RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 KIAA1468Q9P260 1216 aa10.09□□□□□ -0.79
RFC4-204ENST00000417876 LIMD1Q9UGP4 676 aa10.08□□□□□ -0.8
RFC4-204ENST00000417876 DDX11L8A8MPP1 907 aa10.07□□□□□ -0.8
RFC4-204ENST00000417876 VARS2Q5ST30 1063 aaKnown RBP10.07□□□□□ -0.8
RFC4-204ENST00000417876 AXIN2Q9Y2T1 843 aa10.07□□□□□ -0.8
RFC4-204ENST00000417876 CLK2P49760 499 aaKnown RBP10.06□□□□□ -0.8
RFC4-204ENST00000417876 FLIIQ13045 1269 aa10.06□□□□□ -0.8
RFC4-204ENST00000417876 MMRN1Q13201 1228 aa10.06□□□□□ -0.8
RFC4-204ENST00000417876 DMRTA1Q5VZB9 504 aa10.06□□□□□ -0.8
RFC4-204ENST00000417876 SPNS2Q8IVW8 549 aa10.06□□□□□ -0.8
RFC4-204ENST00000417876 ERBB3P21860 1342 aa10.05□□□□□ -0.8
RFC4-204ENST00000417876 ARHGAP33O14559 1287 aa10.03□□□□□ -0.8
RFC4-204ENST00000417876 RIC3Q7Z5B4 369 aa10.03□□□□□ -0.8
RFC4-204ENST00000417876 SULF1Q8IWU6 871 aa10.03□□□□□ -0.8
RFC4-204ENST00000417876 ATP1B4Q9UN42 357 aaPredicted RBP10.03□□□□□ -0.8
RFC4-204ENST00000417876 MOXD2PA6NHM9 499 aa10.02□□□□□ -0.81
RFC4-204ENST00000417876 MCM6Q14566 821 aa10.02□□□□□ -0.81
RFC4-204ENST00000417876 CLUAP1Q96AJ1 413 aa10.02□□□□□ -0.81
RFC4-204ENST00000417876 NDUFV2P19404 249 aa10.01□□□□□ -0.81
RFC4-204ENST00000417876 DIXDC1Q155Q3 683 aa10.01□□□□□ -0.81
RFC4-204ENST00000417876 SEPT9Q9UHD8 586 aaPredicted RBP10.01□□□□□ -0.81
RFC4-204ENST00000417876 RABGEF1Q9UJ41 708 aa10.01□□□□□ -0.81
RFC4-204ENST00000417876 POTEB3A0JP26 581 aa10□□□□□ -0.81
RFC4-204ENST00000417876 SPTLC1O15269 473 aa10□□□□□ -0.81
RFC4-204ENST00000417876 SLC10A3P09131 477 aa10□□□□□ -0.81
RFC4-204ENST00000417876 RSBN1LQ6PCB5 846 aaPredicted RBP10□□□□□ -0.81
RFC4-204ENST00000417876 POTEBQ6S5H4 581 aa10□□□□□ -0.81
RFC4-204ENST00000417876 ARXQ96QS3 562 aa10□□□□□ -0.81
RFC4-204ENST00000417876 SLC4A5Q9BY07 1137 aa10□□□□□ -0.81
RFC4-204ENST00000417876 C1orf115Q9H7X2 142 aa10□□□□□ -0.81
RFC4-204ENST00000417876 RFC5P40937 340 aa9.99□□□□□ -0.81
RFC4-204ENST00000417876 SWT1Q5T5J6 900 aaKnown RBP9.99□□□□□ -0.81
RFC4-204ENST00000417876 NUTM1Q86Y26 1132 aa9.99□□□□□ -0.81
RFC4-204ENST00000417876 KCNH8Q96L42 1107 aa9.99□□□□□ -0.81
RFC4-204ENST00000417876 PCDHB15Q9Y5E8 787 aa9.99□□□□□ -0.81
RFC4-204ENST00000417876 EMP3P54852 163 aa9.98□□□□□ -0.81
RFC4-204ENST00000417876 PPP2R2DQ66LE6 453 aa9.98□□□□□ -0.81
RFC4-204ENST00000417876 RDH13Q8NBN7 331 aa9.98□□□□□ -0.81
RFC4-204ENST00000417876 VPS9D1Q9Y2B5 631 aa9.98□□□□□ -0.81
RFC4-204ENST00000417876 QPCTQ16769 361 aa9.97□□□□□ -0.81
RFC4-204ENST00000417876 ZNF687Q8N1G0 1237 aa9.97□□□□□ -0.81
RFC4-204ENST00000417876 SNRKQ9NRH2 765 aa9.97□□□□□ -0.81
RFC4-204ENST00000417876 FAM205CA6NFA0 338 aa9.96□□□□□ -0.82
RFC4-204ENST00000417876 ARID3CA6NKF2 412 aa9.96□□□□□ -0.82
RFC4-204ENST00000417876 GCGRP47871 477 aa9.96□□□□□ -0.82
RFC4-204ENST00000417876 CSPP1Q1MSJ5 1256 aa9.96□□□□□ -0.82
RFC4-204ENST00000417876 TUSC1Q2TAM9 212 aa9.96□□□□□ -0.82
RFC4-204ENST00000417876 POM121Q96HA1 1249 aa9.96□□□□□ -0.82
RFC4-204ENST00000417876 A6NJR5 290 aa9.95□□□□□ -0.82
RFC4-204ENST00000417876 KDM4AO75164 1064 aa9.95□□□□□ -0.82
RFC4-204ENST00000417876 BHMG1C9JSJ3 638 aaPredicted RBP9.94□□□□□ -0.82
RFC4-204ENST00000417876 LILRB3O75022 631 aa9.94□□□□□ -0.82
RFC4-204ENST00000417876 UBTFP17480 764 aaKnown RBP9.94□□□□□ -0.82
RFC4-204ENST00000417876 RTL5Q5HYW3 569 aaPredicted RBP9.94□□□□□ -0.82
RFC4-204ENST00000417876 HLA-CQ95604 372 aa9.94□□□□□ -0.82
RFC4-204ENST00000417876 PBX2P40425 430 aa9.93□□□□□ -0.82
RFC4-204ENST00000417876 HOXA2O43364 376 aa9.92□□□□□ -0.82
RFC4-204ENST00000417876 GJA5P36382 358 aa9.92□□□□□ -0.82
RFC4-204ENST00000417876 GUCA2AQ02747 115 aa9.92□□□□□ -0.82
RFC4-204ENST00000417876 FAM98CQ17RN3 349 aaKnown RBP9.92□□□□□ -0.82
RFC4-204ENST00000417876 CABLES1Q8TDN4 633 aa9.92□□□□□ -0.82
RFC4-204ENST00000417876 PCDHGC3Q9UN70 934 aa9.92□□□□□ -0.82
RFC4-204ENST00000417876 SPDYE5A6NIY4 337 aa9.91□□□□□ -0.82
RFC4-204ENST00000417876 TRAK2O60296 914 aa9.91□□□□□ -0.82
RFC4-204ENST00000417876 SAMD7Q7Z3H4 446 aa9.91□□□□□ -0.82
RFC4-204ENST00000417876 BANK1Q8NDB2 785 aa9.91□□□□□ -0.82
RFC4-204ENST00000417876 HS3ST6Q96QI5 342 aa9.91□□□□□ -0.82
RFC4-204ENST00000417876 KRTAP3-3Q9BYR6 98 aa9.91□□□□□ -0.82
RFC4-204ENST00000417876 KRTAP3-2Q9BYR7 98 aa9.91□□□□□ -0.82
RFC4-204ENST00000417876 TMEM259Q4ZIN3 620 aa9.9□□□□□ -0.82
RFC4-204ENST00000417876 FNBP4Q8N3X1 1017 aaPredicted RBP9.9□□□□□ -0.82
RFC4-204ENST00000417876 APBB1O00213 710 aa9.89□□□□□ -0.83
RFC4-204ENST00000417876 COG6Q9Y2V7 657 aa9.89□□□□□ -0.83
RFC4-204ENST00000417876 HRCP23327 699 aa9.88□□□□□ -0.83
RFC4-204ENST00000417876 USP46P62068 366 aa9.88□□□□□ -0.83
RFC4-204ENST00000417876 RSPH4AQ5TD94 716 aa9.88□□□□□ -0.83
RFC4-204ENST00000417876 HOMEZQ8IX15 550 aa9.88□□□□□ -0.83
RFC4-204ENST00000417876 MTMR14Q8NCE2 650 aa9.88□□□□□ -0.83
RFC4-204ENST00000417876 FDX1P10109 184 aa9.87□□□□□ -0.83
RFC4-204ENST00000417876 LAPTM4BQ86VI4 370 aa9.87□□□□□ -0.83
RFC4-204ENST00000417876 FUT2Q10981 343 aa9.86□□□□□ -0.83
RFC4-204ENST00000417876 PRPF38BQ5VTL8 546 aaKnown RBP9.86□□□□□ -0.83
RFC4-204ENST00000417876 ZFRQ96KR1 1074 aaKnown RBP9.86□□□□□ -0.83
RFC4-204ENST00000417876 NUTM2BA6NNL0 878 aaPredicted RBP9.85□□□□□ -0.83
RFC4-204ENST00000417876 NUTM2EB1AL46 878 aaPredicted RBP9.85□□□□□ -0.83
RFC4-204ENST00000417876 TK2O00142 265 aa9.85□□□□□ -0.83
RFC4-204ENST00000417876 AP1G2O75843 785 aa9.85□□□□□ -0.83
RFC4-204ENST00000417876 HDGFP51858 240 aaKnown RBP9.85□□□□□ -0.83
RFC4-204ENST00000417876 NUTM2DQ5VT03 806 aaPredicted RBP9.85□□□□□ -0.83
RFC4-204ENST00000417876 PROSER2Q86WR7 435 aaPredicted RBP9.85□□□□□ -0.83
RFC4-204ENST00000417876 NUTM2AQ8IVF1 878 aaPredicted RBP9.85□□□□□ -0.83
RFC4-204ENST00000417876 ARID3AQ99856 593 aa9.85□□□□□ -0.83
RFC4-204ENST00000417876 CFHP08603 1231 aa9.84□□□□□ -0.83
RFC4-204ENST00000417876 SLF2Q8IX21 1173 aa9.84□□□□□ -0.83
RFC4-204ENST00000417876 HRO43593 1189 aa9.83□□□□□ -0.84
RFC4-204ENST00000417876 ADGRD1Q6QNK2 874 aa9.83□□□□□ -0.84
RFC4-204ENST00000417876 NBPF3Q9H094 633 aa9.83□□□□□ -0.84
RFC4-204ENST00000417876 ZBTB3Q9H5J0 574 aa9.83□□□□□ -0.84
RFC4-204ENST00000417876 ZNF777Q9ULD5 760 aaPredicted RBP9.83□□□□□ -0.84
RFC4-204ENST00000417876 LSM11P83369 360 aaKnown RBP eCLIP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms