RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 SPINK5Q9NQ38 1064 aaPredicted RBP10.17□□□□□ -0.78
VRK2-203ENST00000417641 RNF17Q9BXT8 1623 aaKnown RBP10.17□□□□□ -0.78
VRK2-203ENST00000417641 EIF2AK4Q9P2K8 1649 aaKnown RBP10.17□□□□□ -0.78
VRK2-203ENST00000417641 MAGI1Q96QZ7 1491 aaPredicted RBP10.17□□□□□ -0.78
VRK2-203ENST00000417641 ABCC2Q92887 1545 aa10.17□□□□□ -0.78
VRK2-203ENST00000417641 UNC13BO14795 1591 aa10.17□□□□□ -0.78
VRK2-203ENST00000417641 ATP10AO60312 1499 aa10.16□□□□□ -0.78
VRK2-203ENST00000417641 IFT140Q96RY7 1462 aa10.16□□□□□ -0.78
VRK2-203ENST00000417641 NKTRP30414 1462 aaKnown RBP10.16□□□□□ -0.78
VRK2-203ENST00000417641 NPC1L1Q9UHC9 1359 aa10.16□□□□□ -0.78
VRK2-203ENST00000417641 MRC2Q9UBG0 1479 aa10.15□□□□□ -0.78
VRK2-203ENST00000417641 ATP10BO94823 1461 aa10.15□□□□□ -0.78
VRK2-203ENST00000417641 BCAR3O75815 825 aa10.15□□□□□ -0.79
VRK2-203ENST00000417641 HNRNPMP52272 730 aaKnown RBP eCLIP10.15□□□□□ -0.79
VRK2-203ENST00000417641 L1TD1Q5T7N2 865 aaKnown RBP10.15□□□□□ -0.79
VRK2-203ENST00000417641 DNAJC5BQ9UF47 199 aa10.15□□□□□ -0.79
VRK2-203ENST00000417641 FSD2A1L4K1 749 aa10.14□□□□□ -0.79
VRK2-203ENST00000417641 WDR43Q15061 677 aaKnown RBP eCLIP10.14□□□□□ -0.79
VRK2-203ENST00000417641 RGL3Q3MIN7 710 aa10.14□□□□□ -0.79
VRK2-203ENST00000417641 MAPK8IP3Q9UPT6 1336 aa10.14□□□□□ -0.79
VRK2-203ENST00000417641 ZMYM3Q14202 1370 aa10.14□□□□□ -0.79
VRK2-203ENST00000417641 PDE3AQ14432 1141 aa10.14□□□□□ -0.79
VRK2-203ENST00000417641 PLEKHD1A6NEE1 506 aa10.13□□□□□ -0.79
VRK2-203ENST00000417641 SYNMO15061 1565 aa10.13□□□□□ -0.79
VRK2-203ENST00000417641 MYO5CQ9NQX4 1742 aa10.13□□□□□ -0.79
VRK2-203ENST00000417641 SAMD9LQ8IVG5 1584 aa10.13□□□□□ -0.79
VRK2-203ENST00000417641 MAST1Q9Y2H9 1570 aa10.13□□□□□ -0.79
VRK2-203ENST00000417641 ASXL1Q8IXJ9 1541 aa10.13□□□□□ -0.79
VRK2-203ENST00000417641 CGNL1Q0VF96 1302 aa10.13□□□□□ -0.79
VRK2-203ENST00000417641 BECN1Q14457 450 aa10.12□□□□□ -0.79
VRK2-203ENST00000417641 NINLQ9Y2I6 1382 aa10.12□□□□□ -0.79
VRK2-203ENST00000417641 IQGAP3Q86VI3 1631 aa10.12□□□□□ -0.79
VRK2-203ENST00000417641 PLXNC1O60486 1568 aa10.12□□□□□ -0.79
VRK2-203ENST00000417641 E9PSI1 815 aa10.11□□□□□ -0.79
VRK2-203ENST00000417641 XRCC6P12956 609 aaKnown RBP eCLIP10.11□□□□□ -0.79
VRK2-203ENST00000417641 KNSTRNQ9Y448 316 aa10.11□□□□□ -0.79
VRK2-203ENST00000417641 DMRT2Q9Y5R5 561 aa10.11□□□□□ -0.79
VRK2-203ENST00000417641 IQGAP1P46940 1657 aa10.11□□□□□ -0.79
VRK2-203ENST00000417641 ADRA2BP18089 450 aa10.11□□□□□ -0.79
VRK2-203ENST00000417641 RSPH4AQ5TD94 716 aa10.11□□□□□ -0.79
VRK2-203ENST00000417641 CLUAP1Q96AJ1 413 aa10.11□□□□□ -0.79
VRK2-203ENST00000417641 TBC1D32Q96NH3 1257 aa10.11□□□□□ -0.79
VRK2-203ENST00000417641 APAF1O14727 1248 aa10.1□□□□□ -0.79
VRK2-203ENST00000417641 TBC1D2Q9BYX2 928 aa10.1□□□□□ -0.79
VRK2-203ENST00000417641 SCAPERQ9BY12 1400 aa10.1□□□□□ -0.79
VRK2-203ENST00000417641 CLCN1P35523 988 aa10.09□□□□□ -0.79
VRK2-203ENST00000417641 NGEFQ8N5V2 710 aa10.09□□□□□ -0.79
VRK2-203ENST00000417641 SLKQ9H2G2 1235 aaPredicted RBP10.09□□□□□ -0.79
VRK2-203ENST00000417641 CARMIL2Q6F5E8 1435 aa10.09□□□□□ -0.79
VRK2-203ENST00000417641 MYOM1P52179 1685 aa10.09□□□□□ -0.79
VRK2-203ENST00000417641 CCDC146Q8IYE0 955 aa10.09□□□□□ -0.79
VRK2-203ENST00000417641 MADDQ8WXG6 1647 aa10.08□□□□□ -0.8
VRK2-203ENST00000417641 RTEL1-TNFRSF6BF6WH68 1400 aa10.08□□□□□ -0.8
VRK2-203ENST00000417641 PPP6R1Q9UPN7 881 aa10.08□□□□□ -0.8
VRK2-203ENST00000417641 PREX2Q70Z35 1606 aa10.08□□□□□ -0.8
VRK2-203ENST00000417641 CDC42BPBQ9Y5S2 1711 aa10.07□□□□□ -0.8
VRK2-203ENST00000417641 JPH4Q96JJ6 628 aa10.07□□□□□ -0.8
VRK2-203ENST00000417641 MCM4P33991 863 aa10.07□□□□□ -0.8
VRK2-203ENST00000417641 AAMPQ13685 434 aa10.07□□□□□ -0.8
VRK2-203ENST00000417641 PANK1Q8TE04 598 aa10.07□□□□□ -0.8
VRK2-203ENST00000417641 COG6Q9Y2V7 657 aa10.07□□□□□ -0.8
VRK2-203ENST00000417641 SCAF11Q99590 1463 aaKnown RBP10.07□□□□□ -0.8
VRK2-203ENST00000417641 CENPJQ9HC77 1338 aaPredicted RBP10.06□□□□□ -0.8
VRK2-203ENST00000417641 GOLGA6L3A6NEY3 463 aa10.06□□□□□ -0.8
VRK2-203ENST00000417641 CDCA8Q53HL2 280 aa10.06□□□□□ -0.8
VRK2-203ENST00000417641 PCDHB15Q9Y5E8 787 aa10.06□□□□□ -0.8
VRK2-203ENST00000417641 PMFBP1Q8TBY8 1022 aa10.05□□□□□ -0.8
VRK2-203ENST00000417641 PANK2Q9BZ23 570 aa10.05□□□□□ -0.8
VRK2-203ENST00000417641 PDZRN3Q9UPQ7 1066 aa10.05□□□□□ -0.8
VRK2-203ENST00000417641 DUOX2Q9NRD8 1548 aa10.04□□□□□ -0.8
VRK2-203ENST00000417641 WWC1Q8IX03 1113 aa10.04□□□□□ -0.8
VRK2-203ENST00000417641 SYCP2Q9BX26 1530 aa10.04□□□□□ -0.8
VRK2-203ENST00000417641 ZNF692Q9BU19 519 aaPredicted RBP10.04□□□□□ -0.8
VRK2-203ENST00000417641 RARSP54136 660 aaKnown RBP10.03□□□□□ -0.8
VRK2-203ENST00000417641 POLR3AO14802 1390 aaPredicted RBP10.03□□□□□ -0.8
VRK2-203ENST00000417641 RLBP1P12271 317 aa10.02□□□□□ -0.8
VRK2-203ENST00000417641 DDIT3P35638 169 aa10.02□□□□□ -0.8
VRK2-203ENST00000417641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.02□□□□□ -0.89e-6■□□□□ 10.7
VRK2-203ENST00000417641 IQSEC2Q5JU85 1478 aa10.02□□□□□ -0.81
VRK2-203ENST00000417641 MRE11P49959 708 aa10.02□□□□□ -0.81
VRK2-203ENST00000417641 PNNQ9H307 717 aaKnown RBP10.02□□□□□ -0.81
VRK2-203ENST00000417641 CHMP5Q9NZZ3 219 aa10.02□□□□□ -0.81
VRK2-203ENST00000417641 TNNQ9UQP3 1299 aa10.02□□□□□ -0.81
VRK2-203ENST00000417641 NCOA3Q9Y6Q9 1424 aa10.01□□□□□ -0.81
VRK2-203ENST00000417641 TTC37Q6PGP7 1564 aa10.01□□□□□ -0.81
VRK2-203ENST00000417641 TRAK2O60296 914 aa10.01□□□□□ -0.81
VRK2-203ENST00000417641 CHMP7Q8WUX9 453 aaPredicted RBP10.01□□□□□ -0.81
VRK2-203ENST00000417641 STAC3Q96MF2 364 aa10.01□□□□□ -0.81
VRK2-203ENST00000417641 CARD14Q9BXL6 1004 aa10.01□□□□□ -0.81
VRK2-203ENST00000417641 UPF2Q9HAU5 1272 aaKnown RBP10.01□□□□□ -0.81
VRK2-203ENST00000417641 SPHKAPQ2M3C7 1700 aa10.01□□□□□ -0.81
VRK2-203ENST00000417641 KANK1Q14678 1352 aa10.01□□□□□ -0.81
VRK2-203ENST00000417641 RRP9O43818 475 aaKnown RBP10.01□□□□□ -0.81
VRK2-203ENST00000417641 PKNOX2Q96KN3 472 aa10.01□□□□□ -0.81
VRK2-203ENST00000417641 ISY1Q9ULR0 285 aaKnown RBP10□□□□□ -0.81
VRK2-203ENST00000417641 PTPRTO14522 1441 aa10□□□□□ -0.81
VRK2-203ENST00000417641 ERVK-7P63135 1459 aa10□□□□□ -0.81
VRK2-203ENST00000417641 CEP152O94986 1710 aa10□□□□□ -0.81
VRK2-203ENST00000417641 NAP1L5Q96NT1 182 aaPredicted RBP10□□□□□ -0.81
VRK2-203ENST00000417641 SHPRHQ149N8 1683 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms