RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 RGPD1P0DJD0 1748 aa6.3□□□□□ -1.4
GPCPD1-202ENST00000418646 JPH4Q96JJ6 628 aa6.3□□□□□ -1.4
GPCPD1-202ENST00000418646 COL3A1P02461 1466 aaPredicted RBP6.3□□□□□ -1.4
GPCPD1-202ENST00000418646 ARHGAP31Q2M1Z3 1444 aa6.29□□□□□ -1.4
GPCPD1-202ENST00000418646 NLRP1Q9C000 1473 aa6.29□□□□□ -1.4
GPCPD1-202ENST00000418646 NUP155O75694 1391 aa6.29□□□□□ -1.4
GPCPD1-202ENST00000418646 MSH5O43196 834 aa6.29□□□□□ -1.4
GPCPD1-202ENST00000418646 NOS1P29475 1434 aa6.29□□□□□ -1.4
GPCPD1-202ENST00000418646 SLC24A1O60721 1099 aa6.29□□□□□ -1.4
GPCPD1-202ENST00000418646 EIF4G2P78344 907 aaKnown RBP eCLIP6.29□□□□□ -1.4
GPCPD1-202ENST00000418646 PNISRQ8TF01 805 aaKnown RBP6.29□□□□□ -1.4
GPCPD1-202ENST00000418646 ADGRL1O94910 1474 aa6.28□□□□□ -1.4
GPCPD1-202ENST00000418646 MED14O60244 1454 aa6.28□□□□□ -1.4
GPCPD1-202ENST00000418646 SCAF11Q99590 1463 aaKnown RBP6.28□□□□□ -1.4
GPCPD1-202ENST00000418646 ZFYVE9O95405 1425 aa6.28□□□□□ -1.4
GPCPD1-202ENST00000418646 TULP4Q9NRJ4 1543 aa6.28□□□□□ -1.4
GPCPD1-202ENST00000418646 DISP3Q9P2K9 1392 aa6.27□□□□□ -1.41
GPCPD1-202ENST00000418646 C3P01024 1663 aa6.26□□□□□ -1.41
GPCPD1-202ENST00000418646 TRMT2AQ8IZ69 625 aaKnown RBP6.26□□□□□ -1.41
GPCPD1-202ENST00000418646 RRP7BPQ9NSQ0 103 aa6.26□□□□□ -1.41
GPCPD1-202ENST00000418646 AGLP35573 1532 aa6.26□□□□□ -1.41
GPCPD1-202ENST00000418646 OSCARQ8IYS5 282 aa6.26□□□□□ -1.41
GPCPD1-202ENST00000418646 LRRC7Q96NW7 1537 aa6.26□□□□□ -1.41
GPCPD1-202ENST00000418646 DLC1Q96QB1 1528 aa6.26□□□□□ -1.41
GPCPD1-202ENST00000418646 POGZQ7Z3K3 1410 aa6.26□□□□□ -1.41
GPCPD1-202ENST00000418646 ANP32CO43423 234 aa6.25□□□□□ -1.41
GPCPD1-202ENST00000418646 SPATA31D1Q6ZQQ2 1576 aa6.25□□□□□ -1.41
GPCPD1-202ENST00000418646 ZMYM3Q14202 1370 aa6.24□□□□□ -1.41
GPCPD1-202ENST00000418646 KANK1Q14678 1352 aa6.24□□□□□ -1.41
GPCPD1-202ENST00000418646 STAC3Q96MF2 364 aa6.24□□□□□ -1.41
GPCPD1-202ENST00000418646 NEO1Q92859 1461 aa6.24□□□□□ -1.41
GPCPD1-202ENST00000418646 LRRC37A3O60309 1634 aa6.24□□□□□ -1.41
GPCPD1-202ENST00000418646 RANGAP1P46060 587 aaPredicted RBP6.24□□□□□ -1.41
GPCPD1-202ENST00000418646 NCBP3Q53F19 620 aaKnown RBP6.24□□□□□ -1.41
GPCPD1-202ENST00000418646 ANP32EQ9BTT0 268 aa6.24□□□□□ -1.41
GPCPD1-202ENST00000418646 ARHGEF40Q8TER5 1519 aa6.24□□□□□ -1.41
GPCPD1-202ENST00000418646 DLG5Q8TDM6 1919 aa6.24□□□□□ -1.41
GPCPD1-202ENST00000418646 CD163L1Q9NR16 1453 aa6.24□□□□□ -1.41
GPCPD1-202ENST00000418646 CDK11AQ9UQ88 783 aaPredicted RBP6.23□□□□□ -1.41
GPCPD1-202ENST00000418646 RBM19Q9Y4C8 960 aaKnown RBP6.23□□□□□ -1.41
GPCPD1-202ENST00000418646 YTHDC1Q96MU7 727 aaKnown RBP6.23□□□□□ -1.41
GPCPD1-202ENST00000418646 PHF23Q9BUL5 403 aaPredicted RBP6.22□□□□□ -1.41
GPCPD1-202ENST00000418646 PTPRMP28827 1452 aa6.22□□□□□ -1.41
GPCPD1-202ENST00000418646 PHRF1Q9P1Y6 1649 aaKnown RBP6.22□□□□□ -1.41
GPCPD1-202ENST00000418646 FMN2Q9NZ56 1722 aa6.22□□□□□ -1.41
GPCPD1-202ENST00000418646 MYBBP1AQ9BQG0 1328 aaKnown RBP6.22□□□□□ -1.41
GPCPD1-202ENST00000418646 CFDP1Q9UEE9 299 aaPredicted RBP6.22□□□□□ -1.41
GPCPD1-202ENST00000418646 KDM2BQ8NHM5 1336 aa6.21□□□□□ -1.41
GPCPD1-202ENST00000418646 FOXD1Q16676 465 aa6.21□□□□□ -1.42
GPCPD1-202ENST00000418646 DIP2AQ14689 1571 aa6.21□□□□□ -1.42
GPCPD1-202ENST00000418646 CPS1P31327 1500 aa6.21□□□□□ -1.42
GPCPD1-202ENST00000418646 ITGAEP38570 1179 aa6.2□□□□□ -1.42
GPCPD1-202ENST00000418646 ITSN1Q15811 1721 aa6.2□□□□□ -1.42
GPCPD1-202ENST00000418646 PKD2Q13563 968 aa6.2□□□□□ -1.42
GPCPD1-202ENST00000418646 NUDCQ9Y266 331 aa6.2□□□□□ -1.42
GPCPD1-202ENST00000418646 YEATS2Q9ULM3 1422 aa6.2□□□□□ -1.42
GPCPD1-202ENST00000418646 RALBP1Q15311 655 aa6.2□□□□□ -1.42
GPCPD1-202ENST00000418646 NPATQ14207 1427 aa6.2□□□□□ -1.42
GPCPD1-202ENST00000418646 PPP4R2Q9NY27 417 aa6.19□□□□□ -1.42
GPCPD1-202ENST00000418646 UBR1Q8IWV7 1749 aa6.19□□□□□ -1.42
GPCPD1-202ENST00000418646 CRYBG1Q9Y4K1 1723 aa6.19□□□□□ -1.42
GPCPD1-202ENST00000418646 AMER1Q5JTC6 1135 aaPredicted RBP6.18□□□□□ -1.42
GPCPD1-202ENST00000418646 SLC4A1APQ9BWU0 796 aaKnown RBP6.18□□□□□ -1.42
GPCPD1-202ENST00000418646 CAMTA1Q9Y6Y1 1673 aa6.18□□□□□ -1.42
GPCPD1-202ENST00000418646 HIRIP3Q9BW71 556 aaPredicted RBP6.18□□□□□ -1.42
GPCPD1-202ENST00000418646 FKBP8Q14318 412 aa6.17□□□□□ -1.42
GPCPD1-202ENST00000418646 PUS7Q96PZ0 661 aaKnown RBP6.17□□□□□ -1.42
GPCPD1-202ENST00000418646 ASXL2Q76L83 1435 aa6.17□□□□□ -1.42
GPCPD1-202ENST00000418646 POLR3AO14802 1390 aaPredicted RBP6.17□□□□□ -1.42
GPCPD1-202ENST00000418646 CHIC2Q9UKJ5 165 aa6.17□□□□□ -1.42
GPCPD1-202ENST00000418646 ADAMTS7Q9UKP4 1686 aa6.16□□□□□ -1.42
GPCPD1-202ENST00000418646 PLEKHH1Q9ULM0 1364 aa6.16□□□□□ -1.42
GPCPD1-202ENST00000418646 PDE3BQ13370 1112 aa6.16□□□□□ -1.42
GPCPD1-202ENST00000418646 PPIP5K1Q6PFW1 1433 aa6.16□□□□□ -1.42
GPCPD1-202ENST00000418646 EIF3AQ14152 1382 aaKnown RBP6.15□□□□□ -1.43
GPCPD1-202ENST00000418646 XRN1Q8IZH2 1706 aaKnown RBP6.15□□□□□ -1.43
GPCPD1-202ENST00000418646 ALKQ9UM73 1620 aa6.14□□□□□ -1.43
GPCPD1-202ENST00000418646 TECPR2O15040 1411 aa6.14□□□□□ -1.43
GPCPD1-202ENST00000418646 PLEKHD1A6NEE1 506 aa6.14□□□□□ -1.43
GPCPD1-202ENST00000418646 MAP2P11137 1827 aaKnown RBP6.14□□□□□ -1.43
GPCPD1-202ENST00000418646 ADAMTSL3P82987 1691 aa6.14□□□□□ -1.43
GPCPD1-202ENST00000418646 CHMP7Q8WUX9 453 aaPredicted RBP6.14□□□□□ -1.43
GPCPD1-202ENST00000418646 TRIM52Q96A61 297 aa6.14□□□□□ -1.43
GPCPD1-202ENST00000418646 PEAK1Q9H792 1746 aa6.13□□□□□ -1.43
GPCPD1-202ENST00000418646 FAM208AQ9UK61 1670 aaKnown RBP6.13□□□□□ -1.43
GPCPD1-202ENST00000418646 PNPLA6Q8IY17 1366 aa6.13□□□□□ -1.43
GPCPD1-202ENST00000418646 SIPA1L3O60292 1781 aaPredicted RBP6.13□□□□□ -1.43
GPCPD1-202ENST00000418646 ST20-MTHFSA0A0A6YYL1 179 aa6.12□□□□□ -1.43
GPCPD1-202ENST00000418646 NLRP13Q86W25 1043 aa6.12□□□□□ -1.43
GPCPD1-202ENST00000418646 ZNF142P52746 1687 aaPredicted RBP6.12□□□□□ -1.43
GPCPD1-202ENST00000418646 HNRNPMP52272 730 aaKnown RBP eCLIP6.12□□□□□ -1.435e-8■□□□□ 11
GPCPD1-202ENST00000418646 LMTK3Q96Q04 1460 aa6.12□□□□□ -1.43
GPCPD1-202ENST00000418646 NINLQ9Y2I6 1382 aa6.12□□□□□ -1.43
GPCPD1-202ENST00000418646 NKTRP30414 1462 aaKnown RBP6.11□□□□□ -1.43
GPCPD1-202ENST00000418646 MED1Q15648 1581 aaPredicted RBP6.11□□□□□ -1.43
GPCPD1-202ENST00000418646 NBPF1Q3BBV0 1214 aa6.11□□□□□ -1.43
GPCPD1-202ENST00000418646 CACNA1FO60840 1977 aa6.11□□□□□ -1.43
GPCPD1-202ENST00000418646 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.11□□□□□ -1.43
GPCPD1-202ENST00000418646 RRP1P56182 461 aaKnown RBP6.1□□□□□ -1.43
GPCPD1-202ENST00000418646 HNRNPUQ00839 825 aaKnown RBP eCLIP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms