RNA–Protein interactions for RNA: ENST00000416248.5

HDAC11-208, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-208ENST00000416248 POTEAQ6S8J7 498 aa29.83■■■□□ 2.37
HDAC11-208ENST00000416248 RPRD2Q5VT52 1461 aaKnown RBP29.82■■■□□ 2.36
HDAC11-208ENST00000416248 MSH6P52701 1360 aa29.82■■■□□ 2.36
HDAC11-208ENST00000416248 BCANQ96GW7 911 aa29.8■■■□□ 2.36
HDAC11-208ENST00000416248 MYO5BQ9ULV0 1848 aa29.8■■■□□ 2.36
HDAC11-208ENST00000416248 PHLPP1O60346 1717 aa29.79■■■□□ 2.36
HDAC11-208ENST00000416248 ZFYVE9O95405 1425 aa29.79■■■□□ 2.36
HDAC11-208ENST00000416248 CHD2O14647 1828 aaKnown RBP29.78■■■□□ 2.36
HDAC11-208ENST00000416248 PLEKHG1Q9ULL1 1385 aa29.77■■■□□ 2.36
HDAC11-208ENST00000416248 GCC2Q8IWJ2 1684 aa29.76■■■□□ 2.36
HDAC11-208ENST00000416248 SLAIN2Q9P270 581 aa29.76■■■□□ 2.35
HDAC11-208ENST00000416248 ANKRD50Q9ULJ7 1429 aa29.74■■■□□ 2.35
HDAC11-208ENST00000416248 TMEM131LA2VDJ0 1609 aa29.74■■■□□ 2.35
HDAC11-208ENST00000416248 RIMS2Q9UQ26 1411 aa29.72■■■□□ 2.35
HDAC11-208ENST00000416248 JCADQ9P266 1359 aa29.71■■■□□ 2.35
HDAC11-208ENST00000416248 HDGFP51858 240 aaKnown RBP29.7■■■□□ 2.35
HDAC11-208ENST00000416248 PPP1R15AO75807 674 aaPredicted RBP29.69■■■□□ 2.34
HDAC11-208ENST00000416248 COL16A1Q07092 1604 aaPredicted RBP29.67■■■□□ 2.34
HDAC11-208ENST00000416248 SETD1AO15047 1707 aaKnown RBP29.66■■■□□ 2.34
HDAC11-208ENST00000416248 NCOA3Q9Y6Q9 1424 aa29.66■■■□□ 2.34
HDAC11-208ENST00000416248 FAM50AQ14320 339 aaKnown RBP29.66■■■□□ 2.34
HDAC11-208ENST00000416248 TBX22Q9Y458 520 aa29.65■■■□□ 2.34
HDAC11-208ENST00000416248 UNC13BO14795 1591 aa29.64■■■□□ 2.33
HDAC11-208ENST00000416248 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.61■■■□□ 2.33
HDAC11-208ENST00000416248 DIP2AQ14689 1571 aa29.6■■■□□ 2.33
HDAC11-208ENST00000416248 ADAMTS13Q76LX8 1427 aa29.6■■■□□ 2.33
HDAC11-208ENST00000416248 E9PCH4 1651 aa29.6■■■□□ 2.33
HDAC11-208ENST00000416248 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.59■■■□□ 2.33
HDAC11-208ENST00000416248 C14orf37Q86TY3 774 aa29.58■■■□□ 2.33
HDAC11-208ENST00000416248 CHGAP10645 457 aaKnown RBP29.57■■■□□ 2.32
HDAC11-208ENST00000416248 LRP6O75581 1613 aa29.56■■■□□ 2.32
HDAC11-208ENST00000416248 PIK3R4Q99570 1358 aa29.56■■■□□ 2.32
HDAC11-208ENST00000416248 SPATA31A6Q5VVP1 1343 aa29.56■■■□□ 2.32
HDAC11-208ENST00000416248 AHDC1Q5TGY3 1603 aaPredicted RBP29.56■■■□□ 2.32
HDAC11-208ENST00000416248 NUTM2DQ5VT03 806 aaPredicted RBP29.54■■■□□ 2.32
HDAC11-208ENST00000416248 CADPS2Q86UW7 1296 aa29.54■■■□□ 2.32
HDAC11-208ENST00000416248 C19orf44Q9H6X5 657 aa29.54■■■□□ 2.32
HDAC11-208ENST00000416248 SHPRHQ149N8 1683 aa29.53■■■□□ 2.32
HDAC11-208ENST00000416248 IQGAP3Q86VI3 1631 aa29.53■■■□□ 2.32
HDAC11-208ENST00000416248 ATF3P18847 181 aa29.51■■■□□ 2.31
HDAC11-208ENST00000416248 TRPM2O94759 1503 aa29.5■■■□□ 2.31
HDAC11-208ENST00000416248 MEX3CQ5U5Q3 659 aaKnown RBP29.49■■■□□ 2.31
HDAC11-208ENST00000416248 ZNF772Q68DY9 489 aaPredicted RBP29.48■■■□□ 2.31
HDAC11-208ENST00000416248 ROCK1Q13464 1354 aa29.47■■■□□ 2.31
HDAC11-208ENST00000416248 PTPRUQ92729 1446 aa29.45■■■□□ 2.3
HDAC11-208ENST00000416248 AMOTL2Q9Y2J4 779 aa29.44■■■□□ 2.3
HDAC11-208ENST00000416248 BRINP3Q76B58 766 aa29.42■■■□□ 2.3
HDAC11-208ENST00000416248 DCCP43146 1447 aa29.42■■■□□ 2.3
HDAC11-208ENST00000416248 XRN1Q8IZH2 1706 aaKnown RBP29.4■■■□□ 2.3
HDAC11-208ENST00000416248 NUP155O75694 1391 aa29.39■■■□□ 2.3
HDAC11-208ENST00000416248 NRXN3Q9Y4C0 1643 aa29.39■■■□□ 2.3
HDAC11-208ENST00000416248 TRIM52Q96A61 297 aa29.39■■■□□ 2.3
HDAC11-208ENST00000416248 UPF1Q92900 1129 aaKnown RBP eCLIP29.38■■■□□ 2.29
HDAC11-208ENST00000416248 ASXL1Q8IXJ9 1541 aa29.37■■■□□ 2.29
HDAC11-208ENST00000416248 SETBP1Q9Y6X0 1596 aa29.37■■■□□ 2.29
HDAC11-208ENST00000416248 RXRBP28702 533 aa29.33■■■□□ 2.29
HDAC11-208ENST00000416248 NHSL1Q5SYE7 1610 aa29.33■■■□□ 2.29
HDAC11-208ENST00000416248 SPHKAPQ2M3C7 1700 aa29.33■■■□□ 2.29
HDAC11-208ENST00000416248 MST1RQ04912 1400 aa29.32■■■□□ 2.28
HDAC11-208ENST00000416248 SETD5Q9C0A6 1442 aa29.32■■■□□ 2.28
HDAC11-208ENST00000416248 NUTM2BA6NNL0 878 aaPredicted RBP29.32■■■□□ 2.28
HDAC11-208ENST00000416248 NUTM2EB1AL46 878 aaPredicted RBP29.32■■■□□ 2.28
HDAC11-208ENST00000416248 NUTM2AQ8IVF1 878 aaPredicted RBP29.32■■■□□ 2.28
HDAC11-208ENST00000416248 CDK12Q9NYV4 1490 aaPredicted RBP29.31■■■□□ 2.28
HDAC11-208ENST00000416248 METP08581 1390 aa29.27■■■□□ 2.28
HDAC11-208ENST00000416248 AFF2P51816 1311 aa29.26■■■□□ 2.27
HDAC11-208ENST00000416248 ITGAEP38570 1179 aa29.24■■■□□ 2.27
HDAC11-208ENST00000416248 ZNF326Q5BKZ1 582 aaKnown RBP29.24■■■□□ 2.27
HDAC11-208ENST00000416248 LRRC59Q96AG4 307 aaKnown RBP29.24■■■□□ 2.27
HDAC11-208ENST00000416248 ADGRL3Q9HAR2 1447 aa29.24■■■□□ 2.27
HDAC11-208ENST00000416248 NALCNQ8IZF0 1738 aa29.23■■■□□ 2.27
HDAC11-208ENST00000416248 NEXMIFQ5QGS0 1516 aa29.2■■■□□ 2.26
HDAC11-208ENST00000416248 PNPLA6Q8IY17 1366 aa29.19■■■□□ 2.26
HDAC11-208ENST00000416248 CLTCL1P53675 1640 aa29.18■■■□□ 2.26
HDAC11-208ENST00000416248 DDX17Q92841 729 aaKnown RBP29.17■■■□□ 2.26
HDAC11-208ENST00000416248 C8orf37Q96NL8 207 aa29.16■■■□□ 2.26
HDAC11-208ENST00000416248 RGS12O14924 1447 aa29.14■■■□□ 2.26
HDAC11-208ENST00000416248 KIF1BO60333 1816 aa29.13■■■□□ 2.25
HDAC11-208ENST00000416248 LAMC1P11047 1609 aa29.12■■■□□ 2.25
HDAC11-208ENST00000416248 RBM6P78332 1123 aaKnown RBP29.12■■■□□ 2.25
HDAC11-208ENST00000416248 QTRT2Q9H974 415 aaKnown RBP29.12■■■□□ 2.25
HDAC11-208ENST00000416248 C1orf167Q5SNV9 1468 aa29.11■■■□□ 2.25
HDAC11-208ENST00000416248 PTCH1Q13635 1447 aa29.09■■■□□ 2.25
HDAC11-208ENST00000416248 NGLY1Q96IV0 654 aa29.05■■■□□ 2.24
HDAC11-208ENST00000416248 ADAMTS2O95450 1211 aa29.04■■■□□ 2.24
HDAC11-208ENST00000416248 ROBO2Q9HCK4 1378 aa29.03■■■□□ 2.24
HDAC11-208ENST00000416248 SOS2Q07890 1332 aaPredicted RBP29.03■■■□□ 2.24
HDAC11-208ENST00000416248 PRAG1Q86YV5 1406 aa29.02■■■□□ 2.24
HDAC11-208ENST00000416248 PPARGC1BQ86YN6 1023 aaKnown RBP29.01■■■□□ 2.23
HDAC11-208ENST00000416248 VGFO15240 615 aaPredicted RBP29■■■□□ 2.23
HDAC11-208ENST00000416248 ORAI2Q96SN7 254 aa29■■■□□ 2.23
HDAC11-208ENST00000416248 NAIPQ13075 1403 aa28.97■■■□□ 2.23
HDAC11-208ENST00000416248 COL22A1Q8NFW1 1626 aaPredicted RBP28.97■■■□□ 2.23
HDAC11-208ENST00000416248 USP21Q9UK80 565 aa28.96■■■□□ 2.23
HDAC11-208ENST00000416248 ATAD2Q6PL18 1390 aa28.95■■■□□ 2.22
HDAC11-208ENST00000416248 HFM1A2PYH4 1435 aa28.94■■■□□ 2.22
HDAC11-208ENST00000416248 RPGRIP1LQ68CZ1 1315 aa28.94■■■□□ 2.22
HDAC11-208ENST00000416248 PPLO60437 1756 aa28.93■■■□□ 2.22
HDAC11-208ENST00000416248 TRPC5Q9UL62 973 aaPredicted RBP28.93■■■□□ 2.22
HDAC11-208ENST00000416248 FNBP4Q8N3X1 1017 aaPredicted RBP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms