0.52
CCT6P3-201ENST00000419314 YEATS2Q9ULM3 1422 aa18.26■□□□□ 0.51
CCT6P3-201ENST00000419314 ARAP3Q8WWN8 1544 aa18.26■□□□□ 0.51
CCT6P3-201ENST00000419314 ABCA9Q8IUA7 1624 aa18.25■□□□□ 0.51
CCT6P3-201ENST00000419314 CANXP27824 592 aaKnown RBP18.25■□□□□ 0.51
CCT6P3-201ENST00000419314 EVC2Q86UK5 1308 aa18.25■□□□□ 0.51
CCT6P3-201ENST00000419314 C14orf93Q9H972 538 aaKnown RBP18.25■□□□□ 0.51
CCT6P3-201ENST00000419314 NPATQ14207 1427 aa18.24■□□□□ 0.51
CCT6P3-201ENST00000419314 PLIN1O60240 522 aa18.24■□□□□ 0.51
CCT6P3-201ENST00000419314 U2SURPO15042 1029 aaKnown RBP18.24■□□□□ 0.51
CCT6P3-201ENST00000419314 CFAP53Q96M91 514 aa18.24■□□□□ 0.51
CCT6P3-201ENST00000419314 APAF1O14727 1248 aa18.23■□□□□ 0.51
CCT6P3-201ENST00000419314 PRAM1Q96QH2 718 aa18.23■□□□□ 0.51
CCT6P3-201ENST00000419314 PTPRTO14522 1441 aa18.23■□□□□ 0.51
CCT6P3-201ENST00000419314 RPGRIP1LQ68CZ1 1315 aa18.22■□□□□ 0.51
CCT6P3-201ENST00000419314 COL17A1Q9UMD9 1497 aaPredicted RBP18.22■□□□□ 0.51
CCT6P3-201ENST00000419314 NUTM2FA1L443 756 aa18.21■□□□□ 0.51
CCT6P3-201ENST00000419314 RRP7AQ9Y3A4 280 aaKnown RBP18.21■□□□□ 0.51
CCT6P3-201ENST00000419314 AMER1Q5JTC6 1135 aaPredicted RBP18.21■□□□□ 0.51
CCT6P3-201ENST00000419314 PRDM15P57071 1507 aaPredicted RBP18.2■□□□□ 0.5
CCT6P3-201ENST00000419314 PARD3Q8TEW0 1356 aa18.19■□□□□ 0.5
CCT6P3-201ENST00000419314 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.19■□□□□ 0.56e-6■□□□□ 8.5
CCT6P3-201ENST00000419314 TRPM2O94759 1503 aa18.19■□□□□ 0.5
CCT6P3-201ENST00000419314 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
CCT6P3-201ENST00000419314 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.51e-10■■■□□ 15.5
CCT6P3-201ENST00000419314 EIF2AK4Q9P2K8 1649 aaKnown RBP18.18■□□□□ 0.5
CCT6P3-201ENST00000419314 PDE3BQ13370 1112 aa18.18■□□□□ 0.5
CCT6P3-201ENST00000419314 GGNBP2Q9H3C7 697 aa18.18■□□□□ 0.5
CCT6P3-201ENST00000419314 NEO1Q92859 1461 aa18.18■□□□□ 0.5
CCT6P3-201ENST00000419314 MLH3Q9UHC1 1453 aa18.18■□□□□ 0.5
CCT6P3-201ENST00000419314 RBM19Q9Y4C8 960 aaKnown RBP18.18■□□□□ 0.5
CCT6P3-201ENST00000419314 E9PCH4 1651 aa18.17■□□□□ 0.5
CCT6P3-201ENST00000419314 MAGI2Q86UL8 1455 aa18.17■□□□□ 0.5
CCT6P3-201ENST00000419314 GOLGA2Q08379 1002 aa18.16■□□□□ 0.5
CCT6P3-201ENST00000419314 ERICH6BQ5W0A0 696 aa18.16■□□□□ 0.5
CCT6P3-201ENST00000419314 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
CCT6P3-201ENST00000419314 CARD14Q9BXL6 1004 aa18.16■□□□□ 0.5
CCT6P3-201ENST00000419314 CLTCL1P53675 1640 aa18.15■□□□□ 0.5
CCT6P3-201ENST00000419314 HDGFL2Q7Z4V5 671 aaPredicted RBP18.15■□□□□ 0.5
CCT6P3-201ENST00000419314 EXOC6Q8TAG9 804 aa18.15■□□□□ 0.5
CCT6P3-201ENST00000419314 NEFMP07197 916 aa18.14■□□□□ 0.5
CCT6P3-201ENST00000419314 MTHFSP49914 203 aa18.14■□□□□ 0.5
CCT6P3-201ENST00000419314 WAPLQ7Z5K2 1190 aa18.14■□□□□ 0.5
CCT6P3-201ENST00000419314 TERF2IPQ9NYB0 399 aa18.14■□□□□ 0.5
CCT6P3-201ENST00000419314 TRPM1Q7Z4N2 1603 aa18.14■□□□□ 0.49
CCT6P3-201ENST00000419314 HDGFP51858 240 aaKnown RBP18.14■□□□□ 0.49
CCT6P3-201ENST00000419314 RRP1P56182 461 aaKnown RBP18.14■□□□□ 0.49
CCT6P3-201ENST00000419314 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.49
CCT6P3-201ENST00000419314 SOX12O15370 315 aa18.13■□□□□ 0.49
CCT6P3-201ENST00000419314 INO80Q9ULG1 1556 aaPredicted RBP18.12■□□□□ 0.49
CCT6P3-201ENST00000419314 CEBPAP49715 358 aaPredicted RBP18.12■□□□□ 0.49
CCT6P3-201ENST00000419314 TET3O43151 1660 aa18.12■□□□□ 0.49
CCT6P3-201ENST00000419314 NSD3Q9BZ95 1437 aa18.12■□□□□ 0.49
CCT6P3-201ENST00000419314 TXNDC2Q86VQ3 553 aa18.12■□□□□ 0.49
CCT6P3-201ENST00000419314 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.12■□□□□ 0.49
CCT6P3-201ENST00000419314 PLEKHG5O94827 1062 aa18.11■□□□□ 0.49
CCT6P3-201ENST00000419314 KIDINS220Q9ULH0 1771 aa18.1■□□□□ 0.49
CCT6P3-201ENST00000419314 NPM2Q86SE8 214 aaKnown RBP18.1■□□□□ 0.49
CCT6P3-201ENST00000419314 FRAT1Q92837 279 aaPredicted RBP18.1■□□□□ 0.49
CCT6P3-201ENST00000419314 TSPOAP1O95153 1857 aa18.1■□□□□ 0.49
CCT6P3-201ENST00000419314 HECW2Q9P2P5 1572 aa18.09■□□□□ 0.49
CCT6P3-201ENST00000419314 CDK19Q9BWU1 502 aa18.09■□□□□ 0.49
CCT6P3-201ENST00000419314 CABP1Q9NZU7 370 aa18.09■□□□□ 0.49
CCT6P3-201ENST00000419314 EFCAB6Q5THR3 1501 aa18.08■□□□□ 0.49
CCT6P3-201ENST00000419314 SPHKAPQ2M3C7 1700 aa18.07■□□□□ 0.48
CCT6P3-201ENST00000419314 MAPK8IP3Q9UPT6 1336 aa18.07■□□□□ 0.48
CCT6P3-201ENST00000419314 LRPPRCP42704 1394 aaKnown RBP18.06■□□□□ 0.48
CCT6P3-201ENST00000419314 CFAP74Q9C0B2 1584 aa18.05■□□□□ 0.48
CCT6P3-201ENST00000419314 LAS1LQ9Y4W2 734 aaKnown RBP18.05■□□□□ 0.48
CCT6P3-201ENST00000419314 SLC26A8Q96RN1 970 aa18.05■□□□□ 0.48
CCT6P3-201ENST00000419314 CRBNQ96SW2 442 aa18.04■□□□□ 0.48
CCT6P3-201ENST00000419314 ABCC3O15438 1527 aa18.04■□□□□ 0.48
CCT6P3-201ENST00000419314 EID1Q9Y6B2 187 aa18.03■□□□□ 0.48
CCT6P3-201ENST00000419314 CEP152O94986 1710 aa18.03■□□□□ 0.48
CCT6P3-201ENST00000419314 RNF17Q9BXT8 1623 aaKnown RBP18.02■□□□□ 0.48
CCT6P3-201ENST00000419314 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.02■□□□□ 0.48
CCT6P3-201ENST00000419314 BCL11AQ9H165 835 aa18.02■□□□□ 0.47
CCT6P3-201ENST00000419314 ASXL1Q8IXJ9 1541 aa18.01■□□□□ 0.47
CCT6P3-201ENST00000419314 C14orf37Q86TY3 774 aa18.01■□□□□ 0.47
CCT6P3-201ENST00000419314 TCP11L2Q8N4U5 519 aa18.01■□□□□ 0.47
CCT6P3-201ENST00000419314 PPRC1Q5VV67 1664 aaKnown RBP18.01■□□□□ 0.47
CCT6P3-201ENST00000419314 BCL2L13Q9BXK5 485 aa18.01■□□□□ 0.47
CCT6P3-201ENST00000419314 MADDQ8WXG6 1647 aa18.01■□□□□ 0.47
CCT6P3-201ENST00000419314 FBLN1P23142 703 aa18.01■□□□□ 0.47
CCT6P3-201ENST00000419314 KIF1BO60333 1816 aa17.99■□□□□ 0.47
CCT6P3-201ENST00000419314 ERVK-7P63135 1459 aa17.99■□□□□ 0.47
CCT6P3-201ENST00000419314 RUNDC1Q96C34 613 aa17.98■□□□□ 0.47
CCT6P3-201ENST00000419314 MYOM2P54296 1465 aa17.98■□□□□ 0.47
CCT6P3-201ENST00000419314 PPP6R1Q9UPN7 881 aa17.97■□□□□ 0.47
CCT6P3-201ENST00000419314 ABCA6Q8N139 1617 aa17.97■□□□□ 0.47
CCT6P3-201ENST00000419314 E9PSI1 815 aa17.97■□□□□ 0.47
CCT6P3-201ENST00000419314 RIMBP3CA6NJZ7 1639 aa17.96■□□□□ 0.47
CCT6P3-201ENST00000419314 RIMBP3BA6NNM3 1639 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms