RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 CAMSAP1Q5T5Y3 1602 aa10.1□□□□□ -0.79
CPS1-202ENST00000417946 ACIN1Q9UKV3 1341 aaKnown RBP10.09□□□□□ -0.79
CPS1-202ENST00000417946 KIF3BO15066 747 aa10.08□□□□□ -0.8
CPS1-202ENST00000417946 SPHKAPQ2M3C7 1700 aa10.07□□□□□ -0.8
CPS1-202ENST00000417946 PKD2Q13563 968 aa10.06□□□□□ -0.8
CPS1-202ENST00000417946 MIER1Q8N108 512 aa10.06□□□□□ -0.8
CPS1-202ENST00000417946 SIN3AQ96ST3 1273 aa10.06□□□□□ -0.8
CPS1-202ENST00000417946 MYT1LQ9UL68 1186 aa10.06□□□□□ -0.8
CPS1-202ENST00000417946 TRPM2O94759 1503 aa10.06□□□□□ -0.8
CPS1-202ENST00000417946 PTPRTO14522 1441 aa10.06□□□□□ -0.8
CPS1-202ENST00000417946 RPRD2Q5VT52 1461 aaKnown RBP10.05□□□□□ -0.8
CPS1-202ENST00000417946 MNX1P50219 401 aaPredicted RBP10.05□□□□□ -0.8
CPS1-202ENST00000417946 NPATQ14207 1427 aa10.05□□□□□ -0.8
CPS1-202ENST00000417946 CLTCQ00610 1675 aaKnown RBP10.05□□□□□ -0.8
CPS1-202ENST00000417946 CLTCL1P53675 1640 aa10.04□□□□□ -0.8
CPS1-202ENST00000417946 SYNMO15061 1565 aa10.03□□□□□ -0.8
CPS1-202ENST00000417946 ARHGAP31Q2M1Z3 1444 aa10.03□□□□□ -0.8
CPS1-202ENST00000417946 PIK3C2BO00750 1634 aa10.03□□□□□ -0.8
CPS1-202ENST00000417946 PREX1Q8TCU6 1659 aa10.02□□□□□ -0.8
CPS1-202ENST00000417946 UGGT1Q9NYU2 1555 aa10.02□□□□□ -0.81
CPS1-202ENST00000417946 ZBTB47Q9UFB7 747 aaPredicted RBP10.02□□□□□ -0.81
CPS1-202ENST00000417946 KANK1Q14678 1352 aa10.01□□□□□ -0.81
CPS1-202ENST00000417946 NOS1P29475 1434 aa10.01□□□□□ -0.81
CPS1-202ENST00000417946 POTEIP0CG38 1075 aa10.01□□□□□ -0.81
CPS1-202ENST00000417946 MROH2AA6NES4 1674 aa10.01□□□□□ -0.81
CPS1-202ENST00000417946 CFAP65Q6ZU64 1925 aaKnown RBP10.01□□□□□ -0.81
CPS1-202ENST00000417946 GALR2O43603 387 aaPredicted RBP10□□□□□ -0.81
CPS1-202ENST00000417946 ZEB1P37275 1124 aaPredicted RBP10□□□□□ -0.81
CPS1-202ENST00000417946 GGT6Q6P531 493 aa10□□□□□ -0.81
CPS1-202ENST00000417946 PLCD3Q8N3E9 789 aa10□□□□□ -0.81
CPS1-202ENST00000417946 PHF12Q96QT6 1004 aa10□□□□□ -0.81
CPS1-202ENST00000417946 FER1L4A9Z1Z3 1794 aa10□□□□□ -0.81
CPS1-202ENST00000417946 ADAMTSL3P82987 1691 aa9.99□□□□□ -0.81
CPS1-202ENST00000417946 SPATA31D1Q6ZQQ2 1576 aa9.99□□□□□ -0.81
CPS1-202ENST00000417946 NEURL4Q96JN8 1562 aa9.99□□□□□ -0.81
CPS1-202ENST00000417946 SPATA31E1Q6ZUB1 1445 aa9.99□□□□□ -0.81
CPS1-202ENST00000417946 TSPYL2Q9H2G4 693 aaPredicted RBP9.98□□□□□ -0.81
CPS1-202ENST00000417946 CNTLNQ9NXG0 1405 aa9.98□□□□□ -0.81
CPS1-202ENST00000417946 ERVK-7P63135 1459 aa9.98□□□□□ -0.81
CPS1-202ENST00000417946 ADGRB3O60242 1522 aa9.97□□□□□ -0.81
CPS1-202ENST00000417946 MADDQ8WXG6 1647 aa9.97□□□□□ -0.81
CPS1-202ENST00000417946 IFT172Q9UG01 1749 aa9.97□□□□□ -0.81
CPS1-202ENST00000417946 C3P01024 1663 aa9.96□□□□□ -0.81
CPS1-202ENST00000417946 NEUROD1Q13562 356 aa9.96□□□□□ -0.82
CPS1-202ENST00000417946 WASHC2CQ9Y4E1 1318 aa9.96□□□□□ -0.82
CPS1-202ENST00000417946 CCDC144AA2RUR9 1427 aa9.96□□□□□ -0.82
CPS1-202ENST00000417946 MYO5BQ9ULV0 1848 aa9.96□□□□□ -0.82
CPS1-202ENST00000417946 KIF1BO60333 1816 aa9.95□□□□□ -0.82
CPS1-202ENST00000417946 RIMS1Q86UR5 1692 aaKnown RBP9.94□□□□□ -0.82
CPS1-202ENST00000417946 MLECQ14165 292 aa9.94□□□□□ -0.82
CPS1-202ENST00000417946 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
CPS1-202ENST00000417946 TIMELESSQ9UNS1 1208 aa9.94□□□□□ -0.82
CPS1-202ENST00000417946 TMEM131LA2VDJ0 1609 aa9.93□□□□□ -0.82
CPS1-202ENST00000417946 TONSLQ96HA7 1378 aa9.93□□□□□ -0.82
CPS1-202ENST00000417946 L3MBTL2Q969R5 705 aa9.93□□□□□ -0.82
CPS1-202ENST00000417946 PPLO60437 1756 aa9.93□□□□□ -0.82
CPS1-202ENST00000417946 PPP1R15AO75807 674 aaPredicted RBP9.92□□□□□ -0.82
CPS1-202ENST00000417946 FKBP8Q14318 412 aa9.92□□□□□ -0.82
CPS1-202ENST00000417946 UHRF1BP1Q6BDS2 1440 aa9.91□□□□□ -0.82
CPS1-202ENST00000417946 ZMYM3Q14202 1370 aa9.91□□□□□ -0.82
CPS1-202ENST00000417946 ARID4BQ4LE39 1312 aaPredicted RBP9.91□□□□□ -0.82
CPS1-202ENST00000417946 FBXO31Q5XUX0 539 aaPredicted RBP9.91□□□□□ -0.82
CPS1-202ENST00000417946 NEXMIFQ5QGS0 1516 aa9.9□□□□□ -0.82
CPS1-202ENST00000417946 NBPF8Q3BBV2 869 aa9.89□□□□□ -0.83
CPS1-202ENST00000417946 FBXO3Q9UK99 471 aa9.89□□□□□ -0.83
CPS1-202ENST00000417946 MYOM2P54296 1465 aa9.89□□□□□ -0.83
CPS1-202ENST00000417946 NRXN1Q9ULB1 1477 aa9.89□□□□□ -0.83
CPS1-202ENST00000417946 KDM5AP29375 1690 aaKnown RBP9.89□□□□□ -0.83
CPS1-202ENST00000417946 TRPM1Q7Z4N2 1603 aa9.89□□□□□ -0.83
CPS1-202ENST00000417946 MYO3AQ8NEV4 1616 aa9.89□□□□□ -0.83
CPS1-202ENST00000417946 UBR1Q8IWV7 1749 aa9.88□□□□□ -0.83
CPS1-202ENST00000417946 MS4A3Q96HJ5 214 aa9.88□□□□□ -0.83
CPS1-202ENST00000417946 PRAG1Q86YV5 1406 aa9.88□□□□□ -0.83
CPS1-202ENST00000417946 A2ML1A8K2U0 1454 aa9.87□□□□□ -0.83
CPS1-202ENST00000417946 RALGAPBQ86X10 1494 aa9.87□□□□□ -0.83
CPS1-202ENST00000417946 CCDC61Q9Y6R9 512 aa9.87□□□□□ -0.83
CPS1-202ENST00000417946 TNRQ92752 1358 aa9.87□□□□□ -0.83
CPS1-202ENST00000417946 IDI1Q13907 227 aa9.86□□□□□ -0.83
CPS1-202ENST00000417946 SLC39A7Q92504 469 aa9.86□□□□□ -0.83
CPS1-202ENST00000417946 ZNF142P52746 1687 aaPredicted RBP9.86□□□□□ -0.83
CPS1-202ENST00000417946 KIAA1210Q9ULL0 1709 aa9.85□□□□□ -0.83
CPS1-202ENST00000417946 C7P10643 843 aa9.85□□□□□ -0.83
CPS1-202ENST00000417946 CEBPAP49715 358 aaPredicted RBP9.85□□□□□ -0.83
CPS1-202ENST00000417946 ASTLQ6HA08 431 aaPredicted RBP9.85□□□□□ -0.83
CPS1-202ENST00000417946 LAMC1P11047 1609 aa9.85□□□□□ -0.83
CPS1-202ENST00000417946 SLC52A1Q9NWF4 448 aa9.84□□□□□ -0.83
CPS1-202ENST00000417946 SETD1AO15047 1707 aaKnown RBP9.84□□□□□ -0.83
CPS1-202ENST00000417946 PTPRMP28827 1452 aa9.84□□□□□ -0.83
CPS1-202ENST00000417946 NLRP1Q9C000 1473 aa9.84□□□□□ -0.83
CPS1-202ENST00000417946 ZFYVE9O95405 1425 aa9.83□□□□□ -0.84
CPS1-202ENST00000417946 NRXN3Q9Y4C0 1643 aa9.83□□□□□ -0.84
CPS1-202ENST00000417946 RGL3Q3MIN7 710 aa9.83□□□□□ -0.84
CPS1-202ENST00000417946 KIF12Q96FN5 646 aa9.83□□□□□ -0.84
CPS1-202ENST00000417946 GPRASP1Q5JY77 1395 aa9.83□□□□□ -0.84
CPS1-202ENST00000417946 DCAF11Q8TEB1 546 aa9.82□□□□□ -0.84
CPS1-202ENST00000417946 CEP170BQ9Y4F5 1589 aaPredicted RBP9.82□□□□□ -0.84
CPS1-202ENST00000417946 IQGAP1P46940 1657 aa9.82□□□□□ -0.84
CPS1-202ENST00000417946 ASXL1Q8IXJ9 1541 aa9.82□□□□□ -0.84
CPS1-202ENST00000417946 PIK3C2GO75747 1445 aa9.82□□□□□ -0.84
CPS1-202ENST00000417946 ADGRB1O14514 1584 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms